Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220931008

Identifier: 220931008

GI number: 220931008

Start: 164939

End: 166507

Strand: Direct

Name: 220931008

Synonym: Hore_01590

Alternate gene names: NA

Gene position: 164939-166507 (Clockwise)

Preceding gene: 220931007

Following gene: 220931009

Centisome position: 6.4

GC content: 37.28

Gene sequence:

>1569_bases
ATGGCTTTAGTAACGGCATATTCTTTTGGTGAAATAATAAAAGAACTAGATAATATTATTTCATCAATAGAACCGAAAAA
ATTTAAGGAGACCCGGTGGTTCAGGAAAAAGGCCGATGACTTAATAGGTGTAGAGCTAGTAGACTATGGTGTATTAGAGT
ATAAACCTGATGAAAGACTGGTAATTCCAGCAGTTGTCTCCTTTCATATGCAGGATCGGGTCAACAATACAGGGTATGAA
GAACTATATTATTTACCACTGGTAATAAATAAAAATTATGATGAAAAATGCCTTTTGTTACTGGAGATAGAAAACACCTC
ATATACAGCTTATGTATATGAGGGGATATATTCGCTGGAATATAACAGGGTTCTCGATGAGTTTGTTAAAAGAGAAGGTA
GTCTTGAAATGGAAAAAGGAGGCTATCTTCAGGCTGAATTATTAAATTATTATAATAATGTTACCAGGTCTTATTCGTTG
ACAGAGGTTTCAAGTAATAGTCTGGCTTTAATCGAAAGAAGCAGTATTATAAAGACTTATCGAAAAATGGTACCCGGGGT
CAATCCTGATCTGGAAATAGGATTATCACTTATCAGAGAAACCGGTTTCAGAAATTTTCCCGAAATAAAAGGATATGTCT
CCTATCAAAAGAATAATATCAATTATGACATCTGTCTTATCGAACAATATGTAAATAACGAGGGGGATGTCTGGGCTTAT
ACCCAGCGTTTCCTCTCGCGTTATTTGCATTATGTAAGTGATAACCCGGGGAAGGACTCCCTGTTTACATACCTTGACCC
CTTTATTGAAGAGATGGAATACCTGGGTGAGGTCATTGGTGAACTACATCTATCCCTGTCTGGAATAGAGCAGGATAATT
TTAAACCACGGAAGCCAACCCTGGCAGAAATTGAAGCCTGGCATGAAGAAGTACAACAGAATACAGAGTTACTCTTTAAA
TTACTTAAGAAAAACAAGAATAATATCAATAATGATTATAACTATTACAGGGTGCTAAACATGGTCCTTGATAAGGAAAA
AACAATATTTGGAGCAGTAAAGCGCATTTTTGGATTAAAGGATTCACTGGGTAAATATATGAGGGTTCACGGGGACCTTC
ATTTAGAGCAAATATTAAAGACTGAAGATGATTTTATGGTCCTTGACTTTGAGGGCGAGCCTTTAAAGAGTATTCAGCAT
CGCCGCATGAAGTATTCTCCATTAAAAGATATAGCCGGAATGATGAGATCCTTTAACTATGCTGGTTATGCGGGCTACTT
TGATTTTGTTAAAAAGAATCAGGGTATAAATGACCGGGGAAGATTTATTAAAGCAATCTCACTATGGGAGGAAGAGGCCC
GGACATCTTTCTTGACAGGGTATCAGAATAAGATAAGAGAAAATAATGGAGACTTTTTACCACCTGAAGATAAATTTGAC
CAGGTGCTGGCCCTGTTTAAGATTGAAAAAGCTCTGTATGAAGGGATATATGAGATCAATAATAGACCAGACTGGTTGCA
CATTCCGCTCCAGGGGATACTGGACTGTGTGGAAGAAATCGCTGACTGA

Upstream 100 bases:

>100_bases
GAACTGGCTATCATATTAATCCTACCCCTCCAGAGATTGCAGCAGATTCTCTAAAAGAGATAGGGGGATAAACAATCTAT
TGTGGTGGAAGGTGTTAAAT

Downstream 100 bases:

>100_bases
GAGCTATAACAGGGGTAACAAAAATTATCAAATATTATAAGGAGGTATCATAATGGATAATTTGAAAGTAACCATGCTAA
CCAAGGAATACCCACCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Aminoglycoside Phosphotransferase; Pep2 Protein; 1 4-Alpha-Glucan Branching; Trehalose Synthase-Like; Alpha Amylase Domain-Containing Protein; Trehalose Synthase/ Maltokinase; Protein Probably Involved In Trehalose Biosynthesis; Alpha Amylase; Glycogen Branching; Glycosidase; Sugar Phosphotransferase; Trehalose Synthase/Maltokinase; Trehalose Synthase-Fused Maltokinase-Like Protein; Alpha Amylase Catalytic Region; Trehalose Synthase Protein; Trehalose Synthase-Like Protein; Trehalose Synthase-Fused Maltokinase; Alpha Amylase/Trehalose Synthase; Alpha Amylase Family Protein; Bifunctional Trehalose/Maltose Transglucosylase/Maltokinase; 4-Alpha-Glucanotransferase; Domain Involved In Trehalose Biosynthesis; Glycoside Hydrolase Family Protein; Trehalose Synthase-Fused Maltokinase; Trehalose Synthas; Alpha-Amylase Family Protein; Maltokinase; Alpha-Glucosidase; Trehalose Synthase Maltokinase Fusion Protein; Trehalose Synthase Maltose Alpha-D-Glucosyltransferase; Alpha-1 4-GlucanAlpha-1 4-Glucan 6-Glycosyltransferase; Trehalose Synthase/Glycosidase Fusion Protein; Alpha Amylase Catalytic Domain Subfamily; Phosphotransferase; Phosphotransferase Family Protein; Trehalose Synthase/ Maltokinase-Like; Alpha Amylase Catalytic Subdomain

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MALVTAYSFGEIIKELDNIISSIEPKKFKETRWFRKKADDLIGVELVDYGVLEYKPDERLVIPAVVSFHMQDRVNNTGYE
ELYYLPLVINKNYDEKCLLLLEIENTSYTAYVYEGIYSLEYNRVLDEFVKREGSLEMEKGGYLQAELLNYYNNVTRSYSL
TEVSSNSLALIERSSIIKTYRKMVPGVNPDLEIGLSLIRETGFRNFPEIKGYVSYQKNNINYDICLIEQYVNNEGDVWAY
TQRFLSRYLHYVSDNPGKDSLFTYLDPFIEEMEYLGEVIGELHLSLSGIEQDNFKPRKPTLAEIEAWHEEVQQNTELLFK
LLKKNKNNINNDYNYYRVLNMVLDKEKTIFGAVKRIFGLKDSLGKYMRVHGDLHLEQILKTEDDFMVLDFEGEPLKSIQH
RRMKYSPLKDIAGMMRSFNYAGYAGYFDFVKKNQGINDRGRFIKAISLWEEEARTSFLTGYQNKIRENNGDFLPPEDKFD
QVLALFKIEKALYEGIYEINNRPDWLHIPLQGILDCVEEIAD

Sequences:

>Translated_522_residues
MALVTAYSFGEIIKELDNIISSIEPKKFKETRWFRKKADDLIGVELVDYGVLEYKPDERLVIPAVVSFHMQDRVNNTGYE
ELYYLPLVINKNYDEKCLLLLEIENTSYTAYVYEGIYSLEYNRVLDEFVKREGSLEMEKGGYLQAELLNYYNNVTRSYSL
TEVSSNSLALIERSSIIKTYRKMVPGVNPDLEIGLSLIRETGFRNFPEIKGYVSYQKNNINYDICLIEQYVNNEGDVWAY
TQRFLSRYLHYVSDNPGKDSLFTYLDPFIEEMEYLGEVIGELHLSLSGIEQDNFKPRKPTLAEIEAWHEEVQQNTELLFK
LLKKNKNNINNDYNYYRVLNMVLDKEKTIFGAVKRIFGLKDSLGKYMRVHGDLHLEQILKTEDDFMVLDFEGEPLKSIQH
RRMKYSPLKDIAGMMRSFNYAGYAGYFDFVKKNQGINDRGRFIKAISLWEEEARTSFLTGYQNKIRENNGDFLPPEDKFD
QVLALFKIEKALYEGIYEINNRPDWLHIPLQGILDCVEEIAD
>Mature_521_residues
ALVTAYSFGEIIKELDNIISSIEPKKFKETRWFRKKADDLIGVELVDYGVLEYKPDERLVIPAVVSFHMQDRVNNTGYEE
LYYLPLVINKNYDEKCLLLLEIENTSYTAYVYEGIYSLEYNRVLDEFVKREGSLEMEKGGYLQAELLNYYNNVTRSYSLT
EVSSNSLALIERSSIIKTYRKMVPGVNPDLEIGLSLIRETGFRNFPEIKGYVSYQKNNINYDICLIEQYVNNEGDVWAYT
QRFLSRYLHYVSDNPGKDSLFTYLDPFIEEMEYLGEVIGELHLSLSGIEQDNFKPRKPTLAEIEAWHEEVQQNTELLFKL
LKKNKNNINNDYNYYRVLNMVLDKEKTIFGAVKRIFGLKDSLGKYMRVHGDLHLEQILKTEDDFMVLDFEGEPLKSIQHR
RMKYSPLKDIAGMMRSFNYAGYAGYFDFVKKNQGINDRGRFIKAISLWEEEARTSFLTGYQNKIRENNGDFLPPEDKFDQ
VLALFKIEKALYEGIYEINNRPDWLHIPLQGILDCVEEIAD

Specific function: Unknown

COG id: COG3281

COG function: function code G; Uncharacterized protein, probably involved in trehalose biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61118; Mature: 60987

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVTAYSFGEIIKELDNIISSIEPKKFKETRWFRKKADDLIGVELVDYGVLEYKPDERL
CCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCE
VIPAVVSFHMQDRVNNTGYEELYYLPLVINKNYDEKCLLLLEIENTSYTAYVYEGIYSLE
EHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEHHHHHHH
YNRVLDEFVKREGSLEMEKGGYLQAELLNYYNNVTRSYSLTEVSSNSLALIERSSIIKTY
HHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHHHHH
RKMVPGVNPDLEIGLSLIRETGFRNFPEIKGYVSYQKNNINYDICLIEQYVNNEGDVWAY
HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCHHH
TQRFLSRYLHYVSDNPGKDSLFTYLDPFIEEMEYLGEVIGELHLSLSGIEQDNFKPRKPT
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LAEIEAWHEEVQQNTELLFKLLKKNKNNINNDYNYYRVLNMVLDKEKTIFGAVKRIFGLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DSLGKYMRVHGDLHLEQILKTEDDFMVLDFEGEPLKSIQHRRMKYSPLKDIAGMMRSFNY
HHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCC
AGYAGYFDFVKKNQGINDRGRFIKAISLWEEEARTSFLTGYQNKIRENNGDFLPPEDKFD
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
QVLALFKIEKALYEGIYEINNRPDWLHIPLQGILDCVEEIAD
HHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCC
>Mature Secondary Structure 
ALVTAYSFGEIIKELDNIISSIEPKKFKETRWFRKKADDLIGVELVDYGVLEYKPDERL
CEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCE
VIPAVVSFHMQDRVNNTGYEELYYLPLVINKNYDEKCLLLLEIENTSYTAYVYEGIYSLE
EHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEHHHHHHH
YNRVLDEFVKREGSLEMEKGGYLQAELLNYYNNVTRSYSLTEVSSNSLALIERSSIIKTY
HHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHHHHH
RKMVPGVNPDLEIGLSLIRETGFRNFPEIKGYVSYQKNNINYDICLIEQYVNNEGDVWAY
HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCHHH
TQRFLSRYLHYVSDNPGKDSLFTYLDPFIEEMEYLGEVIGELHLSLSGIEQDNFKPRKPT
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LAEIEAWHEEVQQNTELLFKLLKKNKNNINNDYNYYRVLNMVLDKEKTIFGAVKRIFGLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DSLGKYMRVHGDLHLEQILKTEDDFMVLDFEGEPLKSIQHRRMKYSPLKDIAGMMRSFNY
HHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCC
AGYAGYFDFVKKNQGINDRGRFIKAISLWEEEARTSFLTGYQNKIRENNGDFLPPEDKFD
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
QVLALFKIEKALYEGIYEINNRPDWLHIPLQGILDCVEEIAD
HHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA