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The map label for this gene is ycjP [C]

Identifier: 220931179

GI number: 220931179

Start: 341117

End: 341983

Strand: Direct

Name: ycjP [C]

Synonym: Hore_03310

Alternate gene names: 220931179

Gene position: 341117-341983 (Clockwise)

Preceding gene: 220931178

Following gene: 220931180

Centisome position: 13.23

GC content: 34.14

Gene sequence:

>867_bases
ATGAAAAAAAATAGAGAAAATTTATGGAAAAATACGGGTGCAAATCTGGCCCTTATTATAATATTTATCTTTGTTTTATT
TCCGATTTTTTGGGTATTTACTTTAGCATTTAAGTCCAGGCCTGACATACTGACCTGGCCTCCAAAGTTTATTTTCACAC
CTACTTTTGAGAATTTTAAAAATATACTTATAAGTGGAACTTCCGGGTCTTCAGCTGGTTCAACAACGGTTAATTTTATT
TTATATTTTAAAAATAGTTTGATAATAAGTGTTGGTTCAATAATTGTTTCATTACTTGTTGGTATTCCTGCATCTTATGC
TATTGCAAGATGGAATTTTAAGGGAAAAGAAGATATAGCATTTACTTTCCTAACATTCAGATTTGCACCACCATTAATGG
TTATAATTCCGATTTATGTTATATTTCGTAAATTGGGATTATTAAATACTTATATAGGAATGATCTGGGTCTACCAGTTG
ATAACCTTACCGATGATTATCTGGATTCTCCGGGGTTATTTTGAGGATATTTCCAATGAATTGGAAGAAGCATGCTTGGT
AGATGGTTATCACCAATGGCAGGCATTTTTCAAAATAATATTACCTCTTGTAAAACCTGGTATCGCAGCATCTTCATTAT
TGGCTTTTATTTATGCCTGGAACAACTTCATATTTGCTATGATACTGGGTGGTAGTGATGTTCAGCCGATTACAGTAGCT
TCTCTTCAATTTATGACGGCTGAAGCAATAAGGTATGGTGATATGGCAGCAGCCTGTGTAATTGCAGCAATTCCGGCCTT
AATCCTGGCAATATATTCACAGAAACACCTAATAAGGGGACTCAGTCTAGGTGCTGTTAAAGAATAA

Upstream 100 bases:

>100_bases
AACCTGGATAATTATCTATTTTATTAGTAAAAAAATGATAAATTATTGGTTAAAATGGAGGGCGCGTTTAAGTTAAACAT
TATCTGAGGAGGAAGTAATA

Downstream 100 bases:

>100_bases
ATTTATTCAGGGAGGAAAAACAAATGGGAAGTGTAATTTTTGAAAATGTTACCAAAATGTATGGAGAAAAAGTGGGTATA
AAAGATGTATCCCTTGAAAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKNRENLWKNTGANLALIIIFIFVLFPIFWVFTLAFKSRPDILTWPPKFIFTPTFENFKNILISGTSGSSAGSTTVNFI
LYFKNSLIISVGSIIVSLLVGIPASYAIARWNFKGKEDIAFTFLTFRFAPPLMVIIPIYVIFRKLGLLNTYIGMIWVYQL
ITLPMIIWILRGYFEDISNELEEACLVDGYHQWQAFFKIILPLVKPGIAASSLLAFIYAWNNFIFAMILGGSDVQPITVA
SLQFMTAEAIRYGDMAAACVIAAIPALILAIYSQKHLIRGLSLGAVKE

Sequences:

>Translated_288_residues
MKKNRENLWKNTGANLALIIIFIFVLFPIFWVFTLAFKSRPDILTWPPKFIFTPTFENFKNILISGTSGSSAGSTTVNFI
LYFKNSLIISVGSIIVSLLVGIPASYAIARWNFKGKEDIAFTFLTFRFAPPLMVIIPIYVIFRKLGLLNTYIGMIWVYQL
ITLPMIIWILRGYFEDISNELEEACLVDGYHQWQAFFKIILPLVKPGIAASSLLAFIYAWNNFIFAMILGGSDVQPITVA
SLQFMTAEAIRYGDMAAACVIAAIPALILAIYSQKHLIRGLSLGAVKE
>Mature_288_residues
MKKNRENLWKNTGANLALIIIFIFVLFPIFWVFTLAFKSRPDILTWPPKFIFTPTFENFKNILISGTSGSSAGSTTVNFI
LYFKNSLIISVGSIIVSLLVGIPASYAIARWNFKGKEDIAFTFLTFRFAPPLMVIIPIYVIFRKLGLLNTYIGMIWVYQL
ITLPMIIWILRGYFEDISNELEEACLVDGYHQWQAFFKIILPLVKPGIAASSLLAFIYAWNNFIFAMILGGSDVQPITVA
SLQFMTAEAIRYGDMAAACVIAAIPALILAIYSQKHLIRGLSLGAVKE

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=291, Percent_Identity=30.2405498281787, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=32.5581395348837, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789860, Length=293, Percent_Identity=25.2559726962457, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32346; Mature: 32346

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1 ; PS00310 LAMP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNRENLWKNTGANLALIIIFIFVLFPIFWVFTLAFKSRPDILTWPPKFIFTPTFENFK
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCHHHHH
NILISGTSGSSAGSTTVNFILYFKNSLIISVGSIIVSLLVGIPASYAIARWNFKGKEDIA
HEEEECCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHH
FTFLTFRFAPPLMVIIPIYVIFRKLGLLNTYIGMIWVYQLITLPMIIWILRGYFEDISNE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEACLVDGYHQWQAFFKIILPLVKPGIAASSLLAFIYAWNNFIFAMILGGSDVQPITVA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH
SLQFMTAEAIRYGDMAAACVIAAIPALILAIYSQKHLIRGLSLGAVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKNRENLWKNTGANLALIIIFIFVLFPIFWVFTLAFKSRPDILTWPPKFIFTPTFENFK
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCHHHHH
NILISGTSGSSAGSTTVNFILYFKNSLIISVGSIIVSLLVGIPASYAIARWNFKGKEDIA
HEEEECCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHH
FTFLTFRFAPPLMVIIPIYVIFRKLGLLNTYIGMIWVYQLITLPMIIWILRGYFEDISNE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEACLVDGYHQWQAFFKIILPLVKPGIAASSLLAFIYAWNNFIFAMILGGSDVQPITVA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH
SLQFMTAEAIRYGDMAAACVIAAIPALILAIYSQKHLIRGLSLGAVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]