| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yvdM [H]
Identifier: 220930891
GI number: 220930891
Start: 50126
End: 50776
Strand: Direct
Name: yvdM [H]
Synonym: Hore_00430
Alternate gene names: 220930891
Gene position: 50126-50776 (Clockwise)
Preceding gene: 220930890
Following gene: 220930892
Centisome position: 1.94
GC content: 41.78
Gene sequence:
>651_bases ATGATAATTCACAGGGAGATTAAAGGATTTATATTTGACCTGGATGGAGTAATTACTGATACAGCCGAATTACATTATCG TAGCTGGAAAAAACTCGCTGATGAAGAAGGTATTCCATTTACCAGAGAGGATAATGAACAGCTGAGGGGGGTCTCCCGGA GGAAGTCTCTGGAGTTACTCCTTAATGGAAGGGAAGTTCCTGAAGAAAAGAAGCTGGAAATGATGGACAGGAAGAACAAC TATTATAAAGAATTTATTAAACAAATCACAGAAGAGGATCTTTTACCTGGGGCAAAAGAACTCCTGGATGAGCTTAAGAG TAGAGGATATAAACTTGCTGTTGCGTCAGCCAGTAAAAATGCTAAACCGGTAATTAAAAACCTTGGAGTAGAGCATGTCT TTGATCAAATTTCTGATGGTTATAGTGTGGAAAAAACCAAACCTGCTCCGGACCTCTTCCTTTACACAGCTAAACAGCTC GGGTTAAAACCTGAAGAATGTGTAGTTATTGAGGATGCCGAAGCGGGAATTGAGGCTGCCCTTGCTGCCGGAATGACTGC TGTTGGTATCGGTCCAGAAGAAAGGGTTGGCAAGGCCCACTTCCGTTATGATAAAGTTGCTGATATTAACCTTGATGATA TCCTTGCCTGA
Upstream 100 bases:
>100_bases CCTTTAACATTAAATTATTTAATATTTGTTCCCGGGGGATATTGTTGATATAATAATTAAGGGATTTTACTGGATAAAAT AAACAACAAGGAATGGGGTG
Downstream 100 bases:
>100_bases TTAAGCGGCAGGCCTCCCTTGCTTGCGGGGCGCTTCAGGAAATAAATACTGGTAGATGAACTCCCCTGGAAATTATGGAT TGCAGGGGAGTAATTTTTTT
Product: beta-phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MIIHREIKGFIFDLDGVITDTAELHYRSWKKLADEEGIPFTREDNEQLRGVSRRKSLELLLNGREVPEEKKLEMMDRKNN YYKEFIKQITEEDLLPGAKELLDELKSRGYKLAVASASKNAKPVIKNLGVEHVFDQISDGYSVEKTKPAPDLFLYTAKQL GLKPEECVVIEDAEAGIEAALAAGMTAVGIGPEERVGKAHFRYDKVADINLDDILA
Sequences:
>Translated_216_residues MIIHREIKGFIFDLDGVITDTAELHYRSWKKLADEEGIPFTREDNEQLRGVSRRKSLELLLNGREVPEEKKLEMMDRKNN YYKEFIKQITEEDLLPGAKELLDELKSRGYKLAVASASKNAKPVIKNLGVEHVFDQISDGYSVEKTKPAPDLFLYTAKQL GLKPEECVVIEDAEAGIEAALAAGMTAVGIGPEERVGKAHFRYDKVADINLDDILA >Mature_216_residues MIIHREIKGFIFDLDGVITDTAELHYRSWKKLADEEGIPFTREDNEQLRGVSRRKSLELLLNGREVPEEKKLEMMDRKNN YYKEFIKQITEEDLLPGAKELLDELKSRGYKLAVASASKNAKPVIKNLGVEHVFDQISDGYSVEKTKPAPDLFLYTAKQL GLKPEECVVIEDAEAGIEAALAAGMTAVGIGPEERVGKAHFRYDKVADINLDDILA
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=193, Percent_Identity=28.4974093264249, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI207113149, Length=216, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1787576, Length=190, Percent_Identity=38.9473684210526, Blast_Score=147, Evalue=4e-37, Organism=Escherichia coli, GI1789046, Length=186, Percent_Identity=31.1827956989247, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI87082080, Length=192, Percent_Identity=31.7708333333333, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788021, Length=218, Percent_Identity=25.6880733944954, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI116008157, Length=202, Percent_Identity=26.7326732673267, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI17137324, Length=202, Percent_Identity=27.2277227722772, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI45550911, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 24320; Mature: 24320
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIHREIKGFIFDLDGVITDTAELHYRSWKKLADEEGIPFTREDNEQLRGVSRRKSLELL CCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LNGREVPEEKKLEMMDRKNNYYKEFIKQITEEDLLPGAKELLDELKSRGYKLAVASASKN CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCC AKPVIKNLGVEHVFDQISDGYSVEKTKPAPDLFLYTAKQLGLKPEECVVIEDAEAGIEAA CCHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHEEEHHHHCCCCCCEEEEECCHHHHHHH LAAGMTAVGIGPEERVGKAHFRYDKVADINLDDILA HHHCCHHCCCCCHHHHCHHHHCCCCCCCCCHHHHCC >Mature Secondary Structure MIIHREIKGFIFDLDGVITDTAELHYRSWKKLADEEGIPFTREDNEQLRGVSRRKSLELL CCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LNGREVPEEKKLEMMDRKNNYYKEFIKQITEEDLLPGAKELLDELKSRGYKLAVASASKN CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCC AKPVIKNLGVEHVFDQISDGYSVEKTKPAPDLFLYTAKQLGLKPEECVVIEDAEAGIEAA CCHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHEEEHHHHCCCCCCEEEEECCHHHHHHH LAAGMTAVGIGPEERVGKAHFRYDKVADINLDDILA HHHCCHHCCCCCHHHHCHHHHCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]