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The map label for this gene is ydfM [H]

Identifier: 220931251

GI number: 220931251

Start: 419106

End: 419984

Strand: Direct

Name: ydfM [H]

Synonym: Hore_04060

Alternate gene names: 220931251

Gene position: 419106-419984 (Clockwise)

Preceding gene: 220931250

Following gene: 220931252

Centisome position: 16.26

GC content: 40.27

Gene sequence:

>879_bases
ATGATGGAGGAAGAGAGATATAGAGAAACCAGGAAGGTCAGCTTTATTAGTATTGTTATCAATATAATATTATCAGTAGC
AAAAATATTTATAGGTATCAGTTTTGCCAGTAAAGCATTACTGGCTGATGGGGTACATTCTGTTTCCGATATTGCCTCAA
CGGTTGTGGTCTTAATAAGTATTAAGTTTTCCCAGAATCCAGCAGATGAAAGACACCCCTACGGTCATGGAAAAGCGGAA
CAAATAGGGACTGCTCTCCTTGGTCTTATGCTGTTAATTACGGGTTTAACTTTAATAAAAGATACGGCTGGAAATATGAT
AACAGGTGAAATAACTGTTCCCGGGCAGATTACCCTGTGGATAGCCTTAATTTCAATTATAAGTAAAGAAGCCCTGTATC
AGTACACGGTTAAGATTGGTAAGAAAATAAACAGTAAAGGTTTGGTTGCCGATGCCCACCACCACCGGTCAGATGCCCTG
TCTTCTGTGGCTGCCCTTGCAGGTATTGCCGGGGCCCGACTTGGATATCCGTTCCTCGACCCCCTGGCCGGTTTGATAGT
AGCCCTCCTTATTATTAAAATCAGTATAGAAATTATAAAAGAAGCTGTTCATGAGCTAATGGATGGAATTCCTGATGAAG
ATAAGATAGTTAAAATCAGAAAAATAGCAGAGAATGTCAGTGGAGTAAAAGATATAGGTGATATAAAGATTCGCTCCTAT
GGCCCCCACCTTATTGTGGACCTGACTGTTGCTGTTGATAAAAACTTAAAAGTAATTGAGGGACATCAGGTGGCAGCAAA
TATTAAAAACGAATTACTGAATAGTGATTCTAATGTGGAGGATGTTCTGGTTCATGTTGACCCCTGGCAGGAAGGATAG

Upstream 100 bases:

>100_bases
GTTAGTTATATCAAACTAACTAATATATGCATATATTATATAAGAGTTAATATATCCACTATAAGGGTTAATATATCCAT
GTAAAAAAAGGAGTGTTTTT

Downstream 100 bases:

>100_bases
TTCCTTCCCTGTAAGGGTTTTTTTTTAAGCAATTTTGTACATGGGTAGTTGACAAGTCGTTATTAAAATATTATACTTGT
ATATACAAGATACTTATCTA

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MMEEERYRETRKVSFISIVINIILSVAKIFIGISFASKALLADGVHSVSDIASTVVVLISIKFSQNPADERHPYGHGKAE
QIGTALLGLMLLITGLTLIKDTAGNMITGEITVPGQITLWIALISIISKEALYQYTVKIGKKINSKGLVADAHHHRSDAL
SSVAALAGIAGARLGYPFLDPLAGLIVALLIIKISIEIIKEAVHELMDGIPDEDKIVKIRKIAENVSGVKDIGDIKIRSY
GPHLIVDLTVAVDKNLKVIEGHQVAANIKNELLNSDSNVEDVLVHVDPWQEG

Sequences:

>Translated_292_residues
MMEEERYRETRKVSFISIVINIILSVAKIFIGISFASKALLADGVHSVSDIASTVVVLISIKFSQNPADERHPYGHGKAE
QIGTALLGLMLLITGLTLIKDTAGNMITGEITVPGQITLWIALISIISKEALYQYTVKIGKKINSKGLVADAHHHRSDAL
SSVAALAGIAGARLGYPFLDPLAGLIVALLIIKISIEIIKEAVHELMDGIPDEDKIVKIRKIAENVSGVKDIGDIKIRSY
GPHLIVDLTVAVDKNLKVIEGHQVAANIKNELLNSDSNVEDVLVHVDPWQEG
>Mature_292_residues
MMEEERYRETRKVSFISIVINIILSVAKIFIGISFASKALLADGVHSVSDIASTVVVLISIKFSQNPADERHPYGHGKAE
QIGTALLGLMLLITGLTLIKDTAGNMITGEITVPGQITLWIALISIISKEALYQYTVKIGKKINSKGLVADAHHHRSDAL
SSVAALAGIAGARLGYPFLDPLAGLIVALLIIKISIEIIKEAVHELMDGIPDEDKIVKIRKIAENVSGVKDIGDIKIRSY
GPHLIVDLTVAVDKNLKVIEGHQVAANIKNELLNSDSNVEDVLVHVDPWQEG

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=270, Percent_Identity=27.4074074074074, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI115533508, Length=278, Percent_Identity=23.7410071942446, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115533506, Length=278, Percent_Identity=23.7410071942446, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6325032, Length=283, Percent_Identity=31.095406360424, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6323831, Length=319, Percent_Identity=30.7210031347962, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 31568; Mature: 31568

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEEERYRETRKVSFISIVINIILSVAKIFIGISFASKALLADGVHSVSDIASTVVVLIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IKFSQNPADERHPYGHGKAEQIGTALLGLMLLITGLTLIKDTAGNMITGEITVPGQITLW
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
IALISIISKEALYQYTVKIGKKINSKGLVADAHHHRSDALSSVAALAGIAGARLGYPFLD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PLAGLIVALLIIKISIEIIKEAVHELMDGIPDEDKIVKIRKIAENVSGVKDIGDIKIRSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCEEEECC
GPHLIVDLTVAVDKNLKVIEGHQVAANIKNELLNSDSNVEDVLVHVDPWQEG
CCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MMEEERYRETRKVSFISIVINIILSVAKIFIGISFASKALLADGVHSVSDIASTVVVLIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IKFSQNPADERHPYGHGKAEQIGTALLGLMLLITGLTLIKDTAGNMITGEITVPGQITLW
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
IALISIISKEALYQYTVKIGKKINSKGLVADAHHHRSDALSSVAALAGIAGARLGYPFLD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PLAGLIVALLIIKISIEIIKEAVHELMDGIPDEDKIVKIRKIAENVSGVKDIGDIKIRSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCEEEECC
GPHLIVDLTVAVDKNLKVIEGHQVAANIKNELLNSDSNVEDVLVHVDPWQEG
CCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]