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The map label for this gene is yvrB [H]

Identifier: 220930868

GI number: 220930868

Start: 26191

End: 27204

Strand: Direct

Name: yvrB [H]

Synonym: Hore_00180

Alternate gene names: 220930868

Gene position: 26191-27204 (Clockwise)

Preceding gene: 220930867

Following gene: 220930869

Centisome position: 1.02

GC content: 37.48

Gene sequence:

>1014_bases
ATGAAACTAAATTATTCGAGAAAAATAATTTTCCTGGCTTTAATAGTATTATTGATAGTAGTCTTTATATTATCTTTAGC
AGTCGGGTCGGTTCATATACCCATTCATCAAATTTGGGCAATTATACTGGACCATGCAGATAGTAATGAAACCTATAAAA
TAATTATAAAGGATATCAGGCTTCCCCGGATTATTCTAAGTTTCCTGGTTGGTTCAGCTCTGGCTGTATCCGGGGTTGTG
TTTCAGGGAGTTATCAGAAATCCCATGGTTGATCCCTATATAATTGGAGTTTCAGCCGGAGCTGGAACAGCTGTTACCCT
GGCTATTTTATTTAACTGGAGTATTACCTTTCTGTGGTTTGATACTATGCCAATTATGGCTTTTCTGGGGTCTTTATTGA
CGATTTTTACTGTATACAGGATGGCACGGGTTAACAAAAAAACTCCGGTAACTACTTTTTTACTGGCTGGTGTAGCGGTT
GGCTTTCTGTTAAATGCAGTTATGTCTTTTTTGATGGTTTTTGTTACCGGTGATCTGTATAAAGTTGTTTACTGGTTAAT
GGGGAGTTTGATTACAGAAGGCTGGAAAGAAGTAAAGATAATAGTTCCGTATTATATACTGGGTTTAATACCTGTCGTTT
TTTATTTAAAAGATTTAAACATACTTTTACTGGGTGAAGAGAGTGCCCATAACCTGGGGGTTAATGTAGAAAGGGTTAAA
TCAATTTTGATTTTTTCAGGTGCTTTATTAACCGCAGCAGCTGTATCTGTCAGTGGAATAATAGGTTTTATTGGATTAAT
AGTTCCCCATATTTCAAGGCTTATTATTGGCCCTGACCACCGGCGTTTGCTGCCTTTTTCATGGCTTCTCGGAGGTTTAT
TTCTGGTTGTAAGTGATGATCTGGCCCGGACATTAATTAAACCATCGGAGATACCGGTCGGTATTATTACGGCCCTGGTA
GGGGCTCCTTATTTTATATATCTTCTAAAGAAAAAGAAGGATAATTTATGGTGA

Upstream 100 bases:

>100_bases
CAACCTTAAACTGTTCCTGTATGTTTTATTTAGATACGGAGCACCTGTGGTGACAACATCATTATTAATTATCCATAAAA
AATAATTAAGGTGACTAACT

Downstream 100 bases:

>100_bases
TGCAAAATGATTGAAATTAAAAACCTCAATTTTGGATATTATAATAAGGCAATACTGAAGAATGTTTCGCTGTCTATTGA
AAACAAGGAGTTTATAGGTA

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKLNYSRKIIFLALIVLLIVVFILSLAVGSVHIPIHQIWAIILDHADSNETYKIIIKDIRLPRIILSFLVGSALAVSGVV
FQGVIRNPMVDPYIIGVSAGAGTAVTLAILFNWSITFLWFDTMPIMAFLGSLLTIFTVYRMARVNKKTPVTTFLLAGVAV
GFLLNAVMSFLMVFVTGDLYKVVYWLMGSLITEGWKEVKIIVPYYILGLIPVVFYLKDLNILLLGEESAHNLGVNVERVK
SILIFSGALLTAAAVSVSGIIGFIGLIVPHISRLIIGPDHRRLLPFSWLLGGLFLVVSDDLARTLIKPSEIPVGIITALV
GAPYFIYLLKKKKDNLW

Sequences:

>Translated_337_residues
MKLNYSRKIIFLALIVLLIVVFILSLAVGSVHIPIHQIWAIILDHADSNETYKIIIKDIRLPRIILSFLVGSALAVSGVV
FQGVIRNPMVDPYIIGVSAGAGTAVTLAILFNWSITFLWFDTMPIMAFLGSLLTIFTVYRMARVNKKTPVTTFLLAGVAV
GFLLNAVMSFLMVFVTGDLYKVVYWLMGSLITEGWKEVKIIVPYYILGLIPVVFYLKDLNILLLGEESAHNLGVNVERVK
SILIFSGALLTAAAVSVSGIIGFIGLIVPHISRLIIGPDHRRLLPFSWLLGGLFLVVSDDLARTLIKPSEIPVGIITALV
GAPYFIYLLKKKKDNLW
>Mature_337_residues
MKLNYSRKIIFLALIVLLIVVFILSLAVGSVHIPIHQIWAIILDHADSNETYKIIIKDIRLPRIILSFLVGSALAVSGVV
FQGVIRNPMVDPYIIGVSAGAGTAVTLAILFNWSITFLWFDTMPIMAFLGSLLTIFTVYRMARVNKKTPVTTFLLAGVAV
GFLLNAVMSFLMVFVTGDLYKVVYWLMGSLITEGWKEVKIIVPYYILGLIPVVFYLKDLNILLLGEESAHNLGVNVERVK
SILIFSGALLTAAAVSVSGIIGFIGLIVPHISRLIIGPDHRRLLPFSWLLGGLFLVVSDDLARTLIKPSEIPVGIITALV
GAPYFIYLLKKKKDNLW

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=311, Percent_Identity=36.3344051446945, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1788004, Length=291, Percent_Identity=36.426116838488, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=31.4685314685315, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1786805, Length=312, Percent_Identity=31.0897435897436, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786804, Length=341, Percent_Identity=31.0850439882698, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1786347, Length=281, Percent_Identity=33.0960854092527, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37193; Mature: 37193

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNYSRKIIFLALIVLLIVVFILSLAVGSVHIPIHQIWAIILDHADSNETYKIIIKDIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHCCCCCCEEEEEEECCC
LPRIILSFLVGSALAVSGVVFQGVIRNPMVDPYIIGVSAGAGTAVTLAILFNWSITFLWF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEH
DTMPIMAFLGSLLTIFTVYRMARVNKKTPVTTFLLAGVAVGFLLNAVMSFLMVFVTGDLY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
KVVYWLMGSLITEGWKEVKIIVPYYILGLIPVVFYLKDLNILLLGEESAHNLGVNVERVK
HHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH
SILIFSGALLTAAAVSVSGIIGFIGLIVPHISRLIIGPDHRRLLPFSWLLGGLFLVVSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LARTLIKPSEIPVGIITALVGAPYFIYLLKKKKDNLW
HHHHHCCCCCCCHHHHHHHHCCHHEEEEEECCCCCCC
>Mature Secondary Structure
MKLNYSRKIIFLALIVLLIVVFILSLAVGSVHIPIHQIWAIILDHADSNETYKIIIKDIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHCCCCCCEEEEEEECCC
LPRIILSFLVGSALAVSGVVFQGVIRNPMVDPYIIGVSAGAGTAVTLAILFNWSITFLWF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEH
DTMPIMAFLGSLLTIFTVYRMARVNKKTPVTTFLLAGVAVGFLLNAVMSFLMVFVTGDLY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
KVVYWLMGSLITEGWKEVKIIVPYYILGLIPVVFYLKDLNILLLGEESAHNLGVNVERVK
HHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH
SILIFSGALLTAAAVSVSGIIGFIGLIVPHISRLIIGPDHRRLLPFSWLLGGLFLVVSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LARTLIKPSEIPVGIITALVGAPYFIYLLKKKKDNLW
HHHHHCCCCCCCHHHHHHHHCCHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]