| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is hisD [H]
Identifier: 220931068
GI number: 220931068
Start: 227639
End: 228922
Strand: Direct
Name: hisD [H]
Synonym: Hore_02200
Alternate gene names: 220931068
Gene position: 227639-228922 (Clockwise)
Preceding gene: 220931067
Following gene: 220931069
Centisome position: 8.83
GC content: 44.78
Gene sequence:
>1284_bases GTGGAAATACTGAGATATCCAGAAAATAAGGACAGGATTAAAGAGATAGCAAAAAAGAGGGCTGATTTTATTGATGAAGA TAAATTAAAATCAGTCCAGGAGATTGTTAACAGGGTTAAGGTAAGAGGGGATGAAGCCCTGTTTGAATATACCCGCAAAT TTGACCGGGTTAACCTTAAAAAACTTAGGGTGAGTGAGAAAGAGATTGAAGAAGCCTATCAGAGTGTTGACAAGGGTTTT CTCCAAGATTTAAAACAGGCAATAAATAATATTGGTGATTATCACCGGAAACAGTTAAAGGAAAGCTGGTTCAGCCATGA TCGGAAGGGGAATATCATGGGTCAGTTAATAAATCCTGTACAGCGGGTTGGAGCCTATGTCCCCGGAGGGCGGGCCCCTT ATCCTTCTTCAGTAATAATGACCGTTATTCCGGCCAGGGTGGCCGGGGTAGATGAAGTGGTAGTGGTAACTCCACCTGAT AAAGAGGGTAAGGTCAACAGTTATACCCTTGTAGCTACAAGAGAGGCAGGGGCTGATGAAATATACAGGGTCGGGGGAGC CCAGGCGGTAGCTGCCCTGACCTATGGTACTGAATCTATTAAACCTGTAGAGAAAATTGTGGGACCGGGTAATATTTATG TGACTCTGGCTAAAAAGATGGTATCAGGTATTGTTGGTATCGATATGCTGGCTGGTCCCAGCGAAATTATGATTCTGGCT GACGAAACAGCTGAGCCGGAGTATATAGCCGCTGATCTCCTGTCACAGGCAGAACATGATCCTCTGGCAGCCCCGGTGTT TGTTACCCCGGACTGGAAATTGGTTGAAGAGGTTATTTCTCACCTGGAAAACCAGATGAAAGATCAGCCCCGCCGGGAGA CTATGGCAAAATCCTGGGAAAATCAGGGATTAATAATAATTGTTGAAGATATTAAAACTGGACTGGAAATGGTAAACCTG TTTGGCCCGGAACACTTTGAGCTGATGGTTGAAGACCCTTTTAAGTACTTACCGGATATTAAAAACGCCGGTGCCATATT CCTGGGGAAATATTCACCCGAACCCCTGGGGGACTATGTAGCCGGTCCGAATCATGTTTTGCCGACCGGAGGTACTGCCC GTTTTTCTTCACCATTAAGTGTTGATGATTTTATAAAAAAATCTAGCCTTATCTTTTATTCCAGAGAAGGTTTTAATGAA GTAGCAGGGGGGGCTATTTCCCTGGCCCAGAAAGAGGGATTTAACGGTCATGCCAGTTCGGTTTCCATCAGATTAGGACG GTGA
Upstream 100 bases:
>100_bases GTAACCTCATCAGCCCGTTTAGTAGTTAATAATGTGAGTTATAAAATTAAACATAAGCAAATAAGTGAGTTAATCAATAA AATCAATGAGGTGGTCAAGA
Downstream 100 bases:
>100_bases TTATCCTGATTTAACCTGAGTAAATTTTAGAACTATATTTCAGGGTTCTAATAATTTATGTTTCTGGTCGCAAAAATAGG TGACTTATCTAGGAAAATTA
Product: Histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MEILRYPENKDRIKEIAKKRADFIDEDKLKSVQEIVNRVKVRGDEALFEYTRKFDRVNLKKLRVSEKEIEEAYQSVDKGF LQDLKQAINNIGDYHRKQLKESWFSHDRKGNIMGQLINPVQRVGAYVPGGRAPYPSSVIMTVIPARVAGVDEVVVVTPPD KEGKVNSYTLVATREAGADEIYRVGGAQAVAALTYGTESIKPVEKIVGPGNIYVTLAKKMVSGIVGIDMLAGPSEIMILA DETAEPEYIAADLLSQAEHDPLAAPVFVTPDWKLVEEVISHLENQMKDQPRRETMAKSWENQGLIIIVEDIKTGLEMVNL FGPEHFELMVEDPFKYLPDIKNAGAIFLGKYSPEPLGDYVAGPNHVLPTGGTARFSSPLSVDDFIKKSSLIFYSREGFNE VAGGAISLAQKEGFNGHASSVSIRLGR
Sequences:
>Translated_427_residues MEILRYPENKDRIKEIAKKRADFIDEDKLKSVQEIVNRVKVRGDEALFEYTRKFDRVNLKKLRVSEKEIEEAYQSVDKGF LQDLKQAINNIGDYHRKQLKESWFSHDRKGNIMGQLINPVQRVGAYVPGGRAPYPSSVIMTVIPARVAGVDEVVVVTPPD KEGKVNSYTLVATREAGADEIYRVGGAQAVAALTYGTESIKPVEKIVGPGNIYVTLAKKMVSGIVGIDMLAGPSEIMILA DETAEPEYIAADLLSQAEHDPLAAPVFVTPDWKLVEEVISHLENQMKDQPRRETMAKSWENQGLIIIVEDIKTGLEMVNL FGPEHFELMVEDPFKYLPDIKNAGAIFLGKYSPEPLGDYVAGPNHVLPTGGTARFSSPLSVDDFIKKSSLIFYSREGFNE VAGGAISLAQKEGFNGHASSVSIRLGR >Mature_427_residues MEILRYPENKDRIKEIAKKRADFIDEDKLKSVQEIVNRVKVRGDEALFEYTRKFDRVNLKKLRVSEKEIEEAYQSVDKGF LQDLKQAINNIGDYHRKQLKESWFSHDRKGNIMGQLINPVQRVGAYVPGGRAPYPSSVIMTVIPARVAGVDEVVVVTPPD KEGKVNSYTLVATREAGADEIYRVGGAQAVAALTYGTESIKPVEKIVGPGNIYVTLAKKMVSGIVGIDMLAGPSEIMILA DETAEPEYIAADLLSQAEHDPLAAPVFVTPDWKLVEEVISHLENQMKDQPRRETMAKSWENQGLIIIVEDIKTGLEMVNL FGPEHFELMVEDPFKYLPDIKNAGAIFLGKYSPEPLGDYVAGPNHVLPTGGTARFSSPLSVDDFIKKSSLIFYSREGFNE VAGGAISLAQKEGFNGHASSVSIRLGR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=403, Percent_Identity=38.9578163771712, Blast_Score=297, Evalue=8e-82, Organism=Saccharomyces cerevisiae, GI6319819, Length=404, Percent_Identity=37.1287128712871, Blast_Score=264, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47307; Mature: 47307
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILRYPENKDRIKEIAKKRADFIDEDKLKSVQEIVNRVKVRGDEALFEYTRKFDRVNLK CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH KLRVSEKEIEEAYQSVDKGFLQDLKQAINNIGDYHRKQLKESWFSHDRKGNIMGQLINPV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH QRVGAYVPGGRAPYPSSVIMTVIPARVAGVDEVVVVTPPDKEGKVNSYTLVATREAGADE HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHH IYRVGGAQAVAALTYGTESIKPVEKIVGPGNIYVTLAKKMVSGIVGIDMLAGPSEIMILA HHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEE DETAEPEYIAADLLSQAEHDPLAAPVFVTPDWKLVEEVISHLENQMKDQPRRETMAKSWE CCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NQGLIIIVEDIKTGLEMVNLFGPEHFELMVEDPFKYLPDIKNAGAIFLGKYSPEPLGDYV CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCEEEEECCCCCCCHHHC AGPNHVLPTGGTARFSSPLSVDDFIKKSSLIFYSREGFNEVAGGAISLAQKEGFNGHASS CCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHCCCHHHHHHHCCCCCCCCE VSIRLGR EEEEECC >Mature Secondary Structure MEILRYPENKDRIKEIAKKRADFIDEDKLKSVQEIVNRVKVRGDEALFEYTRKFDRVNLK CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH KLRVSEKEIEEAYQSVDKGFLQDLKQAINNIGDYHRKQLKESWFSHDRKGNIMGQLINPV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH QRVGAYVPGGRAPYPSSVIMTVIPARVAGVDEVVVVTPPDKEGKVNSYTLVATREAGADE HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHH IYRVGGAQAVAALTYGTESIKPVEKIVGPGNIYVTLAKKMVSGIVGIDMLAGPSEIMILA HHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEE DETAEPEYIAADLLSQAEHDPLAAPVFVTPDWKLVEEVISHLENQMKDQPRRETMAKSWE CCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NQGLIIIVEDIKTGLEMVNLFGPEHFELMVEDPFKYLPDIKNAGAIFLGKYSPEPLGDYV CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCEEEEECCCCCCCHHHC AGPNHVLPTGGTARFSSPLSVDDFIKKSSLIFYSREGFNEVAGGAISLAQKEGFNGHASS CCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHCCCHHHHHHHCCCCCCCCE VSIRLGR EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA