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The map label for this gene is yndE [H]

Identifier: 220930861

GI number: 220930861

Start: 12699

End: 13796

Strand: Direct

Name: yndE [H]

Synonym: Hore_00110

Alternate gene names: 220930861

Gene position: 12699-13796 (Clockwise)

Preceding gene: 220930860

Following gene: 220930862

Centisome position: 0.49

GC content: 39.53

Gene sequence:

>1098_bases
ATGAAAGAACACGGTAAATTAAGTGAAAGGCAGTTTGCCGGGATCATTGCCAACACCATGGTCGGGGTCGGGGTATTAAT
ATTACCTAAAACGGCAACTAAATTTGCCGGTACAGCCGGCTGGATTGCCCTTCTGCTGGGGGGAGTTATTGCCCTTTTTT
TTCTGTTTCTTATCTTAAAACTGGGGACCCGCTTTCCGGAAAATACCTTAATGGAGTATGCCCCTCGTATTATCGGGAAA
ATACCGGGTACCCTGGTTTCGCTCATCTTCTGTACTTACTGGTTTTTATTGAGTAGTTTAATATTCAGGGTTTTTGCAGA
AATGATGGTTGATGCAATTTTATTAAATACCCCCATTGAAGTGATAATTATCTCTATGTTAATTCTGGTAGCCTACCTCT
CCAGGCATGATGTAGAGGTCTTCGGGAGGGTTAATGAATTGTTCTTTATCTTCCTAATAATACCGGCTGTTTTTGGACTG
GCTGTTTCCCTTAAACAGGTGACCGGGATAAAACTTCTTCCGTTGCTGGGAAATGGACTTCCCTCTATTTTAATTAACAC
CAGGGAACTGTTTTTTTCCTTTGTTGGCTTTGAAATTATATTTCTGTTTATCCCTTCTATAACTACCCTGGGTAAAGTAT
ATAACTATGGGTTTAAAGGATGGTTATCCCCTGCAGCAATTTATCTGGCTGTAGTTATTATTGGAATAGGAGTGTTTGGA
ACCAGGGAACTTCAGAACTTAATGTGGCCGACCCTGGAGCTGGTTAAGGTGATCAATTTCCCAGGACTCATTTTAGAAAG
GGTTGAGGCTATTTTTATTGCCTTCTGGGTAATAGCTGTTTTTACCACGGTTACTAATTTATTTTATAGTTCGGTGGTAG
GGGCTACCCAGGTTTTAAAATTATCTGACCATAAAACTCTGGTATACCCCCTACTTCCTTTGTTTTATTTTTTTAGTACC
TATCCCCAAAATATATATGAAGTATTAAATTATATGAATGTCATGGGGAAGTTTGGAGGGTTAGTAATTATAACCGTGAC
TCCCCTGTTGTATATTATCTCTCTCATTAGAAATATTAAAGGGGGACAGAAGGCATGA

Upstream 100 bases:

>100_bases
CTGGTGGTCAGGGCACCCTTCTGGTTAATGTATAGACGACCTAAATATTTGCGGACTAAAGATGAAAAGAGGTTTTCCTC
AAAAGGGGATGATGACCAGA

Downstream 100 bases:

>100_bases
AATCACGAATTCTACCAGCAATAATGGTTATAGTTTTAATATCTATCCTGTTAACAGGGTGCTGGGATTTAAAGGATATA
GATGAGAGGGCAACAGTTCT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKEHGKLSERQFAGIIANTMVGVGVLILPKTATKFAGTAGWIALLLGGVIALFFLFLILKLGTRFPENTLMEYAPRIIGK
IPGTLVSLIFCTYWFLLSSLIFRVFAEMMVDAILLNTPIEVIIISMLILVAYLSRHDVEVFGRVNELFFIFLIIPAVFGL
AVSLKQVTGIKLLPLLGNGLPSILINTRELFFSFVGFEIIFLFIPSITTLGKVYNYGFKGWLSPAAIYLAVVIIGIGVFG
TRELQNLMWPTLELVKVINFPGLILERVEAIFIAFWVIAVFTTVTNLFYSSVVGATQVLKLSDHKTLVYPLLPLFYFFST
YPQNIYEVLNYMNVMGKFGGLVIITVTPLLYIISLIRNIKGGQKA

Sequences:

>Translated_365_residues
MKEHGKLSERQFAGIIANTMVGVGVLILPKTATKFAGTAGWIALLLGGVIALFFLFLILKLGTRFPENTLMEYAPRIIGK
IPGTLVSLIFCTYWFLLSSLIFRVFAEMMVDAILLNTPIEVIIISMLILVAYLSRHDVEVFGRVNELFFIFLIIPAVFGL
AVSLKQVTGIKLLPLLGNGLPSILINTRELFFSFVGFEIIFLFIPSITTLGKVYNYGFKGWLSPAAIYLAVVIIGIGVFG
TRELQNLMWPTLELVKVINFPGLILERVEAIFIAFWVIAVFTTVTNLFYSSVVGATQVLKLSDHKTLVYPLLPLFYFFST
YPQNIYEVLNYMNVMGKFGGLVIITVTPLLYIISLIRNIKGGQKA
>Mature_365_residues
MKEHGKLSERQFAGIIANTMVGVGVLILPKTATKFAGTAGWIALLLGGVIALFFLFLILKLGTRFPENTLMEYAPRIIGK
IPGTLVSLIFCTYWFLLSSLIFRVFAEMMVDAILLNTPIEVIIISMLILVAYLSRHDVEVFGRVNELFFIFLIIPAVFGL
AVSLKQVTGIKLLPLLGNGLPSILINTRELFFSFVGFEIIFLFIPSITTLGKVYNYGFKGWLSPAAIYLAVVIIGIGVFG
TRELQNLMWPTLELVKVINFPGLILERVEAIFIAFWVIAVFTTVTNLFYSSVVGATQVLKLSDHKTLVYPLLPLFYFFST
YPQNIYEVLNYMNVMGKFGGLVIITVTPLLYIISLIRNIKGGQKA

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40674; Mature: 40674

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEHGKLSERQFAGIIANTMVGVGVLILPKTATKFAGTAGWIALLLGGVIALFFLFLILK
CCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LGTRFPENTLMEYAPRIIGKIPGTLVSLIFCTYWFLLSSLIFRVFAEMMVDAILLNTPIE
HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VIIISMLILVAYLSRHDVEVFGRVNELFFIFLIIPAVFGLAVSLKQVTGIKLLPLLGNGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCC
PSILINTRELFFSFVGFEIIFLFIPSITTLGKVYNYGFKGWLSPAAIYLAVVIIGIGVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
TRELQNLMWPTLELVKVINFPGLILERVEAIFIAFWVIAVFTTVTNLFYSSVVGATQVLK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LSDHKTLVYPLLPLFYFFSTYPQNIYEVLNYMNVMGKFGGLVIITVTPLLYIISLIRNIK
ECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCC
GGQKA
CCCCC
>Mature Secondary Structure
MKEHGKLSERQFAGIIANTMVGVGVLILPKTATKFAGTAGWIALLLGGVIALFFLFLILK
CCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LGTRFPENTLMEYAPRIIGKIPGTLVSLIFCTYWFLLSSLIFRVFAEMMVDAILLNTPIE
HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VIIISMLILVAYLSRHDVEVFGRVNELFFIFLIIPAVFGLAVSLKQVTGIKLLPLLGNGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCC
PSILINTRELFFSFVGFEIIFLFIPSITTLGKVYNYGFKGWLSPAAIYLAVVIIGIGVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
TRELQNLMWPTLELVKVINFPGLILERVEAIFIAFWVIAVFTTVTNLFYSSVVGATQVLK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LSDHKTLVYPLLPLFYFFSTYPQNIYEVLNYMNVMGKFGGLVIITVTPLLYIISLIRNIK
ECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCC
GGQKA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]