Click here to switch to the map view.

The map label for this gene is yfdV [C]

Identifier: 220931142

GI number: 220931142

Start: 301513

End: 302433

Strand: Reverse

Name: yfdV [C]

Synonym: Hore_02940

Alternate gene names: 220931142

Gene position: 302433-301513 (Counterclockwise)

Preceding gene: 220931149

Following gene: 220931135

Centisome position: 11.73

GC content: 33.55

Gene sequence:

>921_bases
ATGGGTATTATAATAAATCAAATACTGGTCTTATTTTTAATTATTTTCCTGGGTTTTGTACTCAGAAAAAAGCAATTAAT
TAATGAAGAAATAAATAAAGGGCTTTCCAATATACTGGTAGATGTAACCTTGCCGGCCCTGATAATTTCATCTATGGCCA
TTGAATTTAATCCAGATATCATGGATAATATAAAGAAAATAGGTTTTATTTCAATAGCAAGTTATTTGACGGTAATTGCA
CTGGTCTTGATATTTACCAGTAAGTTATCCCTGCCTTCTAAAAGGAAGACCGTTTTCAAGTTTTTGCTTATTTTTGGAAA
CGTAGGGTATATGGGGTACCCTGTTATTGACACCATATACCCTGAACTGGGTATCCTCTATGCAGTTATAAATAACATTA
TCTTTAATGTACTTGTATGGACTTTCGGTATTTATCTCTTTATAAAAGATGAAAAAGGTAGCAATATTAAGCTACACAAC
CTTGTAAATAATGGACTGATAGCAGTTGTTATTGGATTTATTTTATTCCTTGGTAACATTAAACTTCCACTCCCGATAGA
AGGGGCCCTGGACAAAGTAGGTGAAATGACCTTTCCCCTGTCAATGATAATTATAGGAAGTTCCCTTACTAATGTCAGGT
TTAAAACCATTATAAAAGACTACTATCTATATCTGTTATGCCTGCTAAAATTGATAGCAATTCCACTGATCGGATTTTTA
ATTTTAATACAGTTTGATCTACCACAAATCATAAGGGATATCAGTGTGCTATTACTGGCTATGCCAGCAGCTGCCAGTGG
TGTTATTTTTGCAGAAAAATTTGAGGGGGATTATAAATTTGCCTCTGAAGGTGTCTTTATCACAACTTTATTTTCCCTGG
TAACTATACCCTTATTTATCTGGTTGACCCGTATCTATTAA

Upstream 100 bases:

>100_bases
ACTTGTATTTTAATTTTGACACCTATTTTTATTCATGTTAAAATAATTTAAGTTAATTAAGGGGACAGAAGTTAATTGGG
AGAAAGGAGTCAAAACCTTT

Downstream 100 bases:

>100_bases
GTAAAACCAGTTATAACTTAAAAGATGCCAGACACCTGTTTTCCGGGTCTGGTTCAGGGCGCCAGACCTCTAACCGGTCT
GCCTCGGAGGCATACTGTTT

Product: Auxin Efflux Carrier

Products: NA

Alternate protein names: Permease; AEC Family Permease; Transporter Auxin Efflux Carrier Family Protein; Auxin Efflux Carrier Family Protein; Auxin Efflux Carrier Family Permease; Transporter AEC Family; Malate Permease; Transporter Protein; Transporter Auxin Efflux Carrier Family; Permeases; L-Malate Uniport Protein; Malate Permease Related Permease

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MGIIINQILVLFLIIFLGFVLRKKQLINEEINKGLSNILVDVTLPALIISSMAIEFNPDIMDNIKKIGFISIASYLTVIA
LVLIFTSKLSLPSKRKTVFKFLLIFGNVGYMGYPVIDTIYPELGILYAVINNIIFNVLVWTFGIYLFIKDEKGSNIKLHN
LVNNGLIAVVIGFILFLGNIKLPLPIEGALDKVGEMTFPLSMIIIGSSLTNVRFKTIIKDYYLYLLCLLKLIAIPLIGFL
ILIQFDLPQIIRDISVLLLAMPAAASGVIFAEKFEGDYKFASEGVFITTLFSLVTIPLFIWLTRIY

Sequences:

>Translated_306_residues
MGIIINQILVLFLIIFLGFVLRKKQLINEEINKGLSNILVDVTLPALIISSMAIEFNPDIMDNIKKIGFISIASYLTVIA
LVLIFTSKLSLPSKRKTVFKFLLIFGNVGYMGYPVIDTIYPELGILYAVINNIIFNVLVWTFGIYLFIKDEKGSNIKLHN
LVNNGLIAVVIGFILFLGNIKLPLPIEGALDKVGEMTFPLSMIIIGSSLTNVRFKTIIKDYYLYLLCLLKLIAIPLIGFL
ILIQFDLPQIIRDISVLLLAMPAAASGVIFAEKFEGDYKFASEGVFITTLFSLVTIPLFIWLTRIY
>Mature_305_residues
GIIINQILVLFLIIFLGFVLRKKQLINEEINKGLSNILVDVTLPALIISSMAIEFNPDIMDNIKKIGFISIASYLTVIAL
VLIFTSKLSLPSKRKTVFKFLLIFGNVGYMGYPVIDTIYPELGILYAVINNIIFNVLVWTFGIYLFIKDEKGSNIKLHNL
VNNGLIAVVIGFILFLGNIKLPLPIEGALDKVGEMTFPLSMIIIGSSLTNVRFKTIIKDYYLYLLCLLKLIAIPLIGFLI
LIQFDLPQIIRDISVLLLAMPAAASGVIFAEKFEGDYKFASEGVFITTLFSLVTIPLFIWLTRIY

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34280; Mature: 34149

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIINQILVLFLIIFLGFVLRKKQLINEEINKGLSNILVDVTLPALIISSMAIEFNPDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH
MDNIKKIGFISIASYLTVIALVLIFTSKLSLPSKRKTVFKFLLIFGNVGYMGYPVIDTIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
PELGILYAVINNIIFNVLVWTFGIYLFIKDEKGSNIKLHNLVNNGLIAVVIGFILFLGNI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHCCHHHHHHHHHHHHCCC
KLPLPIEGALDKVGEMTFPLSMIIIGSSLTNVRFKTIIKDYYLYLLCLLKLIAIPLIGFL
CCCCCCCHHHHHHCCHHCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIQFDLPQIIRDISVLLLAMPAAASGVIFAEKFEGDYKFASEGVFITTLFSLVTIPLFI
HHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH
WLTRIY
HHHHCC
>Mature Secondary Structure 
GIIINQILVLFLIIFLGFVLRKKQLINEEINKGLSNILVDVTLPALIISSMAIEFNPDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH
MDNIKKIGFISIASYLTVIALVLIFTSKLSLPSKRKTVFKFLLIFGNVGYMGYPVIDTIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
PELGILYAVINNIIFNVLVWTFGIYLFIKDEKGSNIKLHNLVNNGLIAVVIGFILFLGNI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHCCHHHHHHHHHHHHCCC
KLPLPIEGALDKVGEMTFPLSMIIIGSSLTNVRFKTIIKDYYLYLLCLLKLIAIPLIGFL
CCCCCCCHHHHHHCCHHCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIQFDLPQIIRDISVLLLAMPAAASGVIFAEKFEGDYKFASEGVFITTLFSLVTIPLFI
HHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH
WLTRIY
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA