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The map label for this gene is ydiB [H]

Identifier: 220931044

GI number: 220931044

Start: 201573

End: 202049

Strand: Direct

Name: ydiB [H]

Synonym: Hore_01950

Alternate gene names: 220931044

Gene position: 201573-202049 (Clockwise)

Preceding gene: 220931043

Following gene: 220931045

Centisome position: 7.82

GC content: 41.51

Gene sequence:

>477_bases
ATGAGCCAGGAAACATGGCAGGTTATAAGTGATTCGGTTGGGGAAACCCTGAAAATAGGAAAAATAACAGGAGAGCTGGT
GGAACCGGGTCAAATTATTTTGCTGGCAGGAGACCTGGGAGCCGGAAAAACTGTTTTTACCCGGGGACTGGCTGAGGGAC
TCGGTGTTGATGAAGATGTAACCAGTCCCACCTATAATCTTATTAATGAATACGATGGAGACCTTCCCCTTTTTCATATG
GATCTTTATCGTCTTGAGGAAGAAGAGGATATATATGATATTGGATTTGAAGAATACCTGGACAGGGAAGGGGTTGTTGT
GATCGAGTGGCCGGATATAGTATATGATGTTATTCCTCAGGATTTTATATATGTAAAGATAGAAAAAAGTAATCATGACA
CCAGGCGGAAATTAACTTTTGAAGCAGAGGGTGAAAAAAGTAAAAGGTTACTGGAAGGGTTGGCTCAGAAATGTTAG

Upstream 100 bases:

>100_bases
GTAACCGGGCTCTTTAGATGAAGCCCGGTTATTTTTATTTTACTTTTTAATACTTTGTGTTATAATGGTAATGCTAAAGA
CAGGGGTGAGGTGAAGAATA

Downstream 100 bases:

>100_bases
TTATGGGAATTGACACCAGTGGGGCGGTTGGTTCGGTTGGCCTTTACAATGATGATGGAGTCCTTGGTGAAATCAATATA
AAACTTAAAAGAAGGCACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSQETWQVISDSVGETLKIGKITGELVEPGQIILLAGDLGAGKTVFTRGLAEGLGVDEDVTSPTYNLINEYDGDLPLFHM
DLYRLEEEEDIYDIGFEEYLDREGVVVIEWPDIVYDVIPQDFIYVKIEKSNHDTRRKLTFEAEGEKSKRLLEGLAQKC

Sequences:

>Translated_158_residues
MSQETWQVISDSVGETLKIGKITGELVEPGQIILLAGDLGAGKTVFTRGLAEGLGVDEDVTSPTYNLINEYDGDLPLFHM
DLYRLEEEEDIYDIGFEEYLDREGVVVIEWPDIVYDVIPQDFIYVKIEKSNHDTRRKLTFEAEGEKSKRLLEGLAQKC
>Mature_157_residues
SQETWQVISDSVGETLKIGKITGELVEPGQIILLAGDLGAGKTVFTRGLAEGLGVDEDVTSPTYNLINEYDGDLPLFHMD
LYRLEEEEDIYDIGFEEYLDREGVVVIEWPDIVYDVIPQDFIYVKIEKSNHDTRRKLTFEAEGEKSKRLLEGLAQKC

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=134, Percent_Identity=32.8358208955224, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17889; Mature: 17758

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQETWQVISDSVGETLKIGKITGELVEPGQIILLAGDLGAGKTVFTRGLAEGLGVDEDV
CCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
TSPTYNLINEYDGDLPLFHMDLYRLEEEEDIYDIGFEEYLDREGVVVIEWPDIVYDVIPQ
CCCHHHHHHHCCCCCCEEEHHHHHCCCCCCEEECCHHHHHCCCCEEEEECCHHHHHHCCC
DFIYVKIEKSNHDTRRKLTFEAEGEKSKRLLEGLAQKC
CEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SQETWQVISDSVGETLKIGKITGELVEPGQIILLAGDLGAGKTVFTRGLAEGLGVDEDV
CCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
TSPTYNLINEYDGDLPLFHMDLYRLEEEEDIYDIGFEEYLDREGVVVIEWPDIVYDVIPQ
CCCHHHHHHHCCCCCCEEEHHHHHCCCCCCEEECCHHHHHCCCCEEEEECCHHHHHHCCC
DFIYVKIEKSNHDTRRKLTFEAEGEKSKRLLEGLAQKC
CEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]