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The map label for this gene is yhbQ [C]

Identifier: 220931240

GI number: 220931240

Start: 404935

End: 405195

Strand: Direct

Name: yhbQ [C]

Synonym: Hore_03940

Alternate gene names: 220931240

Gene position: 404935-405195 (Clockwise)

Preceding gene: 220931239

Following gene: 220931241

Centisome position: 15.71

GC content: 37.93

Gene sequence:

>261_bases
ATGCACTATGTGTATATAGTTGAATGTAGTGACGGCAGTTTTTATACAGGGTATACCACTGATGTTGAAAGGCGGGTTAA
GGAGCATAATCGGGGAATAGGGGCTAAATATACCAGGGGTAGAAGGCCGGTTAAATTAAGATACCAGGAGTGTTATTCTA
CGAAAAGTGAGGCAATGAGAAGGGAGTATGAGTTAAAACAGCTAACCCGTTTCCGTAAAGAAGAACTAATTAATAAAAAA
GTTACAAGAACTGATAAATAA

Upstream 100 bases:

>100_bases
TACAATAAGGGAAGAACGGCGGAAGTTTTAACCCGGTTAATTAAAGAAGAAAAGACCCATCTGTTGGACCTGACAAAATA
TAAAGCTGATTTAAAATAAA

Downstream 100 bases:

>100_bases
AAAGTTAAAAAATGAACTTAAATATAAATTTAAAAAGCCCGGGCATGATTCAGATAAGGGCTGTTTTAAAAAGGGGGAAG
TTATGTTGAAGAAGAGGAAA

Product: Excinuclease ABC C subunit domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MHYVYIVECSDGSFYTGYTTDVERRVKEHNRGIGAKYTRGRRPVKLRYQECYSTKSEAMRREYELKQLTRFRKEELINKK
VTRTDK

Sequences:

>Translated_86_residues
MHYVYIVECSDGSFYTGYTTDVERRVKEHNRGIGAKYTRGRRPVKLRYQECYSTKSEAMRREYELKQLTRFRKEELINKK
VTRTDK
>Mature_86_residues
MHYVYIVECSDGSFYTGYTTDVERRVKEHNRGIGAKYTRGRRPVKLRYQECYSTKSEAMRREYELKQLTRFRKEELINKK
VTRTDK

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=75, Percent_Identity=42.6666666666667, Blast_Score=68, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10449; Mature: 10449

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYVYIVECSDGSFYTGYTTDVERRVKEHNRGIGAKYTRGRRPVKLRYQECYSTKSEAMR
CCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHCCCHHHHHH
REYELKQLTRFRKEELINKKVTRTDK
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHYVYIVECSDGSFYTGYTTDVERRVKEHNRGIGAKYTRGRRPVKLRYQECYSTKSEAMR
CCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHCCCHHHHHH
REYELKQLTRFRKEELINKKVTRTDK
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11016950 [H]