| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is spoIIE [H]
Identifier: 220930903
GI number: 220930903
Start: 61533
End: 63905
Strand: Direct
Name: spoIIE [H]
Synonym: Hore_00550
Alternate gene names: 220930903
Gene position: 61533-63905 (Clockwise)
Preceding gene: 220930902
Following gene: 220930904
Centisome position: 2.39
GC content: 37.17
Gene sequence:
>2373_bases GTGTTTGGACAAGTTGAATCAGTAAAAAATTATAGTTTTTTGAAAGATAATATTAAAACCAAAAGTAAATTATCATATTT TTTTTATTACCTGATAATCGGGGTTTTAGGTTTTATCCTCGGCAGGGCAGAGGTGTTTAGTGGATATTACCCTTTTTCCC TGATATACTGGATGGGTTTTGCCCTGGAAAGCCCACTGGTAATGATTTACATCACTGTAGTAAGTGGAGCAGGGCTGGCC TGGAATGGAGATTATTTGAATCTTATTTATCTGCTGGCTGGATTTTCAGGGGTTATCCTCAGTAGTTTTTTTAAAAAAGG GAAAGATTCTATTTTCTTTCCGGTAGCTACGGGATTATGCTATCTTGCCCTGTCCATTGTCAGAGGGATAATTTATCAAA AACCCCTTTACTGGTTTGTAATAACAGGTATTGAAGCCCTTGGTATTATACTAGTTTTTTTATTATTAAAGGGTACCAGA ATACATATTTTTGATAAGCAGGGGTTTGTAAAGGCTTCACCAGTGGTGTTATTGATAACCAGTCTGGGATTTCTGGTGGG GATTGCCAATATTGATTTTGTTCCCTTTTTTGTCTTACATACATTTATCTATTTGTTTGTCAGTGGTGTTGCCTATATTT CCGGGTTTAGTTATGCAGTTACTGTTTCGGTGTTGTATGGTTTAATATTGAGTGGGCTGGGTCTGATACCATTTGTAGTT ATGTTGAGAATTTTAATTATCGGCGTTATAACAGGGCTTTTTAAAAGAAAACCTAAATATATGTTTATAGTAGGTTATTT TTTAACCTTTTTAGTATATTCTGGTTTTTCACCAGGATTATATGATTTAAAAGAGGCTGGTTATGGGTTTGGGATTGCGC TGGCCCTTTATCTGGTGATATCTGAATCCCTGTGGGTACAACTACTGTCGGGTTTAAAACCCAGTCCTTCCCGGGTTAAA AAGTTGAAAACAGATAATGAGTTAAATAAAATTTTTAAACAACACCTGCTGGAATTGAGCCGGGTTTTTAAAGAATTAAG TGTTACGTTTAAAGAGGTTTTACCTGATGAGGAAGAAGAAGAGAACCTGGAAGACCTGGCGTTTATTTTAAAAAATAAAG TCTGTCAGAGATGCCCCCGACTTAAAATATGCTGGAAAAAGGAACGGGCAGACACCTATATGAAACTCAGCAGGTTAGTT GAAAAGGCCAGGAAAGCCGGTAAAATAGAAAAACCAATGTTTAATAACCTATTTAAAGATAAATGTCCTTTTATCAACAA AATTATCGGTGGGGTTAAAAGTAGTTATGAAATATACCAGGTAAATAAATTCTGGCGGGAAAGACTGGATGATAAACAGC GTATTGTTTCTGAACAACTGGCGGGACTGAGCGAAATAATTCAGCAATTTTCCCAGTCTTCAGGTATTGTACTAAGGGAT AACCCGACACTTTCCCACATATATGAAAGGGCTGTTAACCGGGGAATTGATGTTTATAATCTGGAGGTTGATACTAATAT TTATTCATCCCGTCTTAATATTGTAGCAGAAATGGAACCCTGTAGTGATACCAGACCCTGTGAAGAACAGCTTTTACCCC TTATTAGCTCTGAATACCAATATAATTTCAGGGTAATAAATAAAAAGTGTGGTAATAAACTTAAAGATATTCCCTGTAAA TTATTATACGCCCCCCGGGGTAGCTATAGCCTTGAATATGCTGTTTTACAGAAGGCAAGTACCGGGAAAATATCAGGGGA TACATATCTTTTTAGACCTTTGAGGGATGGTAAGGATTTAATTGTCTTAAGTGATGGGATGGGAGTTGGGAAAAAGGCCT ATCAGGAAAGTAAAGCTGCTGTGAATCTCCTTGAAAAGATTATTGAAGCCGGTTTTGACCGGGATCTGGCGATACGGACA ATTAACTCAGCCCTGTATTTCAGAAGCCAGGAAGAAAGTTTTACAACTCTGGATATCGGCTTTTTTGATACTTTTACCGG GGAACTTATCTTCAATAAAATCGGGGCAGTATCAAGCTTTGTGAAACGGGGTTTTGAGGTTTTGCAGATAAAGGCTTCTT CCTTACCGGTTGGAATTTTAGAGAAGGTTGAAATTTCTACTCATTCTGTAAACCTAAAGGAAAATGATTTTGTTATTATG GTGACCGATGGGGTCCTGGATTCGAGTCCTGACATTCAGGACAAAGAAGGTTGGTTTATGAGAATACTTCAGAATTGTTC TTTTGATAACCCCAGAGAACTGGCATCATATCTTATGGAGGTTGTTACCGGGGCCCAGGGCGGAGTTGATGATGATTTAA CTATTATTGTATTTAAGGTCAACAAATTTTTAGAAAAAAAGCAGGAAATTTAA
Upstream 100 bases:
>100_bases GTAAAATTTTGAAGGCATCTCTCTGTTTCTCGACAGTTAAATTAACTAATTTATTTTATAATATTAGTATGCGCTGGAAA AAACAGGAGGGATGCCTGAA
Downstream 100 bases:
>100_bases ACTAATATGTAGAATAGGTTGAATAAGTTGCTATTAAAACCGGGCTTTAAAGCCTAAAGGGGTTTGTACTCTTGGAGTTG CTGAAGAAATTTAGAGAATA
Product: Serine/threonine specific protein phosphatase spoIIE
Products: NA
Alternate protein names: Stage II sporulation protein H [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MFGQVESVKNYSFLKDNIKTKSKLSYFFYYLIIGVLGFILGRAEVFSGYYPFSLIYWMGFALESPLVMIYITVVSGAGLA WNGDYLNLIYLLAGFSGVILSSFFKKGKDSIFFPVATGLCYLALSIVRGIIYQKPLYWFVITGIEALGIILVFLLLKGTR IHIFDKQGFVKASPVVLLITSLGFLVGIANIDFVPFFVLHTFIYLFVSGVAYISGFSYAVTVSVLYGLILSGLGLIPFVV MLRILIIGVITGLFKRKPKYMFIVGYFLTFLVYSGFSPGLYDLKEAGYGFGIALALYLVISESLWVQLLSGLKPSPSRVK KLKTDNELNKIFKQHLLELSRVFKELSVTFKEVLPDEEEEENLEDLAFILKNKVCQRCPRLKICWKKERADTYMKLSRLV EKARKAGKIEKPMFNNLFKDKCPFINKIIGGVKSSYEIYQVNKFWRERLDDKQRIVSEQLAGLSEIIQQFSQSSGIVLRD NPTLSHIYERAVNRGIDVYNLEVDTNIYSSRLNIVAEMEPCSDTRPCEEQLLPLISSEYQYNFRVINKKCGNKLKDIPCK LLYAPRGSYSLEYAVLQKASTGKISGDTYLFRPLRDGKDLIVLSDGMGVGKKAYQESKAAVNLLEKIIEAGFDRDLAIRT INSALYFRSQEESFTTLDIGFFDTFTGELIFNKIGAVSSFVKRGFEVLQIKASSLPVGILEKVEISTHSVNLKENDFVIM VTDGVLDSSPDIQDKEGWFMRILQNCSFDNPRELASYLMEVVTGAQGGVDDDLTIIVFKVNKFLEKKQEI
Sequences:
>Translated_790_residues MFGQVESVKNYSFLKDNIKTKSKLSYFFYYLIIGVLGFILGRAEVFSGYYPFSLIYWMGFALESPLVMIYITVVSGAGLA WNGDYLNLIYLLAGFSGVILSSFFKKGKDSIFFPVATGLCYLALSIVRGIIYQKPLYWFVITGIEALGIILVFLLLKGTR IHIFDKQGFVKASPVVLLITSLGFLVGIANIDFVPFFVLHTFIYLFVSGVAYISGFSYAVTVSVLYGLILSGLGLIPFVV MLRILIIGVITGLFKRKPKYMFIVGYFLTFLVYSGFSPGLYDLKEAGYGFGIALALYLVISESLWVQLLSGLKPSPSRVK KLKTDNELNKIFKQHLLELSRVFKELSVTFKEVLPDEEEEENLEDLAFILKNKVCQRCPRLKICWKKERADTYMKLSRLV EKARKAGKIEKPMFNNLFKDKCPFINKIIGGVKSSYEIYQVNKFWRERLDDKQRIVSEQLAGLSEIIQQFSQSSGIVLRD NPTLSHIYERAVNRGIDVYNLEVDTNIYSSRLNIVAEMEPCSDTRPCEEQLLPLISSEYQYNFRVINKKCGNKLKDIPCK LLYAPRGSYSLEYAVLQKASTGKISGDTYLFRPLRDGKDLIVLSDGMGVGKKAYQESKAAVNLLEKIIEAGFDRDLAIRT INSALYFRSQEESFTTLDIGFFDTFTGELIFNKIGAVSSFVKRGFEVLQIKASSLPVGILEKVEISTHSVNLKENDFVIM VTDGVLDSSPDIQDKEGWFMRILQNCSFDNPRELASYLMEVVTGAQGGVDDDLTIIVFKVNKFLEKKQEI >Mature_790_residues MFGQVESVKNYSFLKDNIKTKSKLSYFFYYLIIGVLGFILGRAEVFSGYYPFSLIYWMGFALESPLVMIYITVVSGAGLA WNGDYLNLIYLLAGFSGVILSSFFKKGKDSIFFPVATGLCYLALSIVRGIIYQKPLYWFVITGIEALGIILVFLLLKGTR IHIFDKQGFVKASPVVLLITSLGFLVGIANIDFVPFFVLHTFIYLFVSGVAYISGFSYAVTVSVLYGLILSGLGLIPFVV MLRILIIGVITGLFKRKPKYMFIVGYFLTFLVYSGFSPGLYDLKEAGYGFGIALALYLVISESLWVQLLSGLKPSPSRVK KLKTDNELNKIFKQHLLELSRVFKELSVTFKEVLPDEEEEENLEDLAFILKNKVCQRCPRLKICWKKERADTYMKLSRLV EKARKAGKIEKPMFNNLFKDKCPFINKIIGGVKSSYEIYQVNKFWRERLDDKQRIVSEQLAGLSEIIQQFSQSSGIVLRD NPTLSHIYERAVNRGIDVYNLEVDTNIYSSRLNIVAEMEPCSDTRPCEEQLLPLISSEYQYNFRVINKKCGNKLKDIPCK LLYAPRGSYSLEYAVLQKASTGKISGDTYLFRPLRDGKDLIVLSDGMGVGKKAYQESKAAVNLLEKIIEAGFDRDLAIRT INSALYFRSQEESFTTLDIGFFDTFTGELIFNKIGAVSSFVKRGFEVLQIKASSLPVGILEKVEISTHSVNLKENDFVIM VTDGVLDSSPDIQDKEGWFMRILQNCSFDNPRELASYLMEVVTGAQGGVDDDLTIIVFKVNKFLEKKQEI
Specific function: Normally needed for pro-sigma E processing during sporulation but can be bypassed in vegetative cells. Activates spoIIAA by dephosphorylation [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein. Note=Polar septum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001932 - InterPro: IPR014221 - InterPro: IPR010822 [H]
Pfam domain/function: PF07228 SpoIIE [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 89338; Mature: 89338
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGQVESVKNYSFLKDNIKTKSKLSYFFYYLIIGVLGFILGRAEVFSGYYPFSLIYWMGF CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ALESPLVMIYITVVSGAGLAWNGDYLNLIYLLAGFSGVILSSFFKKGKDSIFFPVATGLC HHCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH YLALSIVRGIIYQKPLYWFVITGIEALGIILVFLLLKGTRIHIFDKQGFVKASPVVLLIT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH SLGFLVGIANIDFVPFFVLHTFIYLFVSGVAYISGFSYAVTVSVLYGLILSGLGLIPFVV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH MLRILIIGVITGLFKRKPKYMFIVGYFLTFLVYSGFSPGLYDLKEAGYGFGIALALYLVI HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHH SESLWVQLLSGLKPSPSRVKKLKTDNELNKIFKQHLLELSRVFKELSVTFKEVLPDEEEE HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ENLEDLAFILKNKVCQRCPRLKICWKKERADTYMKLSRLVEKARKAGKIEKPMFNNLFKD CCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KCPFINKIIGGVKSSYEIYQVNKFWRERLDDKQRIVSEQLAGLSEIIQQFSQSSGIVLRD CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC NPTLSHIYERAVNRGIDVYNLEVDTNIYSSRLNIVAEMEPCSDTRPCEEQLLPLISSEYQ CCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCC YNFRVINKKCGNKLKDIPCKLLYAPRGSYSLEYAVLQKASTGKISGDTYLFRPLRDGKDL EEEEEECHHHCCHHHCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCE IVLSDGMGVGKKAYQESKAAVNLLEKIIEAGFDRDLAIRTINSALYFRSQEESFTTLDIG EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC FFDTFTGELIFNKIGAVSSFVKRGFEVLQIKASSLPVGILEKVEISTHSVNLKENDFVIM HHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHEEECEEEECCCCCCEEEE VTDGVLDSSPDIQDKEGWFMRILQNCSFDNPRELASYLMEVVTGAQGGVDDDLTIIVFKV EECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHH NKFLEKKQEI HHHHHHHHCC >Mature Secondary Structure MFGQVESVKNYSFLKDNIKTKSKLSYFFYYLIIGVLGFILGRAEVFSGYYPFSLIYWMGF CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ALESPLVMIYITVVSGAGLAWNGDYLNLIYLLAGFSGVILSSFFKKGKDSIFFPVATGLC HHCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH YLALSIVRGIIYQKPLYWFVITGIEALGIILVFLLLKGTRIHIFDKQGFVKASPVVLLIT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH SLGFLVGIANIDFVPFFVLHTFIYLFVSGVAYISGFSYAVTVSVLYGLILSGLGLIPFVV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH MLRILIIGVITGLFKRKPKYMFIVGYFLTFLVYSGFSPGLYDLKEAGYGFGIALALYLVI HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHH SESLWVQLLSGLKPSPSRVKKLKTDNELNKIFKQHLLELSRVFKELSVTFKEVLPDEEEE HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ENLEDLAFILKNKVCQRCPRLKICWKKERADTYMKLSRLVEKARKAGKIEKPMFNNLFKD CCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KCPFINKIIGGVKSSYEIYQVNKFWRERLDDKQRIVSEQLAGLSEIIQQFSQSSGIVLRD CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC NPTLSHIYERAVNRGIDVYNLEVDTNIYSSRLNIVAEMEPCSDTRPCEEQLLPLISSEYQ CCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCC YNFRVINKKCGNKLKDIPCKLLYAPRGSYSLEYAVLQKASTGKISGDTYLFRPLRDGKDL EEEEEECHHHCCHHHCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCE IVLSDGMGVGKKAYQESKAAVNLLEKIIEAGFDRDLAIRTINSALYFRSQEESFTTLDIG EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC FFDTFTGELIFNKIGAVSSFVKRGFEVLQIKASSLPVGILEKVEISTHSVNLKENDFVIM HHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHEEECEEEECCCCCCEEEE VTDGVLDSSPDIQDKEGWFMRILQNCSFDNPRELASYLMEVVTGAQGGVDDDLTIIVFKV EECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHH NKFLEKKQEI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8830262; 9384377; 2832371; 8113187; 7570023 [H]