| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is tkt [H]
Identifier: 220931177
GI number: 220931177
Start: 338023
End: 340008
Strand: Direct
Name: tkt [H]
Synonym: Hore_03290
Alternate gene names: 220931177
Gene position: 338023-340008 (Clockwise)
Preceding gene: 220931176
Following gene: 220931178
Centisome position: 13.11
GC content: 46.68
Gene sequence:
>1986_bases TTGTTAACACAGATTGCCGATACTGTCAGAGGATTATCAGCAGATGCAGTAGAAAAAGCAAACTCTGGTCATCCGGGTCT TCCCATCGGATGTGCTGATATAGGGGCTTTGCTCTATGGGAAGGTTATGAAATATGACCCGACTCAGCCGGAGTGGCCTG ACCGGGATCGGTTTATCCTTTCAGCAGGCCATGGCTCCATGCTTGTATATTCATTACTCCATTTAGCCGGTTTTGAAGTT AGTCTCGATGACCTTAAATCATTCCGTCAGTTAGGTTCCAAAACCCCGGGACATCCCGAATACGGAGAAACCCCCGGTGT TGAAACCACAACCGGCCCTCTGGGTCAGGGCTTTGCCAATGCTGTAGGAATGGCTATTGCCGAAAGAATGCTGGCCCAGC GCTTTAACACCGAAGGACATACCATAGTTGATCACTATACATATACCCTCCTCGGAGATGGCTGTATGATGGAAGGAATT TCATCTGAAGCTGCTTCCCTGGCCGGTCACCTTGGCCTGGGAAAACTGATTGCCATCTATGATGACAATGAAATCTCCAT CGGGGGTAGTACCGATATAACCTTTACCGAATCAGTAGCTGATAGATTTAAGGCCTATAACTGGCATGTCATTGAAGGGG TAGACGGCCATGACCTTAAGGCTCTGGAAGAGGCCGTTAAAGAAGCTAAGGAGGCAAATGATAAACCCAGTTTAATAATT GCTAAAACTAAAATTGCTTTCGGGGCTCCCACCAAAGAAGGGAGCAGTTCGGCCCACGGGGCTCCACTGGGTGAAGAAGA GATAAGGGGATTAAAGAAAAATATCGGTTTCCCTGAAGATAAGGAATTCTATATCCCGGATGAGGTAAAAGAATTCTTTA AGGACCATACCGAAAAGCTCAAAAAAGAACGTGAAGAATGGGAAAAAGCCTTTACTGAATGGGCTGAAGAAAACCCTGAC CTGAAAGAAGAATGGGATAAGGCCCATAATCTCGAGCTTCCCGGAGACTTAGAAGAAACAATCAATAATCTTGAGATAAA AACCCCCGTGGCTACCAGGAAGGCTTCAGGGGAGACTTTAAGAAAAATTGCCGATGAAATACCATACCTGGTCGGCGGTT CAGCAGACCTGGCCCCATCCAATAAGACCTATTTAGATAAATATGGAGAGATACAGAAAGACAGCTTTGATGGGCGTAAC TTCCGCTTCGGTGTCAGGGAGCATGCTATGGGAGCCATAGTAAACGGGTTATCCCTCCACAAAGGGGTAAGGCCCTTCTG TGCTACCTTTTTAGTCTTCTCAGATTACATGAGGCCTGCTATCAGAATGGCTGCCTTAATGAAACAGCCTGTAATCTATG TCTTTACCCATGACTCTGTATATGTAGGAGAAGATGGTCCTACCCACCAGCCTATCGAACATGTTGAAGCCCTGAGAGTG ATACCTAATCTCAAAGTTTTAAGACCGGCTGATGCCGAAGAGACCAAAGCAGCCTGGCTTGAGGCTGTAAAGAGGACCGA TGGACCTACAGCCCTGGTACTGACAAGACAGGGATTGCCCCATATTGAAAAAGAAGAGGGGATCGTAGGATTCAAACGTG GTGGTTATATTGTCCACAAGGAAAAAGGAGATAGAACCGATGCTGTCCTTATGGCCAGTGGTAGTGAGGTTTCCCTGGCT GTAGAGGTAGCTAAACTGCTTGAGGAAAAAGGTAAAGAGGTCAGGGTAGTATCTGTACCTGAGCGGCGGGAATTTGTAAA CCAGGGTACAGAATATATAGAAGAAGTCCTCGGTAAGGATACTTTCAGGGTAGTCCTGGAGGCTGGAGTCGGAAATGGCT GGTACCGTCTATTAGGTCATAAATGCCATGTGGTAAGCCTTGAGGATTTCGGTATGAGTGGTCCCGGGGAGGAAGTGGCC CGTGAGCTTGGATTTGATGCTGAAAAGATTGCTTCTGATATCCTGGGAAATTATGAAAGACTGTAA
Upstream 100 bases:
>100_bases TGTTATCGAAAAAATGTCCAAACATCCATTAACAAATATTGGTATTGAGCGCTTTCTTAATGACTGGAAGAAAGTACAGC AAGGATAGGAGGGTATTATC
Downstream 100 bases:
>100_bases TAGTGTTTAAATTATATTATTTGTGATTTAAGGGAGGTGGTAAATTACTTATATGGAGTTTTAGCAGGTTATATACTAAA ACTTCCGTAATATTTGACTA
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MLTQIADTVRGLSADAVEKANSGHPGLPIGCADIGALLYGKVMKYDPTQPEWPDRDRFILSAGHGSMLVYSLLHLAGFEV SLDDLKSFRQLGSKTPGHPEYGETPGVETTTGPLGQGFANAVGMAIAERMLAQRFNTEGHTIVDHYTYTLLGDGCMMEGI SSEAASLAGHLGLGKLIAIYDDNEISIGGSTDITFTESVADRFKAYNWHVIEGVDGHDLKALEEAVKEAKEANDKPSLII AKTKIAFGAPTKEGSSSAHGAPLGEEEIRGLKKNIGFPEDKEFYIPDEVKEFFKDHTEKLKKEREEWEKAFTEWAEENPD LKEEWDKAHNLELPGDLEETINNLEIKTPVATRKASGETLRKIADEIPYLVGGSADLAPSNKTYLDKYGEIQKDSFDGRN FRFGVREHAMGAIVNGLSLHKGVRPFCATFLVFSDYMRPAIRMAALMKQPVIYVFTHDSVYVGEDGPTHQPIEHVEALRV IPNLKVLRPADAEETKAAWLEAVKRTDGPTALVLTRQGLPHIEKEEGIVGFKRGGYIVHKEKGDRTDAVLMASGSEVSLA VEVAKLLEEKGKEVRVVSVPERREFVNQGTEYIEEVLGKDTFRVVLEAGVGNGWYRLLGHKCHVVSLEDFGMSGPGEEVA RELGFDAEKIASDILGNYERL
Sequences:
>Translated_661_residues MLTQIADTVRGLSADAVEKANSGHPGLPIGCADIGALLYGKVMKYDPTQPEWPDRDRFILSAGHGSMLVYSLLHLAGFEV SLDDLKSFRQLGSKTPGHPEYGETPGVETTTGPLGQGFANAVGMAIAERMLAQRFNTEGHTIVDHYTYTLLGDGCMMEGI SSEAASLAGHLGLGKLIAIYDDNEISIGGSTDITFTESVADRFKAYNWHVIEGVDGHDLKALEEAVKEAKEANDKPSLII AKTKIAFGAPTKEGSSSAHGAPLGEEEIRGLKKNIGFPEDKEFYIPDEVKEFFKDHTEKLKKEREEWEKAFTEWAEENPD LKEEWDKAHNLELPGDLEETINNLEIKTPVATRKASGETLRKIADEIPYLVGGSADLAPSNKTYLDKYGEIQKDSFDGRN FRFGVREHAMGAIVNGLSLHKGVRPFCATFLVFSDYMRPAIRMAALMKQPVIYVFTHDSVYVGEDGPTHQPIEHVEALRV IPNLKVLRPADAEETKAAWLEAVKRTDGPTALVLTRQGLPHIEKEEGIVGFKRGGYIVHKEKGDRTDAVLMASGSEVSLA VEVAKLLEEKGKEVRVVSVPERREFVNQGTEYIEEVLGKDTFRVVLEAGVGNGWYRLLGHKCHVVSLEDFGMSGPGEEVA RELGFDAEKIASDILGNYERL >Mature_661_residues MLTQIADTVRGLSADAVEKANSGHPGLPIGCADIGALLYGKVMKYDPTQPEWPDRDRFILSAGHGSMLVYSLLHLAGFEV SLDDLKSFRQLGSKTPGHPEYGETPGVETTTGPLGQGFANAVGMAIAERMLAQRFNTEGHTIVDHYTYTLLGDGCMMEGI SSEAASLAGHLGLGKLIAIYDDNEISIGGSTDITFTESVADRFKAYNWHVIEGVDGHDLKALEEAVKEAKEANDKPSLII AKTKIAFGAPTKEGSSSAHGAPLGEEEIRGLKKNIGFPEDKEFYIPDEVKEFFKDHTEKLKKEREEWEKAFTEWAEENPD LKEEWDKAHNLELPGDLEETINNLEIKTPVATRKASGETLRKIADEIPYLVGGSADLAPSNKTYLDKYGEIQKDSFDGRN FRFGVREHAMGAIVNGLSLHKGVRPFCATFLVFSDYMRPAIRMAALMKQPVIYVFTHDSVYVGEDGPTHQPIEHVEALRV IPNLKVLRPADAEETKAAWLEAVKRTDGPTALVLTRQGLPHIEKEEGIVGFKRGGYIVHKEKGDRTDAVLMASGSEVSLA VEVAKLLEEKGKEVRVVSVPERREFVNQGTEYIEEVLGKDTFRVVLEAGVGNGWYRLLGHKCHVVSLEDFGMSGPGEEVA RELGFDAEKIASDILGNYERL
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=582, Percent_Identity=28.1786941580756, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI4507521, Length=582, Percent_Identity=28.1786941580756, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI133778974, Length=590, Percent_Identity=27.1186440677966, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI225637459, Length=522, Percent_Identity=22.9885057471264, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI225637461, Length=490, Percent_Identity=22.8571428571429, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI225637463, Length=487, Percent_Identity=22.5872689938398, Blast_Score=103, Evalue=4e-22, Organism=Escherichia coli, GI1788808, Length=662, Percent_Identity=49.6978851963746, Blast_Score=626, Evalue=1e-180, Organism=Escherichia coli, GI48994911, Length=656, Percent_Identity=48.6280487804878, Blast_Score=620, Evalue=1e-178, Organism=Caenorhabditis elegans, GI17539652, Length=582, Percent_Identity=27.6632302405498, Blast_Score=166, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6325331, Length=667, Percent_Identity=44.9775112443778, Blast_Score=548, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6319593, Length=659, Percent_Identity=42.6403641881639, Blast_Score=509, Evalue=1e-145, Organism=Drosophila melanogaster, GI45551847, Length=589, Percent_Identity=27.1646859083192, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI45550715, Length=589, Percent_Identity=27.1646859083192, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24666278, Length=592, Percent_Identity=26.5202702702703, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24645119, Length=555, Percent_Identity=26.8468468468468, Blast_Score=156, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 72695; Mature: 72695
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00801 TRANSKETOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQIADTVRGLSADAVEKANSGHPGLPIGCADIGALLYGKVMKYDPTQPEWPDRDRFIL CCCHHHHHHHCCCHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE SAGHGSMLVYSLLHLAGFEVSLDDLKSFRQLGSKTPGHPEYGETPGVETTTGPLGQGFAN ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AVGMAIAERMLAQRFNTEGHTIVDHYTYTLLGDGCMMEGISSEAASLAGHLGLGKLIAIY HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCHHHHHHHHHCCCCCEEEEE DDNEISIGGSTDITFTESVADRFKAYNWHVIEGVDGHDLKALEEAVKEAKEANDKPSLII ECCEEEECCCCCCEEHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE AKTKIAFGAPTKEGSSSAHGAPLGEEEIRGLKKNIGFPEDKEFYIPDEVKEFFKDHTEKL EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHH KKEREEWEKAFTEWAEENPDLKEEWDKAHNLELPGDLEETINNLEIKTPVATRKASGETL HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHCCCEEECCCHHCCCCHHHH RKIADEIPYLVGGSADLAPSNKTYLDKYGEIQKDSFDGRNFRFGVREHAMGAIVNGLSLH HHHHHHCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH KGVRPFCATFLVFSDYMRPAIRMAALMKQPVIYVFTHDSVYVGEDGPTHQPIEHVEALRV HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCHHHHHHHHHH IPNLKVLRPADAEETKAAWLEAVKRTDGPTALVLTRQGLPHIEKEEGIVGFKRGGYIVHK CCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEC EKGDRTDAVLMASGSEVSLAVEVAKLLEEKGKEVRVVSVPERREFVNQGTEYIEEVLGKD CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC TFRVVLEAGVGNGWYRLLGHKCHVVSLEDFGMSGPGEEVARELGFDAEKIASDILGNYER CEEHHEECCCCCHHHHHHCCEEEEEEHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC L C >Mature Secondary Structure MLTQIADTVRGLSADAVEKANSGHPGLPIGCADIGALLYGKVMKYDPTQPEWPDRDRFIL CCCHHHHHHHCCCHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE SAGHGSMLVYSLLHLAGFEVSLDDLKSFRQLGSKTPGHPEYGETPGVETTTGPLGQGFAN ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AVGMAIAERMLAQRFNTEGHTIVDHYTYTLLGDGCMMEGISSEAASLAGHLGLGKLIAIY HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCHHHHHHHHHCCCCCEEEEE DDNEISIGGSTDITFTESVADRFKAYNWHVIEGVDGHDLKALEEAVKEAKEANDKPSLII ECCEEEECCCCCCEEHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE AKTKIAFGAPTKEGSSSAHGAPLGEEEIRGLKKNIGFPEDKEFYIPDEVKEFFKDHTEKL EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHH KKEREEWEKAFTEWAEENPDLKEEWDKAHNLELPGDLEETINNLEIKTPVATRKASGETL HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHCCCEEECCCHHCCCCHHHH RKIADEIPYLVGGSADLAPSNKTYLDKYGEIQKDSFDGRNFRFGVREHAMGAIVNGLSLH HHHHHHCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH KGVRPFCATFLVFSDYMRPAIRMAALMKQPVIYVFTHDSVYVGEDGPTHQPIEHVEALRV HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCHHHHHHHHHH IPNLKVLRPADAEETKAAWLEAVKRTDGPTALVLTRQGLPHIEKEEGIVGFKRGGYIVHK CCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEC EKGDRTDAVLMASGSEVSLAVEVAKLLEEKGKEVRVVSVPERREFVNQGTEYIEEVLGKD CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC TFRVVLEAGVGNGWYRLLGHKCHVVSLEDFGMSGPGEEVARELGFDAEKIASDILGNYER CEEHHEECCCCCHHHHHHCCEEEEEEHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]