| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqkF [H]
Identifier: 220931241
GI number: 220931241
Start: 405278
End: 406216
Strand: Direct
Name: yqkF [H]
Synonym: Hore_03950
Alternate gene names: 220931241
Gene position: 405278-406216 (Clockwise)
Preceding gene: 220931240
Following gene: 220931243
Centisome position: 15.72
GC content: 40.68
Gene sequence:
>939_bases ATGTTGAAGAAGAGGAAACTGGGAACAACTGGCCTTGAAGTTTCTGAAATTGGTTTTGGATGCTGGCAGCTGGGAAACAC GAAAGACTGGCGTGGTGCTACCGGTGAAGATGCAATCCGGTTGGTCCATAAGGCTATTGAAATGGGGTGTAATTTTTTTG ATACAGCTCCCAATTATGCCGGGGGAAAGAGTGAGGAATTACTGGGTAAAGCCCTTAAAGGTAAAAGGGATAAAGTTATT ATTAGTTCAAAATTTGGGCATACCCCTGATGGTCAGACCAGTTTTGACCCGTCTTTATTGAAAAAATCTGTAGAAGAAAG TTTGGGAAGGCTAGAGACAGATTATTTAGATATATTGTTACTCCATAGTCCTCCCGTGGAAGTAATAAAGGGGAGTCAGG GACATTATCAAATTATGGAGGAGCTTAAAAAGGAAGGAAAAATACGTTTCTATGGGGCTTCAGTTGACACCGGTCAGCAA ATGCTGGATGTTATAAATAACAGCAACTCTAGCGTTATTGAAATTCTTTTTAATCTTTTCCACCAGGAGCCCAGGAGGGT TTTCCCGAGGGCTGGAGAAGAAGGTGTGGGGTTAATTGTTAAAGTTCCACTGGATTCGGGATGGCTCACCGGTAAGTATA ATGCCGACAGTACTTTTACAGGAATCAGGGAACGGTGGAGTAGAGAAGTTATTAAACGGAGGGCCTCACTGGTGGAAATG GTTAAGGACATAAAGGATGATAATACCAGTATGGTTCATGAGGCTTTAAAATATATTCTGGCTTATCCACAGGTATCAAC AGTCATTCCAGGTGTTAGAACTGAAGAGCACTTAATTGAAAACTTTAAGGCAAGTGAAAGAAAACTATCTGATGATAGAT TAAGGAAATATGAAGATTTATACAATAAATATATTGAGGGTAATGAGCTGCCCTGGTAA
Upstream 100 bases:
>100_bases ACAAGAACTGATAAATAAAAAGTTAAAAAATGAACTTAAATATAAATTTAAAAAGCCCGGGCATGATTCAGATAAGGGCT GTTTTAAAAAGGGGGAAGTT
Downstream 100 bases:
>100_bases AGTCCCCTACAAAAAAATATATTTATAAATATCGGGTTTTATACAGCTATAAAAAACCTCCAGATTCTTCTGGAGGTTAT AATTTTTTTCTTGTTATTTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLKKRKLGTTGLEVSEIGFGCWQLGNTKDWRGATGEDAIRLVHKAIEMGCNFFDTAPNYAGGKSEELLGKALKGKRDKVI ISSKFGHTPDGQTSFDPSLLKKSVEESLGRLETDYLDILLLHSPPVEVIKGSQGHYQIMEELKKEGKIRFYGASVDTGQQ MLDVINNSNSSVIEILFNLFHQEPRRVFPRAGEEGVGLIVKVPLDSGWLTGKYNADSTFTGIRERWSREVIKRRASLVEM VKDIKDDNTSMVHEALKYILAYPQVSTVIPGVRTEEHLIENFKASERKLSDDRLRKYEDLYNKYIEGNELPW
Sequences:
>Translated_312_residues MLKKRKLGTTGLEVSEIGFGCWQLGNTKDWRGATGEDAIRLVHKAIEMGCNFFDTAPNYAGGKSEELLGKALKGKRDKVI ISSKFGHTPDGQTSFDPSLLKKSVEESLGRLETDYLDILLLHSPPVEVIKGSQGHYQIMEELKKEGKIRFYGASVDTGQQ MLDVINNSNSSVIEILFNLFHQEPRRVFPRAGEEGVGLIVKVPLDSGWLTGKYNADSTFTGIRERWSREVIKRRASLVEM VKDIKDDNTSMVHEALKYILAYPQVSTVIPGVRTEEHLIENFKASERKLSDDRLRKYEDLYNKYIEGNELPW >Mature_312_residues MLKKRKLGTTGLEVSEIGFGCWQLGNTKDWRGATGEDAIRLVHKAIEMGCNFFDTAPNYAGGKSEELLGKALKGKRDKVI ISSKFGHTPDGQTSFDPSLLKKSVEESLGRLETDYLDILLLHSPPVEVIKGSQGHYQIMEELKKEGKIRFYGASVDTGQQ MLDVINNSNSSVIEILFNLFHQEPRRVFPRAGEEGVGLIVKVPLDSGWLTGKYNADSTFTGIRERWSREVIKRRASLVEM VKDIKDDNTSMVHEALKYILAYPQVSTVIPGVRTEEHLIENFKASERKLSDDRLRKYEDLYNKYIEGNELPW
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=312, Percent_Identity=28.2051282051282, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436966, Length=312, Percent_Identity=27.8846153846154, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI27436962, Length=309, Percent_Identity=28.1553398058252, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27436971, Length=319, Percent_Identity=26.9592476489028, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI27436969, Length=309, Percent_Identity=25.2427184466019, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=25.2427184466019, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081735, Length=329, Percent_Identity=27.0516717325228, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788070, Length=318, Percent_Identity=27.0440251572327, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1789375, Length=318, Percent_Identity=26.7295597484277, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788081, Length=295, Percent_Identity=24.7457627118644, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87082198, Length=144, Percent_Identity=31.9444444444444, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI24646155, Length=333, Percent_Identity=29.1291291291291, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24646159, Length=163, Percent_Identity=34.3558282208589, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35283; Mature: 35283
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKRKLGTTGLEVSEIGFGCWQLGNTKDWRGATGEDAIRLVHKAIEMGCNFFDTAPNYA CCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCC GGKSEELLGKALKGKRDKVIISSKFGHTPDGQTSFDPSLLKKSVEESLGRLETDYLDILL CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE LHSPPVEVIKGSQGHYQIMEELKKEGKIRFYGASVDTGQQMLDVINNSNSSVIEILFNLF ECCCCHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH HQEPRRVFPRAGEEGVGLIVKVPLDSGWLTGKYNADSTFTGIRERWSREVIKRRASLVEM HHCHHHHCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKDIKDDNTSMVHEALKYILAYPQVSTVIPGVRTEEHLIENFKASERKLSDDRLRKYEDL HHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH YNKYIEGNELPW HHHHCCCCCCCC >Mature Secondary Structure MLKKRKLGTTGLEVSEIGFGCWQLGNTKDWRGATGEDAIRLVHKAIEMGCNFFDTAPNYA CCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCC GGKSEELLGKALKGKRDKVIISSKFGHTPDGQTSFDPSLLKKSVEESLGRLETDYLDILL CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE LHSPPVEVIKGSQGHYQIMEELKKEGKIRFYGASVDTGQQMLDVINNSNSSVIEILFNLF ECCCCHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH HQEPRRVFPRAGEEGVGLIVKVPLDSGWLTGKYNADSTFTGIRERWSREVIKRRASLVEM HHCHHHHCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKDIKDDNTSMVHEALKYILAYPQVSTVIPGVRTEEHLIENFKASERKLSDDRLRKYEDL HHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH YNKYIEGNELPW HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]