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The map label for this gene is rfaG [C]

Identifier: 220931009

GI number: 220931009

Start: 166560

End: 167774

Strand: Direct

Name: rfaG [C]

Synonym: Hore_01600

Alternate gene names: 220931009

Gene position: 166560-167774 (Clockwise)

Preceding gene: 220931008

Following gene: 220931011

Centisome position: 6.46

GC content: 39.84

Gene sequence:

>1215_bases
ATGGATAATTTGAAAGTAACCATGCTAACCAAGGAATACCCACCATATATATATGGTGGGGCCGGGGTCCATGTTGATTA
TTTAACAGGGGCTTTAAAAGATATAATGAATGTTGAAGTCAGGTGTTTTGGTGATCAGGAGGGTAATAAAAAGGGGATAG
ATGTAACCGGTTATCACCCCTGGGAAGATTTAAGTGAGGGAAGTGACATTCGCTTCCGTAAGGTACTGGATCCTTTTTCA
GTTGATCTGGCTATGGTAAAGGACCCAATAGATTCTCATCTGGTTCATGCCCATACCTGGTATACTTTTATGGCAGGTTT
TCTGGCTAAAAAATTGTATAATATACCCCTGGTAACTACAATACATAGTCTGGAACCTTTAAGGCCGTGGAAGGAAGAAC
AGCTGGGTCGCGGGTACCAGCTCAGTCTCTGGATGGAAAAAATGGGAATAGAGAATTCTGATAAAGTGATTGCTGTTTCC
GGTGAAATGAAAAAGGATATCTTAAAATATTATGATGTTGATGAAGACAGGGTAGAGGTAATATACAATGGTATCGATCT
AGACCAGTACAGGTATACTGATAGTGATACATATAGAAGGAAATATGGTATCGATCTTGATAAACCATATGTCTTATTTG
TGGGTAGAATAACCAGACAGAAAGGGATTATTCACCTGGTAAATGCCATTAAATATATAAATGAGAACACCCAGGTAGTT
TTATGTGCCGGTGCTCCTGATACTGAAGAGATAGAAAAAGAAATGACAGAAAAAGTTGCCGCCATACAGGAAAAGAGGGA
TGGAGTAATCTGGATAAATGAGATGGTCAGTAAAGAAGCTGTTATCGAATTTTATTCCAATGCTGCTGTCTTTTGCTGTC
CTTCTGTTTACGAACCCTTTGGTATTATTAACCTGGAAGCCATGGCCTGCCAGACACCGGTTGTTGCTTCGGCGGTCGGT
GGGATAAAAGAAGTAGTTGTTGATGGAGAAACAGGTTTTCTTGTAAATTACGAACAGAAGGATGAAAAAACCGGTGAGCC
CAAAAACCCTGAGGCCTTCTCTAAATCCCTGGCAGAGAAAATAAATATGGTTTTAGAAGATGACAAACTTGCCAAAGAGA
TGGGTAAAAAAGGACGAGAACGGGTAGAAAAATATTTTAGCTGGGAGAGTATTGCCCGGCAGACAAAGAAACTTTATGAA
AGTATTGTTCAGTAA

Upstream 100 bases:

>100_bases
ATTCCGCTCCAGGGGATACTGGACTGTGTGGAAGAAATCGCTGACTGAGAGCTATAACAGGGGTAACAAAAATTATCAAA
TATTATAAGGAGGTATCATA

Downstream 100 bases:

>100_bases
GAAGGTAAGAATATTGGCTGGGTTATCCCAAAAAATACCGGCTTTTTAGCCGGTATTTTTTAGTCATGTTCAGGAAGGTA
ATTATCGACCAGATAATAAA

Product: glycogen synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDNLKVTMLTKEYPPYIYGGAGVHVDYLTGALKDIMNVEVRCFGDQEGNKKGIDVTGYHPWEDLSEGSDIRFRKVLDPFS
VDLAMVKDPIDSHLVHAHTWYTFMAGFLAKKLYNIPLVTTIHSLEPLRPWKEEQLGRGYQLSLWMEKMGIENSDKVIAVS
GEMKKDILKYYDVDEDRVEVIYNGIDLDQYRYTDSDTYRRKYGIDLDKPYVLFVGRITRQKGIIHLVNAIKYINENTQVV
LCAGAPDTEEIEKEMTEKVAAIQEKRDGVIWINEMVSKEAVIEFYSNAAVFCCPSVYEPFGIINLEAMACQTPVVASAVG
GIKEVVVDGETGFLVNYEQKDEKTGEPKNPEAFSKSLAEKINMVLEDDKLAKEMGKKGRERVEKYFSWESIARQTKKLYE
SIVQ

Sequences:

>Translated_404_residues
MDNLKVTMLTKEYPPYIYGGAGVHVDYLTGALKDIMNVEVRCFGDQEGNKKGIDVTGYHPWEDLSEGSDIRFRKVLDPFS
VDLAMVKDPIDSHLVHAHTWYTFMAGFLAKKLYNIPLVTTIHSLEPLRPWKEEQLGRGYQLSLWMEKMGIENSDKVIAVS
GEMKKDILKYYDVDEDRVEVIYNGIDLDQYRYTDSDTYRRKYGIDLDKPYVLFVGRITRQKGIIHLVNAIKYINENTQVV
LCAGAPDTEEIEKEMTEKVAAIQEKRDGVIWINEMVSKEAVIEFYSNAAVFCCPSVYEPFGIINLEAMACQTPVVASAVG
GIKEVVVDGETGFLVNYEQKDEKTGEPKNPEAFSKSLAEKINMVLEDDKLAKEMGKKGRERVEKYFSWESIARQTKKLYE
SIVQ
>Mature_404_residues
MDNLKVTMLTKEYPPYIYGGAGVHVDYLTGALKDIMNVEVRCFGDQEGNKKGIDVTGYHPWEDLSEGSDIRFRKVLDPFS
VDLAMVKDPIDSHLVHAHTWYTFMAGFLAKKLYNIPLVTTIHSLEPLRPWKEEQLGRGYQLSLWMEKMGIENSDKVIAVS
GEMKKDILKYYDVDEDRVEVIYNGIDLDQYRYTDSDTYRRKYGIDLDKPYVLFVGRITRQKGIIHLVNAIKYINENTQVV
LCAGAPDTEEIEKEMTEKVAAIQEKRDGVIWINEMVSKEAVIEFYSNAAVFCCPSVYEPFGIINLEAMACQTPVVASAVG
GIKEVVVDGETGFLVNYEQKDEKTGEPKNPEAFSKSLAEKINMVLEDDKLAKEMGKKGRERVEKYFSWESIARQTKKLYE
SIVQ

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32564184, Length=317, Percent_Identity=23.6593059936909, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46074; Mature: 46074

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLKVTMLTKEYPPYIYGGAGVHVDYLTGALKDIMNVEVRCFGDQEGNKKGIDVTGYHP
CCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCC
WEDLSEGSDIRFRKVLDPFSVDLAMVKDPIDSHLVHAHTWYTFMAGFLAKKLYNIPLVTT
HHHHCCCCCEEHHHHCCCHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IHSLEPLRPWKEEQLGRGYQLSLWMEKMGIENSDKVIAVSGEMKKDILKYYDVDEDRVEV
ECCCCCCCCCCHHHHCCCEEEEEEHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEE
IYNGIDLDQYRYTDSDTYRRKYGIDLDKPYVLFVGRITRQKGIIHLVNAIKYINENTQVV
EEECCCCCCEECCCCHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCCEEE
LCAGAPDTEEIEKEMTEKVAAIQEKRDGVIWINEMVSKEAVIEFYSNAAVFCCPSVYEPF
EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCC
GIINLEAMACQTPVVASAVGGIKEVVVDGETGFLVNYEQKDEKTGEPKNPEAFSKSLAEK
CEEEEHHHHCCCCHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
INMVLEDDKLAKEMGKKGRERVEKYFSWESIARQTKKLYESIVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLKVTMLTKEYPPYIYGGAGVHVDYLTGALKDIMNVEVRCFGDQEGNKKGIDVTGYHP
CCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCC
WEDLSEGSDIRFRKVLDPFSVDLAMVKDPIDSHLVHAHTWYTFMAGFLAKKLYNIPLVTT
HHHHCCCCCEEHHHHCCCHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IHSLEPLRPWKEEQLGRGYQLSLWMEKMGIENSDKVIAVSGEMKKDILKYYDVDEDRVEV
ECCCCCCCCCCHHHHCCCEEEEEEHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEE
IYNGIDLDQYRYTDSDTYRRKYGIDLDKPYVLFVGRITRQKGIIHLVNAIKYINENTQVV
EEECCCCCCEECCCCHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCCEEE
LCAGAPDTEEIEKEMTEKVAAIQEKRDGVIWINEMVSKEAVIEFYSNAAVFCCPSVYEPF
EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCC
GIINLEAMACQTPVVASAVGGIKEVVVDGETGFLVNYEQKDEKTGEPKNPEAFSKSLAEK
CEEEEHHHHCCCCHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
INMVLEDDKLAKEMGKKGRERVEKYFSWESIARQTKKLYESIVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]