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The map label for this gene is hupE [H]

Identifier: 220931238

GI number: 220931238

Start: 403241

End: 404245

Strand: Direct

Name: hupE [H]

Synonym: Hore_03920

Alternate gene names: 220931238

Gene position: 403241-404245 (Clockwise)

Preceding gene: 220931237

Following gene: 220931239

Centisome position: 15.64

GC content: 35.42

Gene sequence:

>1005_bases
ATGAATACTATATCCCTGGCCCATGGTAATGGCGGTAAAATGATGGAAGATTTGATAGATAATCTTTTTTTGAAATATTT
AAATAATGATATTATTAATAAAAAGGATGATGCTTCTCCTGTACCTGAAATCAAAGGAGTACCAGTAATTTCAACAGATA
CCTTTGTAGTTGATCCCATTTTCTTTCCAGGTGGTAATATAGGAAAATTATCTATATGTGGTACAGTAAATGATCTGGCT
GTCACGGGTGCTATTCCCCTTTATTTGACAGTGGGGTTTATCCTGGAAGAGGGACTTCCCATAAAACACCTGGAAAAAAT
AATAATTTCTATGGCTGAAGTTAGCAGGGAAGCAAATGTTAAAATTGTGGCTGGCGATACTAAAGTAGTTGAACGGGGAA
AAGGTGATAAAATTTTTATTAATACAACCGGAGTCGGAATGATAGGCGATAAACTAAAGCTTTCTGATGAAAATATTAAA
TTAGGGGATAAAGTTATCATTAATGGTTCCATAGCTGAACATGGTCTGGCAATTTTAATGGAACGGAACCAGATGGACTT
CAGTACATCTATAAAAAGTGATTGTTGTACTCTGTCAGACCTCATTGTAACATTATTATCTGAAACTAATGGGATTAAAT
TTATGCGAGATCCTACCCGTGGAGGGATGGCTACAGTCCTGAATGAAATTGCAACCAGGTATAATGTTGGCATTGAAATT
GAGGAAGAAAAAGTTCCGTTGGGGGATGAAATAAAGAGTCTTTGTAAGATACTGGGTCTGGATCCATTATATCTGGCCAA
TGAAGGAAAGGTATTAATTATTGCTGACAGAGAAAAAAGTGAAAAGATTGTAGATATAATGAGAAGGCACCCTTATGGTC
GAAATTCATCTATAATCGGGACTATTGTAGATAATAATGATCAGCAAGTGTACCTCAAAACAAGAATCGGGGGAAAAAGA
ATAATTACAAAATTAATGCATGATATGCTACCTAGAATATGCTAG

Upstream 100 bases:

>100_bases
AAATGTACCCCGATGAAACCAGAAGGGCCGTGTATGGTTTCCCGGGAAGGGACCTGTGCTGCATATTATCGATATCGGGG
GAAGGTGAATTTATAAAAAA

Downstream 100 bases:

>100_bases
CTTATTATAGTTAGTATACCATGATTATAACTGGTTTTTCTGTATTCGAATAGAGTGCTAACTCCTTTGTCACTGTTCAT
TATAGTTGTAGAGAAAGGTT

Product: hydrogenase expression/formation protein HypE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNTISLAHGNGGKMMEDLIDNLFLKYLNNDIINKKDDASPVPEIKGVPVISTDTFVVDPIFFPGGNIGKLSICGTVNDLA
VTGAIPLYLTVGFILEEGLPIKHLEKIIISMAEVSREANVKIVAGDTKVVERGKGDKIFINTTGVGMIGDKLKLSDENIK
LGDKVIINGSIAEHGLAILMERNQMDFSTSIKSDCCTLSDLIVTLLSETNGIKFMRDPTRGGMATVLNEIATRYNVGIEI
EEEKVPLGDEIKSLCKILGLDPLYLANEGKVLIIADREKSEKIVDIMRRHPYGRNSSIIGTIVDNNDQQVYLKTRIGGKR
IITKLMHDMLPRIC

Sequences:

>Translated_334_residues
MNTISLAHGNGGKMMEDLIDNLFLKYLNNDIINKKDDASPVPEIKGVPVISTDTFVVDPIFFPGGNIGKLSICGTVNDLA
VTGAIPLYLTVGFILEEGLPIKHLEKIIISMAEVSREANVKIVAGDTKVVERGKGDKIFINTTGVGMIGDKLKLSDENIK
LGDKVIINGSIAEHGLAILMERNQMDFSTSIKSDCCTLSDLIVTLLSETNGIKFMRDPTRGGMATVLNEIATRYNVGIEI
EEEKVPLGDEIKSLCKILGLDPLYLANEGKVLIIADREKSEKIVDIMRRHPYGRNSSIIGTIVDNNDQQVYLKTRIGGKR
IITKLMHDMLPRIC
>Mature_334_residues
MNTISLAHGNGGKMMEDLIDNLFLKYLNNDIINKKDDASPVPEIKGVPVISTDTFVVDPIFFPGGNIGKLSICGTVNDLA
VTGAIPLYLTVGFILEEGLPIKHLEKIIISMAEVSREANVKIVAGDTKVVERGKGDKIFINTTGVGMIGDKLKLSDENIK
LGDKVIINGSIAEHGLAILMERNQMDFSTSIKSDCCTLSDLIVTLLSETNGIKFMRDPTRGGMATVLNEIATRYNVGIEI
EEEKVPLGDEIKSLCKILGLDPLYLANEGKVLIIADREKSEKIVDIMRRHPYGRNSSIIGTIVDNNDQQVYLKTRIGGKR
IITKLMHDMLPRIC

Specific function: May be involved in the maturation of the nifE hydrogenase [H]

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=339, Percent_Identity=42.7728613569322, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 36608; Mature: 36608

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTISLAHGNGGKMMEDLIDNLFLKYLNNDIINKKDDASPVPEIKGVPVISTDTFVVDPI
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEE
FFPGGNIGKLSICGTVNDLAVTGAIPLYLTVGFILEEGLPIKHLEKIIISMAEVSREANV
ECCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCE
KIVAGDTKVVERGKGDKIFINTTGVGMIGDKLKLSDENIKLGDKVIINGSIAEHGLAILM
EEEECCHHHHHCCCCCEEEEEECCCCEECCEEEECCCCEECCCEEEEECCHHHCCEEEEE
ERNQMDFSTSIKSDCCTLSDLIVTLLSETNGIKFMRDPTRGGMATVLNEIATRYNVGIEI
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE
EEEKVPLGDEIKSLCKILGLDPLYLANEGKVLIIADREKSEKIVDIMRRHPYGRNSSIIG
ECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEE
TIVDNNDQQVYLKTRIGGKRIITKLMHDMLPRIC
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTISLAHGNGGKMMEDLIDNLFLKYLNNDIINKKDDASPVPEIKGVPVISTDTFVVDPI
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEE
FFPGGNIGKLSICGTVNDLAVTGAIPLYLTVGFILEEGLPIKHLEKIIISMAEVSREANV
ECCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCE
KIVAGDTKVVERGKGDKIFINTTGVGMIGDKLKLSDENIKLGDKVIINGSIAEHGLAILM
EEEECCHHHHHCCCCCEEEEEECCCCEECCEEEECCCCEECCCEEEEECCHHHCCEEEEE
ERNQMDFSTSIKSDCCTLSDLIVTLLSETNGIKFMRDPTRGGMATVLNEIATRYNVGIEI
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE
EEEKVPLGDEIKSLCKILGLDPLYLANEGKVLIIADREKSEKIVDIMRRHPYGRNSSIIG
ECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEE
TIVDNNDQQVYLKTRIGGKRIITKLMHDMLPRIC
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1526470 [H]