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The map label for this gene is 220931135

Identifier: 220931135

GI number: 220931135

Start: 291474

End: 292844

Strand: Reverse

Name: 220931135

Synonym: Hore_02870

Alternate gene names: NA

Gene position: 292844-291474 (Counterclockwise)

Preceding gene: 220931142

Following gene: 220931120

Centisome position: 11.36

GC content: 37.78

Gene sequence:

>1371_bases
ATGATAGAAAATTCAAATTATCAATCCTTAAGAAAAGATATTTTTAAACAACTCTGCAAAGATTTATATAATGACCAGAT
CAAAAAGACTATTAACAATCTTCCATATCAACTCACAAAAAAAGATAGTCATGAAGAACTCGACCTTATTAAAAATGAAA
TACTCCTGGCTATGGGTCTAAATCCTACTGCAAAAAATGACACAGAATTATCAGCTGAATTGAATACGGCCCTTAACTTA
AAAGAAGTTAAACAGCCGGTAGTTACAGTTAATCGAAAAATCTGTGACCTCTGCCAGAAAAAATATGGACCAGATTATTG
CAGAGTTGGGTGTGATATTAATGAAAAAGAAGGACTATTAATTGAAGACGGACGTTGTATTTCCTGTGGTAAATGCATTC
CAAAATGTCCCCTTGAAGCTGTTTCTGATAAGGTTGAATTTTTTCCCCTCTATAAATACCTTAAAAACGATACCCAGGTT
TATGCAAATGTGGCCCCGGCCATTATGGGACAGTTTGGTGAAAAGGTCACAGCCGGACACCTCCGGAGTGCTTTTAAAAA
AATTGGATTTACCGACATGGTAGAAGTGGCCCTCTTTGCTGATATAGTTACTTTAAGAGAAGCGGATGAATATAACCGCC
TTGTGCAGAAAGAGGGTGATTTTATGATTACAAGTTGTTGCTGCCCGGTATGGGTAAATATGGTAACAAAACATTACCCC
TCGTTAAATAACCATCTAACCAGGACCGTATCCCCAATGATAGCCTCCGGAAGATTGATAAAGCTACTTTTTCCTGATGC
CATAACTGTATTTATTGGCCCCTGCATTGCCAAAAAAGCAGAGGCGAAACATCCTGAATTAAAGGGTGCCATTGACTTTG
TCTTAACCTTTGATGAATTAGATCTCATTTTTGAAGCCCTTAATATTGACCCAGCAAGACTACCTGAAGATAATAAAGAA
CAGTCATCCAGAGGAGGTAGAGTCTATGCCCGGACTGGAGGAGTCAGCCAGGCAGTTTCTGATACAGTTAAGCGGCTTTC
TCCCCATGAGCATGTAAAATTTAAAGCAAATCAGGCCGATGGGGTAAAAAACTGCAAAAAGTTGCTTGATGAATTAAAAG
AAGGTAAAGTTGAGGCTACATTTATAGAGGGAATGGGCTGTGAGGGAGGATGTGTCGGTGGACCAAAAAGAATTAATGAT
ATTAAAGAAGCTACCAGGCTTGTAAACAAATTCGGCAGTAAAGCCCGGTCTCAAACCCCTATTGATAACAATAACATATA
TCACATTTTTAATTACCTAACACAGCTTATAGAATCCCAGGAACAAATAATTGATGAAGAAACATATGATAATATTCTGG
TAAGGAAATAA

Upstream 100 bases:

>100_bases
GCAACGACCCGGTTTTACTGCCCCTATAATTTTCAACTGAGACAGTCCTGAAACTTTGAGACTATCATTAAATTATGGTA
ACAGATATGAGAGGGATATT

Downstream 100 bases:

>100_bases
AAAACCTGGCTTCAGGGCCTATTTTTAAAAGGAGAATATCTTGAACCCCAAAAATCAGTTCTTTAATATAAAAAATAGAA
CGTAACTGATAAAATTTCAG

Product: ferredoxin hydrogenase

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MIENSNYQSLRKDIFKQLCKDLYNDQIKKTINNLPYQLTKKDSHEELDLIKNEILLAMGLNPTAKNDTELSAELNTALNL
KEVKQPVVTVNRKICDLCQKKYGPDYCRVGCDINEKEGLLIEDGRCISCGKCIPKCPLEAVSDKVEFFPLYKYLKNDTQV
YANVAPAIMGQFGEKVTAGHLRSAFKKIGFTDMVEVALFADIVTLREADEYNRLVQKEGDFMITSCCCPVWVNMVTKHYP
SLNNHLTRTVSPMIASGRLIKLLFPDAITVFIGPCIAKKAEAKHPELKGAIDFVLTFDELDLIFEALNIDPARLPEDNKE
QSSRGGRVYARTGGVSQAVSDTVKRLSPHEHVKFKANQADGVKNCKKLLDELKEGKVEATFIEGMGCEGGCVGGPKRIND
IKEATRLVNKFGSKARSQTPIDNNNIYHIFNYLTQLIESQEQIIDEETYDNILVRK

Sequences:

>Translated_456_residues
MIENSNYQSLRKDIFKQLCKDLYNDQIKKTINNLPYQLTKKDSHEELDLIKNEILLAMGLNPTAKNDTELSAELNTALNL
KEVKQPVVTVNRKICDLCQKKYGPDYCRVGCDINEKEGLLIEDGRCISCGKCIPKCPLEAVSDKVEFFPLYKYLKNDTQV
YANVAPAIMGQFGEKVTAGHLRSAFKKIGFTDMVEVALFADIVTLREADEYNRLVQKEGDFMITSCCCPVWVNMVTKHYP
SLNNHLTRTVSPMIASGRLIKLLFPDAITVFIGPCIAKKAEAKHPELKGAIDFVLTFDELDLIFEALNIDPARLPEDNKE
QSSRGGRVYARTGGVSQAVSDTVKRLSPHEHVKFKANQADGVKNCKKLLDELKEGKVEATFIEGMGCEGGCVGGPKRIND
IKEATRLVNKFGSKARSQTPIDNNNIYHIFNYLTQLIESQEQIIDEETYDNILVRK
>Mature_456_residues
MIENSNYQSLRKDIFKQLCKDLYNDQIKKTINNLPYQLTKKDSHEELDLIKNEILLAMGLNPTAKNDTELSAELNTALNL
KEVKQPVVTVNRKICDLCQKKYGPDYCRVGCDINEKEGLLIEDGRCISCGKCIPKCPLEAVSDKVEFFPLYKYLKNDTQV
YANVAPAIMGQFGEKVTAGHLRSAFKKIGFTDMVEVALFADIVTLREADEYNRLVQKEGDFMITSCCCPVWVNMVTKHYP
SLNNHLTRTVSPMIASGRLIKLLFPDAITVFIGPCIAKKAEAKHPELKGAIDFVLTFDELDLIFEALNIDPARLPEDNKE
QSSRGGRVYARTGGVSQAVSDTVKRLSPHEHVKFKANQADGVKNCKKLLDELKEGKVEATFIEGMGCEGGCVGGPKRIND
IKEATRLVNKFGSKARSQTPIDNNNIYHIFNYLTQLIESQEQIIDEETYDNILVRK

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 51256; Mature: 51256

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENSNYQSLRKDIFKQLCKDLYNDQIKKTINNLPYQLTKKDSHEELDLIKNEILLAMGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHEEEEECC
NPTAKNDTELSAELNTALNLKEVKQPVVTVNRKICDLCQKKYGPDYCRVGCDINEKEGLL
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEE
IEDGRCISCGKCIPKCPLEAVSDKVEFFPLYKYLKNDTQVYANVAPAIMGQFGEKVTAGH
EECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
LRSAFKKIGFTDMVEVALFADIVTLREADEYNRLVQKEGDFMITSCCCPVWVNMVTKHYP
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCC
SLNNHLTRTVSPMIASGRLIKLLFPDAITVFIGPCIAKKAEAKHPELKGAIDFVLTFDEL
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEEHHHH
DLIFEALNIDPARLPEDNKEQSSRGGRVYARTGGVSQAVSDTVKRLSPHEHVKFKANQAD
HHHHHHHCCCHHCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCC
GVKNCKKLLDELKEGKVEATFIEGMGCEGGCVGGPKRINDIKEATRLVNKFGSKARSQTP
CHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
IDNNNIYHIFNYLTQLIESQEQIIDEETYDNILVRK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MIENSNYQSLRKDIFKQLCKDLYNDQIKKTINNLPYQLTKKDSHEELDLIKNEILLAMGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHEEEEECC
NPTAKNDTELSAELNTALNLKEVKQPVVTVNRKICDLCQKKYGPDYCRVGCDINEKEGLL
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEE
IEDGRCISCGKCIPKCPLEAVSDKVEFFPLYKYLKNDTQVYANVAPAIMGQFGEKVTAGH
EECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
LRSAFKKIGFTDMVEVALFADIVTLREADEYNRLVQKEGDFMITSCCCPVWVNMVTKHYP
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCC
SLNNHLTRTVSPMIASGRLIKLLFPDAITVFIGPCIAKKAEAKHPELKGAIDFVLTFDEL
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEEHHHH
DLIFEALNIDPARLPEDNKEQSSRGGRVYARTGGVSQAVSDTVKRLSPHEHVKFKANQAD
HHHHHHHCCCHHCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCC
GVKNCKKLLDELKEGKVEATFIEGMGCEGGCVGGPKRINDIKEATRLVNKFGSKARSQTP
CHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
IDNNNIYHIFNYLTQLIESQEQIIDEETYDNILVRK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]