| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is gufA [H]
Identifier: 220930867
GI number: 220930867
Start: 18626
End: 19411
Strand: Direct
Name: gufA [H]
Synonym: Hore_00170
Alternate gene names: 220930867
Gene position: 18626-19411 (Clockwise)
Preceding gene: 220930866
Following gene: 220930868
Centisome position: 0.72
GC content: 41.48
Gene sequence:
>786_bases ATGATTGAAGAGTATTTAAGTCATTTTAATATGGTTTATTTAGGTTTACTGGCAAGTCTGGTAGCCGGCCTGGCTACAGG TATTGGAGGATTGCCGGTTTTATTTACTAAAAATATAAGTCAAAAAATATTAAACTCAATGTTGGGGTTTGCGGCTGGAA TAATGCTGGCGGCAACTTCCTTTAGTTTAATAATTCCAGCTATAAGTTATGGTGGTGGCGGGGTTAAAGGGGCTTCAATA GCTTTTTTTGGAATAATCCTGGGAGGTTTTTTTCTGGACTCAATCGACCGTTATTTTCCTAATACTAATTTGCTATCAGG TTCAATTGACGAAAACCCTAACCTCAAAAGGATCTGGCTTTTTGCAACAGCAATTACCCTGCACAATTTTCCTGAAGGAT TAGCAGTCGGGGTTGGTTTCGGTAATGGAGATGTTTTAAATGGTATGAGTCTCGCCATAGCTATTGGGTTACAGAATATC CCGGAAGGACTGGCTGTAGCCTTACCCTTTGTCCGGGAGGGTGTTAATAAGTGGAAGGCAGTAGGTATAGCCCTGGCTAC GGGTCTTGTGGAGCCAGTTGGAGGAATACTTGGAGCCGGTTTAGTTCAGATATCACGACCCCTGTTACCGGTATTTCTTG CCTTTGCTGCTGGAGCCATGTTATTTGTTATCAGCTATGAAATAATACCGGAAAGCCAGAAAGATGCCATGTTCTCTAAA CTATCTTCCCATGCCCTTCTACTGGGATTTGTTATTATGATGTTTTTAGACAATGTTCTCGGTTAA
Upstream 100 bases:
>100_bases AGGAGTAATTTTAAATTATACCCTGCCTCTGTTCACTGGATAAGCACCTGATGAATAGTATATGGGTGATGATTTCCGGT GAAAAGGGGGTAGGGTTATT
Downstream 100 bases:
>100_bases TCTCAAAAAAATCCTTGACAAGAGGGACTAATGATGTTAAGATAATAATCGCGCCTCAAAAAAAGAGGCCATAACAACAG AGTCAAGGGTTCAGGCTGAT
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIEEYLSHFNMVYLGLLASLVAGLATGIGGLPVLFTKNISQKILNSMLGFAAGIMLAATSFSLIIPAISYGGGGVKGASI AFFGIILGGFFLDSIDRYFPNTNLLSGSIDENPNLKRIWLFATAITLHNFPEGLAVGVGFGNGDVLNGMSLAIAIGLQNI PEGLAVALPFVREGVNKWKAVGIALATGLVEPVGGILGAGLVQISRPLLPVFLAFAAGAMLFVISYEIIPESQKDAMFSK LSSHALLLGFVIMMFLDNVLG
Sequences:
>Translated_261_residues MIEEYLSHFNMVYLGLLASLVAGLATGIGGLPVLFTKNISQKILNSMLGFAAGIMLAATSFSLIIPAISYGGGGVKGASI AFFGIILGGFFLDSIDRYFPNTNLLSGSIDENPNLKRIWLFATAITLHNFPEGLAVGVGFGNGDVLNGMSLAIAIGLQNI PEGLAVALPFVREGVNKWKAVGIALATGLVEPVGGILGAGLVQISRPLLPVFLAFAAGAMLFVISYEIIPESQKDAMFSK LSSHALLLGFVIMMFLDNVLG >Mature_261_residues MIEEYLSHFNMVYLGLLASLVAGLATGIGGLPVLFTKNISQKILNSMLGFAAGIMLAATSFSLIIPAISYGGGGVKGASI AFFGIILGGFFLDSIDRYFPNTNLLSGSIDENPNLKRIWLFATAITLHNFPEGLAVGVGFGNGDVLNGMSLAIAIGLQNI PEGLAVALPFVREGVNKWKAVGIALATGLVEPVGGILGAGLVQISRPLLPVFLAFAAGAMLFVISYEIIPESQKDAMFSK LSSHALLLGFVIMMFLDNVLG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=154, Percent_Identity=49.3506493506493, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI229577422, Length=154, Percent_Identity=49.3506493506493, Blast_Score=130, Evalue=2e-30, Organism=Escherichia coli, GI1789419, Length=188, Percent_Identity=36.1702127659575, Blast_Score=78, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17507805, Length=317, Percent_Identity=34.0694006309148, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI24652846, Length=157, Percent_Identity=42.0382165605096, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 27323; Mature: 27323
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEEYLSHFNMVYLGLLASLVAGLATGIGGLPVLFTKNISQKILNSMLGFAAGIMLAATS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLIIPAISYGGGGVKGASIAFFGIILGGFFLDSIDRYFPNTNLLSGSIDENPNLKRIWL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHH FATAITLHNFPEGLAVGVGFGNGDVLNGMSLAIAIGLQNIPEGLAVALPFVREGVNKWKA HHHHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VGIALATGLVEPVGGILGAGLVQISRPLLPVFLAFAAGAMLFVISYEIIPESQKDAMFSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LSSHALLLGFVIMMFLDNVLG HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEEYLSHFNMVYLGLLASLVAGLATGIGGLPVLFTKNISQKILNSMLGFAAGIMLAATS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLIIPAISYGGGGVKGASIAFFGIILGGFFLDSIDRYFPNTNLLSGSIDENPNLKRIWL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHH FATAITLHNFPEGLAVGVGFGNGDVLNGMSLAIAIGLQNIPEGLAVALPFVREGVNKWKA HHHHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VGIALATGLVEPVGGILGAGLVQISRPLLPVFLAFAAGAMLFVISYEIIPESQKDAMFSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LSSHALLLGFVIMMFLDNVLG HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]