| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is hisB [H]
Identifier: 220931069
GI number: 220931069
Start: 229060
End: 229653
Strand: Direct
Name: hisB [H]
Synonym: Hore_02210
Alternate gene names: 220931069
Gene position: 229060-229653 (Clockwise)
Preceding gene: 220931068
Following gene: 220931070
Centisome position: 8.88
GC content: 43.27
Gene sequence:
>594_bases GTGGTTGAAATAACGAGAAAAACAAAGGAGACAAAAATAAAACTAAATCTTGACCTGGATGGACAGGGAAGGGCAAAGAT TAATACAGGTATAGGTTTTTTTGATCATATGCTGGAATTGTGGGCAGTTCATGGTTTTTTTGACCTGGTGTTGTCTGTTG AGGGGGATCTGGAAGTTGATGGGCATCACACTGTGGAAGATACTGGGATTGTCCTTGGGGAAGGACTTAAAAAAGCCCTT GGTAATAAAGCTGGCCTTAAGAGGTATGGGAATGTTATTATCCCAATGGATGAGAGCCTGGTCCTGGTTTCCCTTGACTT AAGCGGTCGTCCCTATTATGAAGATGATCTTGTTTTTAACAGGACTCAGGTCGGGGGGTTTCCAGTTGAACTCCTGGAAG AATTTTTCCGGGCTCTGACCAATAATGCTGGAATTACTCTTCATATAAAAATGTTAAGGGGAAAGAATACTCACCACCTG ATTGAAGCCTGCTTTAAAGGTTTTGGTCGAGCCCTGGATGTAGCATTGACCGGAGAAGAAAGGTTAAATAATACTCCCCT GTCCTCCAAAGGTTCTCTGGGGGAGGGTGGTTAA
Upstream 100 bases:
>100_bases TTTCAGGGTTCTAATAATTTATGTTTCTGGTCGCAAAAATAGGTGACTTATCTAGGAAAATTATTTTAATGAAAACTTAA AGAAAGGCAGCTGGTTTACC
Downstream 100 bases:
>100_bases AAGTGATTGTTGTTATTGATTATGGTATTGGAAATCTGGGGAGTGTTGTTAAAGCCTTTAAATATTTAGGTGTTCCTGTG AAATTAACAGCCAGCCCTGA
Product: Imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MVEITRKTKETKIKLNLDLDGQGRAKINTGIGFFDHMLELWAVHGFFDLVLSVEGDLEVDGHHTVEDTGIVLGEGLKKAL GNKAGLKRYGNVIIPMDESLVLVSLDLSGRPYYEDDLVFNRTQVGGFPVELLEEFFRALTNNAGITLHIKMLRGKNTHHL IEACFKGFGRALDVALTGEERLNNTPLSSKGSLGEGG
Sequences:
>Translated_197_residues MVEITRKTKETKIKLNLDLDGQGRAKINTGIGFFDHMLELWAVHGFFDLVLSVEGDLEVDGHHTVEDTGIVLGEGLKKAL GNKAGLKRYGNVIIPMDESLVLVSLDLSGRPYYEDDLVFNRTQVGGFPVELLEEFFRALTNNAGITLHIKMLRGKNTHHL IEACFKGFGRALDVALTGEERLNNTPLSSKGSLGEGG >Mature_197_residues MVEITRKTKETKIKLNLDLDGQGRAKINTGIGFFDHMLELWAVHGFFDLVLSVEGDLEVDGHHTVEDTGIVLGEGLKKAL GNKAGLKRYGNVIIPMDESLVLVSLDLSGRPYYEDDLVFNRTQVGGFPVELLEEFFRALTNNAGITLHIKMLRGKNTHHL IEACFKGFGRALDVALTGEERLNNTPLSSKGSLGEGG
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=190, Percent_Identity=50.5263157894737, Blast_Score=183, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=214, Percent_Identity=37.3831775700935, Blast_Score=139, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21635; Mature: 21635
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEITRKTKETKIKLNLDLDGQGRAKINTGIGFFDHMLELWAVHGFFDLVLSVEGDLEVD CCEECCCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCEEEC GHHTVEDTGIVLGEGLKKALGNKAGLKRYGNVIIPMDESLVLVSLDLSGRPYYEDDLVFN CCCEECCCCEEEHHHHHHHHCCHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCCEEEE RTQVGGFPVELLEEFFRALTNNAGITLHIKMLRGKNTHHLIEACFKGFGRALDVALTGEE ECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHH RLNNTPLSSKGSLGEGG HCCCCCCCCCCCCCCCC >Mature Secondary Structure MVEITRKTKETKIKLNLDLDGQGRAKINTGIGFFDHMLELWAVHGFFDLVLSVEGDLEVD CCEECCCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCEEEC GHHTVEDTGIVLGEGLKKALGNKAGLKRYGNVIIPMDESLVLVSLDLSGRPYYEDDLVFN CCCEECCCCEEEHHHHHHHHCCHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCCEEEE RTQVGGFPVELLEEFFRALTNNAGITLHIKMLRGKNTHHLIEACFKGFGRALDVALTGEE ECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHH RLNNTPLSSKGSLGEGG HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA