| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is kojP [H]
Identifier: 220930890
GI number: 220930890
Start: 47678
End: 50020
Strand: Direct
Name: kojP [H]
Synonym: Hore_00420
Alternate gene names: 220930890
Gene position: 47678-50020 (Clockwise)
Preceding gene: 220930889
Following gene: 220930891
Centisome position: 1.85
GC content: 39.61
Gene sequence:
>2343_bases ATGGCGATAGCTTATAATCTAGGTAAAGGAGAATATAAAAACTGGATAATTTCTGAAACAGAATTTAATGAAAACAATCT GCCTAAATTTGAAACTATCTTTAGTCTTGGAAATGGTTATATGGGTTTAAGGGCGGCCACAGAAGAACACTATTTTAATG AAACAAGAGGTTGTTATGTGGCCGGAATGTTTGACAGGTTTAAAGGGGAGGTTGCCGAGCTTCCCAATATTCCTGATTAT GTAGGGATGGAGATTAAGCTTGACGGAGAGAGATTTAACCTGAACCAGGGAAAAATTATATCTTATCACAGGTACTTAAA CGTTAAAGACGGAGAACTGGTTAGAGAGGTGGAATGGCAAAGTCCAGCCGGAAATATTACAAAACTGGTCTTCAAACGCT TTGTTTCTCTTGCCAATCTCCATCTGGCCGGTTTTAAGATTAAAATAATTCCAGTTAACTATTCCGGAAAGGTGGCCATT AAAACTGGTTATAACGGGCAGGTAACCAATAGTGGTGTTCAACATTTCGTTGAAGGTGATAAAAGGGTTTTACCTGATGG TAAATCTTATTTAACTGTCCGGACCCAGGAGTCGGGTATTTTTACAATTGTAGCCGGTAAGTTCCGTTTCCTGATAAATG CCAGTGAAATTAATCCACAACAGCAGATCGTTACCGGTAGGCGTCAGCTTTTCCTGAGAAGCGAATATGAATTGAAAGAA AATGAGTGCCTGGAAATGGAGAAGTGTGTAATTGTATATACCGGGCGGGATCTGGAATTTAAAGATAAGGATATTGATTC TGGAGATATTGTTGAAACAGCTCTTACAACTCTAGATAAAGCAGGTACTAAGAGGTATGAAGAACTTTTTTCAGAACATC GCCAGAAATGGCACAAGCTATGGCATGAGATAGATATTGAAATCGGTGGGCCTGATTTTGATCAGCTTGCCGTAAGGTTT GCCCAGTATCATCTGGTACAGATGACCCCGTCCCATGACAGTCGTATCAGTGTTGCTGCCAAGGGGCTTTCGGGGGAAGG GTATAAGGGTCATGTTTTCTGGGATACCGAGATTTTTATCCTTCCTTTCTTTATCTATACTTTCCCACAAATAGCCCGGA AGTTACTCGAATATCGCTATCATACCCTGGATGGAGCTCGTAAAAAGGCCCGGGAAAATGGGTATAAAGGAGCCATGTAT CCCTGGGAAAGTGCTGATACCGGTGAGGAAACCACCCCTGAATTTGGTGAAGTTGATATAAAGACCGGGAAACCCATCAG GATCTGGTGTGGGGAAATAGAACAACATATTACGGCAGATGTTGCATATGCAATCTGGCATTATTATCAGGTTACCGGAG ACAAAGAATTTATGTATAACTATGGAACTGAAATTTTTATGGAGACAGCCCGCTTCTGGGCCAGTAGACTGGAGTATAAT CAGGGTCTGGACCGTTATGAAATTAAAGATGTCATCGGTCCTGATGAATATAGTGAACATGTTAACAATAATGCCTATAC AAATTATATGGTGAAATGGCACCTTGAGAAGGCAATTGATATCTACAACTGGTTATCAGATGATAGCAGAGATATTCTGG AGAAAATAATAAATAAAATTGCTTTAAAAGAAGATGAACTAAATGAATGGAAGAAAAAGAAAGATAAAATTTACCTTCCC TTCCAGGAAGACAGTAAAGTTATTCCTCAATTTGATGGTTTTATGGACCAGGATGTCATAGATATAAGCAGCTACCGTGG TGATGTCGGGGCTATAATGAAGGCTTATAGCTGGGATGAAATAACCAGCAGTCAGGTTATAAAACAGGCCGATGTAGTGA TGTTACTCTATCTTCTTGGGGAAGATTTTAGCCATGAGGTTAAAGAGAAAAATTATCATTATTATGAACCTAAGACCCTT CACGATTCTTCGTTAAGTCCCAGTATTCATGCCATTATGGGTAAGGAAATCGGTGATTTAGATGAGGCCTATAGATACTT CAATAAATCTACCACTATTGACCTTGGCAGGAATATGAGAAGCTGTGATGCTGGTTTGCATTCAGCTTCTCTTGGAGGTA TCTGGCAGGCAGTTGTTTTAGGCTTTGGTGGTGTTAAAGTTAAAGATAATGTTCTCAATATAGACCCCATGTTACCTGAG AAGTGGGATTACCTGAACTTTAAGCTAAAATGGCAGGGGATGCCAATCAGGGTTGAAATTCGTAATGACAGAGTAAGTGT CAGTTTTTTAAATGATGATAAAGCTATGCTAAAAGATGTTTCAGTAATGGTCAAGGGCCGTAACCTTCAGCTAAACAATA ATAAAGCAGTAGTGAATCTCTAA
Upstream 100 bases:
>100_bases TCTGATTGACTATGTTTAGAAACCTGGATCAAATTTTCAGGAATAATAATTCTGGAAACCTGGTCGGGTTAGATATAAAT ACTTTAAAGGAGGGCTGGGA
Downstream 100 bases:
>100_bases AACCCCCTTTAACATTAAATTATTTAATATTTGTTCCCGGGGGATATTGTTGATATAATAATTAAGGGATTTTACTGGAT AAAATAAACAACAAGGAATG
Product: Kojibiose phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MAIAYNLGKGEYKNWIISETEFNENNLPKFETIFSLGNGYMGLRAATEEHYFNETRGCYVAGMFDRFKGEVAELPNIPDY VGMEIKLDGERFNLNQGKIISYHRYLNVKDGELVREVEWQSPAGNITKLVFKRFVSLANLHLAGFKIKIIPVNYSGKVAI KTGYNGQVTNSGVQHFVEGDKRVLPDGKSYLTVRTQESGIFTIVAGKFRFLINASEINPQQQIVTGRRQLFLRSEYELKE NECLEMEKCVIVYTGRDLEFKDKDIDSGDIVETALTTLDKAGTKRYEELFSEHRQKWHKLWHEIDIEIGGPDFDQLAVRF AQYHLVQMTPSHDSRISVAAKGLSGEGYKGHVFWDTEIFILPFFIYTFPQIARKLLEYRYHTLDGARKKARENGYKGAMY PWESADTGEETTPEFGEVDIKTGKPIRIWCGEIEQHITADVAYAIWHYYQVTGDKEFMYNYGTEIFMETARFWASRLEYN QGLDRYEIKDVIGPDEYSEHVNNNAYTNYMVKWHLEKAIDIYNWLSDDSRDILEKIINKIALKEDELNEWKKKKDKIYLP FQEDSKVIPQFDGFMDQDVIDISSYRGDVGAIMKAYSWDEITSSQVIKQADVVMLLYLLGEDFSHEVKEKNYHYYEPKTL HDSSLSPSIHAIMGKEIGDLDEAYRYFNKSTTIDLGRNMRSCDAGLHSASLGGIWQAVVLGFGGVKVKDNVLNIDPMLPE KWDYLNFKLKWQGMPIRVEIRNDRVSVSFLNDDKAMLKDVSVMVKGRNLQLNNNKAVVNL
Sequences:
>Translated_780_residues MAIAYNLGKGEYKNWIISETEFNENNLPKFETIFSLGNGYMGLRAATEEHYFNETRGCYVAGMFDRFKGEVAELPNIPDY VGMEIKLDGERFNLNQGKIISYHRYLNVKDGELVREVEWQSPAGNITKLVFKRFVSLANLHLAGFKIKIIPVNYSGKVAI KTGYNGQVTNSGVQHFVEGDKRVLPDGKSYLTVRTQESGIFTIVAGKFRFLINASEINPQQQIVTGRRQLFLRSEYELKE NECLEMEKCVIVYTGRDLEFKDKDIDSGDIVETALTTLDKAGTKRYEELFSEHRQKWHKLWHEIDIEIGGPDFDQLAVRF AQYHLVQMTPSHDSRISVAAKGLSGEGYKGHVFWDTEIFILPFFIYTFPQIARKLLEYRYHTLDGARKKARENGYKGAMY PWESADTGEETTPEFGEVDIKTGKPIRIWCGEIEQHITADVAYAIWHYYQVTGDKEFMYNYGTEIFMETARFWASRLEYN QGLDRYEIKDVIGPDEYSEHVNNNAYTNYMVKWHLEKAIDIYNWLSDDSRDILEKIINKIALKEDELNEWKKKKDKIYLP FQEDSKVIPQFDGFMDQDVIDISSYRGDVGAIMKAYSWDEITSSQVIKQADVVMLLYLLGEDFSHEVKEKNYHYYEPKTL HDSSLSPSIHAIMGKEIGDLDEAYRYFNKSTTIDLGRNMRSCDAGLHSASLGGIWQAVVLGFGGVKVKDNVLNIDPMLPE KWDYLNFKLKWQGMPIRVEIRNDRVSVSFLNDDKAMLKDVSVMVKGRNLQLNNNKAVVNL >Mature_779_residues AIAYNLGKGEYKNWIISETEFNENNLPKFETIFSLGNGYMGLRAATEEHYFNETRGCYVAGMFDRFKGEVAELPNIPDYV GMEIKLDGERFNLNQGKIISYHRYLNVKDGELVREVEWQSPAGNITKLVFKRFVSLANLHLAGFKIKIIPVNYSGKVAIK TGYNGQVTNSGVQHFVEGDKRVLPDGKSYLTVRTQESGIFTIVAGKFRFLINASEINPQQQIVTGRRQLFLRSEYELKEN ECLEMEKCVIVYTGRDLEFKDKDIDSGDIVETALTTLDKAGTKRYEELFSEHRQKWHKLWHEIDIEIGGPDFDQLAVRFA QYHLVQMTPSHDSRISVAAKGLSGEGYKGHVFWDTEIFILPFFIYTFPQIARKLLEYRYHTLDGARKKARENGYKGAMYP WESADTGEETTPEFGEVDIKTGKPIRIWCGEIEQHITADVAYAIWHYYQVTGDKEFMYNYGTEIFMETARFWASRLEYNQ GLDRYEIKDVIGPDEYSEHVNNNAYTNYMVKWHLEKAIDIYNWLSDDSRDILEKIINKIALKEDELNEWKKKKDKIYLPF QEDSKVIPQFDGFMDQDVIDISSYRGDVGAIMKAYSWDEITSSQVIKQADVVMLLYLLGEDFSHEVKEKNYHYYEPKTLH DSSLSPSIHAIMGKEIGDLDEAYRYFNKSTTIDLGRNMRSCDAGLHSASLGGIWQAVVLGFGGVKVKDNVLNIDPMLPEK WDYLNFKLKWQGMPIRVEIRNDRVSVSFLNDDKAMLKDVSVMVKGRNLQLNNNKAVVNL
Specific function: Hydrolyzes kojibiose in the presence of an inorganic phosphoric acid to form D-glucose and beta-D-glucose-1-phosphoric acid. Can act with alpha-1,2-oligoglucans, such as selaginose, as substrate, but more slowly. Inactive when dissaccharides with linkages
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=447, Percent_Identity=29.5302013422819, Blast_Score=176, Evalue=6e-44, Organism=Escherichia coli, GI1787575, Length=741, Percent_Identity=39.8110661268556, Blast_Score=557, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6325283, Length=522, Percent_Identity=24.904214559387, Blast_Score=144, Evalue=6e-35, Organism=Drosophila melanogaster, GI24583760, Length=351, Percent_Identity=27.6353276353276, Blast_Score=120, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: =2.4.1.230 [H]
Molecular weight: Translated: 90032; Mature: 89901
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAYNLGKGEYKNWIISETEFNENNLPKFETIFSLGNGYMGLRAATEEHYFNETRGCYV CEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCCCCEEE AGMFDRFKGEVAELPNIPDYVGMEIKLDGERFNLNQGKIISYHRYLNVKDGELVREVEWQ EECHHHHCCHHHHCCCCCCCCCEEEEECCCEEECCCCCEEEEEEEEECCCCCHHHEECCC SPAGNITKLVFKRFVSLANLHLAGFKIKIIPVNYSGKVAIKTGYNGQVTNSGVQHFVEGD CCCCHHHHHHHHHHHHHHCEEEECEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHCCC KRVLPDGKSYLTVRTQESGIFTIVAGKFRFLINASEINPQQQIVTGRRQLFLRSEYELKE CEECCCCCCEEEEEECCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCC NECLEMEKCVIVYTGRDLEFKDKDIDSGDIVETALTTLDKAGTKRYEELFSEHRQKWHKL CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WHEIDIEIGGPDFDQLAVRFAQYHLVQMTPSHDSRISVAAKGLSGEGYKGHVFWDTEIFI HHEEEEEECCCCHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCHHHH LPFFIYTFPQIARKLLEYRYHTLDGARKKARENGYKGAMYPWESADTGEETTPEFGEVDI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE KTGKPIRIWCGEIEQHITADVAYAIWHYYQVTGDKEFMYNYGTEIFMETARFWASRLEYN CCCCEEEEEECHHHHHHHHHHHHHHHEEEEECCCHHEEHHCCHHHHHHHHHHHHHHHHHH QGLDRYEIKDVIGPDEYSEHVNNNAYTNYMVKWHLEKAIDIYNWLSDDSRDILEKIINKI CCCCCEEHHHCCCCCHHHHHCCCCCEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH ALKEDELNEWKKKKDKIYLPFQEDSKVIPQFDGFMDQDVIDISSYRGDVGAIMKAYSWDE HCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHCCCCHHHHHHHCCCCH ITSSQVIKQADVVMLLYLLGEDFSHEVKEKNYHYYEPKTLHDSSLSPSIHAIMGKEIGDL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCH DEAYRYFNKSTTIDLGRNMRSCDAGLHSASLGGIWQAVVLGFGGVKVKDNVLNIDPMLPE HHHHHHHCCCCEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCC KWDYLNFKLKWQGMPIRVEIRNDRVSVSFLNDDKAMLKDVSVMVKGRNLQLNNNKAVVNL CCCEEEEEEEECCCEEEEEEECCEEEEEEECCCHHHHHHEEEEEECCEEEECCCEEEEEC >Mature Secondary Structure AIAYNLGKGEYKNWIISETEFNENNLPKFETIFSLGNGYMGLRAATEEHYFNETRGCYV EEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCCCCEEE AGMFDRFKGEVAELPNIPDYVGMEIKLDGERFNLNQGKIISYHRYLNVKDGELVREVEWQ EECHHHHCCHHHHCCCCCCCCCEEEEECCCEEECCCCCEEEEEEEEECCCCCHHHEECCC SPAGNITKLVFKRFVSLANLHLAGFKIKIIPVNYSGKVAIKTGYNGQVTNSGVQHFVEGD CCCCHHHHHHHHHHHHHHCEEEECEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHCCC KRVLPDGKSYLTVRTQESGIFTIVAGKFRFLINASEINPQQQIVTGRRQLFLRSEYELKE CEECCCCCCEEEEEECCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCC NECLEMEKCVIVYTGRDLEFKDKDIDSGDIVETALTTLDKAGTKRYEELFSEHRQKWHKL CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WHEIDIEIGGPDFDQLAVRFAQYHLVQMTPSHDSRISVAAKGLSGEGYKGHVFWDTEIFI HHEEEEEECCCCHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCHHHH LPFFIYTFPQIARKLLEYRYHTLDGARKKARENGYKGAMYPWESADTGEETTPEFGEVDI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE KTGKPIRIWCGEIEQHITADVAYAIWHYYQVTGDKEFMYNYGTEIFMETARFWASRLEYN CCCCEEEEEECHHHHHHHHHHHHHHHEEEEECCCHHEEHHCCHHHHHHHHHHHHHHHHHH QGLDRYEIKDVIGPDEYSEHVNNNAYTNYMVKWHLEKAIDIYNWLSDDSRDILEKIINKI CCCCCEEHHHCCCCCHHHHHCCCCCEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH ALKEDELNEWKKKKDKIYLPFQEDSKVIPQFDGFMDQDVIDISSYRGDVGAIMKAYSWDE HCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHCCCCHHHHHHHCCCCH ITSSQVIKQADVVMLLYLLGEDFSHEVKEKNYHYYEPKTLHDSSLSPSIHAIMGKEIGDL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCH DEAYRYFNKSTTIDLGRNMRSCDAGLHSASLGGIWQAVVLGFGGVKVKDNVLNIDPMLPE HHHHHHHCCCCEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCC KWDYLNFKLKWQGMPIRVEIRNDRVSVSFLNDDKAMLKDVSVMVKGRNLQLNNNKAVVNL CCCEEEEEEEECCCEEEEEEECCEEEEEEECCCHHHHHHEEEEEECCEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA