| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230928
Identifier: 221230928
GI number: 221230928
Start: 3234837
End: 3236531
Strand: Reverse
Name: 221230928
Synonym: MLBr_02687
Alternate gene names: NA
Gene position: 3236531-3234837 (Counterclockwise)
Preceding gene: 221230929
Following gene: 221230927
Centisome position: 99.03
GC content: 59.76
Gene sequence:
>1695_bases GTGATCAACGCTCAGACGCACAGTACCACTATCTCGCCGCGGCCGTTGGCCGCTGATCGCCAGAGCGCCGATAACCGTGA TTGCCCCAGCCGCACAGACTATTTGGGCGCCGCCCTAGCAGATGCGATCGGTGGACCGGTAGGTTGCCATGCGCTGATCG GCCGTAGTTGGCTGATGACACCGCTCCGGGTGATGTTTCTTATCGGGCTGGTATTCTTGGCGCTCGGCTGGTCAACGAAG GCGGCCTGCTTGCAAACCACCGGAACGGGGCCGGGCGGTCAGCGGGTCCCCAATTGGGATAACCAGCGCGCATATTACGA GTTGTGCTATTCTGACATAGTGCCGCTCTACGGCACAGAGTTGTTGAGCCAAGGTAAGTTTCCGTACAAATCCAGTTGGA TCGAAACCGACAGTAGCGGCACACCGCGGACCCGCTATGACGGTCGGCTGGCGGTGCGGTACATGGAGTATCCGGTGTTA ACCGGTATTTATCAGTATGTATCGATGGCGGTGGCCAAGAGCTACACGGCTTTAAGCGAGCCCGTCAGCCTACCGGCGGT CGCCGAGGTGGTGATGTTCTTCGACGTTGTTGCATTCGGGCTGGCATTGGCCTGGTTAGCGACTATCTGGGCCACCGCCG GGCTGGCGGGCCTCCGGATTTGGGATGCAGCCTTGGTCGCCGCATCCCCGCTGGTGATTTTTCAGGTGTTCACCAACTTC GACGCGTTGGCCATAGCATTCGCGACTGGTGGATTGCTAGCGTGGTCGCGGTGCAGACCGATATCTGCTGGTGTGCTGAT CGGGTTAGGTGCCGCGGCCAAGCTCTATCCGCTGCTGTTTTTGGTCCCGTTGTTTGTGTTGGGCGTCCGCACCGGACGCC TCGGGGGTGTGGCTTGCGCCGCGGTGACCGCGGCAACAACCTGGTTGTTGGTGAATCTTCCTGTGCTATTACTTTTCCCA CGCGGCTGGTCGGAGTTTTTCCGGTTTAACACTCGCCGTGGGGACGACATGGACTCGTTGTATAACGTCGTGAAATCGCT TACTGGCTGGCGCGGTTTCGATACCAAGCTGGGTTTCTGCGAGCTACCCCTGGTTCTAAACACCGTAGTAACGGTGTTGT TCGCATTGTGTTGTGCAGCAGTAGCTTATATTGCGCTGACTGCTGCACAACGGCCACGAGTGGTTCAGTTAGCGTTTTTG CTGGTGGCGGTATTTTTGTTGACCAACAAGGTCTGGAGCCCCCAGTTCTCGCTGTGGCTGGTGCCGCTGGCAGTGTTGGC CTTGCCGCACCGCCGGGTGCTGCTGGCGTGGATGACGATCGATGCTCTGGTGTGGGTGCCGCGGATGTATTACCTTTACG GCAATCCGAGCCGTTCGCTCCCGGAGCAGTGGTTCACCGCGACGGTGCTGTTGCGCGATATTGCGGTCGTGGCGCTGTGC GCGCTGGTGATTCGTCAAATTTATCGGCCTGACGAAGATCCAGTGCGACTGGGTGGACGGGTGGATGATCCGGCGGGCGG ACCTTTCGACCGCGCCCCGTACGCCCCGCCCAGCTGGCTGCCGGACTGGCTGCATCCAGCTGGGATGCGGCGGGTAGTCA CGTTGGCAGCATCATCAGTGACTGAAACCGAGCTGGCCGCCGCTGCAACGCCTTCTGGCCCCATGCACCATCCCCATGCA CCATCTAGTATATGA
Upstream 100 bases:
>100_bases AAGTAGCGCCGGGCATAATCATACCGGTCGGCCCGCCCACGACGGTCACTGTCCCGCCGACGCAGGCATTGCCCGACCTA ACAACTTCAACAACGCCACC
Downstream 100 bases:
>100_bases GGTGTGCACAGAAAACGAGATGCTCGGTCTCACCTGCGATGCTATACTTCGACAAAGTCGGTGCATCCGATGTAGGTGGT GTTCCCTGACGGTGTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane Protein-Like Protein
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MINAQTHSTTISPRPLAADRQSADNRDCPSRTDYLGAALADAIGGPVGCHALIGRSWLMTPLRVMFLIGLVFLALGWSTK AACLQTTGTGPGGQRVPNWDNQRAYYELCYSDIVPLYGTELLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVL TGIYQYVSMAVAKSYTALSEPVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVIFQVFTNF DALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRTGRLGGVACAAVTAATTWLLVNLPVLLLFP RGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGFDTKLGFCELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFL LVAVFLLTNKVWSPQFSLWLVPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRDIAVVALC ALVIRQIYRPDEDPVRLGGRVDDPAGGPFDRAPYAPPSWLPDWLHPAGMRRVVTLAASSVTETELAAAATPSGPMHHPHA PSSI
Sequences:
>Translated_564_residues MINAQTHSTTISPRPLAADRQSADNRDCPSRTDYLGAALADAIGGPVGCHALIGRSWLMTPLRVMFLIGLVFLALGWSTK AACLQTTGTGPGGQRVPNWDNQRAYYELCYSDIVPLYGTELLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVL TGIYQYVSMAVAKSYTALSEPVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVIFQVFTNF DALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRTGRLGGVACAAVTAATTWLLVNLPVLLLFP RGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGFDTKLGFCELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFL LVAVFLLTNKVWSPQFSLWLVPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRDIAVVALC ALVIRQIYRPDEDPVRLGGRVDDPAGGPFDRAPYAPPSWLPDWLHPAGMRRVVTLAASSVTETELAAAATPSGPMHHPHA PSSI >Mature_564_residues MINAQTHSTTISPRPLAADRQSADNRDCPSRTDYLGAALADAIGGPVGCHALIGRSWLMTPLRVMFLIGLVFLALGWSTK AACLQTTGTGPGGQRVPNWDNQRAYYELCYSDIVPLYGTELLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVL TGIYQYVSMAVAKSYTALSEPVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVIFQVFTNF DALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRTGRLGGVACAAVTAATTWLLVNLPVLLLFP RGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGFDTKLGFCELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFL LVAVFLLTNKVWSPQFSLWLVPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRDIAVVALC ALVIRQIYRPDEDPVRLGGRVDDPAGGPFDRAPYAPPSWLPDWLHPAGMRRVVTLAASSVTETELAAAATPSGPMHHPHA PSSI
Specific function: Unknown
COG id: COG5650
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61424; Mature: 61424
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAQTHSTTISPRPLAADRQSADNRDCPSRTDYLGAALADAIGGPVGCHALIGRSWLMT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHH PLRVMFLIGLVFLALGWSTKAACLQTTGTGPGGQRVPNWDNQRAYYELCYSDIVPLYGTE HHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHH LLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVLTGIYQYVSMAVAKSYTALSE HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC PVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVIFQVFTNF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHCC DALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRTGRLGGVACA HHHHHHHHHCCHHHHHCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVTAATTWLLVNLPVLLLFPRGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGFDTKLGFC HHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH ELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFLLVAVFLLTNKVWSPQFSLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH VPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRDIAVVALC HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALVIRQIYRPDEDPVRLGGRVDDPAGGPFDRAPYAPPSWLPDWLHPAGMRRVVTLAASSV HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH TETELAAAATPSGPMHHPHAPSSI HHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MINAQTHSTTISPRPLAADRQSADNRDCPSRTDYLGAALADAIGGPVGCHALIGRSWLMT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHH PLRVMFLIGLVFLALGWSTKAACLQTTGTGPGGQRVPNWDNQRAYYELCYSDIVPLYGTE HHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHH LLSQGKFPYKSSWIETDSSGTPRTRYDGRLAVRYMEYPVLTGIYQYVSMAVAKSYTALSE HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC PVSLPAVAEVVMFFDVVAFGLALAWLATIWATAGLAGLRIWDAALVAASPLVIFQVFTNF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHCC DALAIAFATGGLLAWSRCRPISAGVLIGLGAAAKLYPLLFLVPLFVLGVRTGRLGGVACA HHHHHHHHHCCHHHHHCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVTAATTWLLVNLPVLLLFPRGWSEFFRFNTRRGDDMDSLYNVVKSLTGWRGFDTKLGFC HHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH ELPLVLNTVVTVLFALCCAAVAYIALTAAQRPRVVQLAFLLVAVFLLTNKVWSPQFSLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH VPLAVLALPHRRVLLAWMTIDALVWVPRMYYLYGNPSRSLPEQWFTATVLLRDIAVVALC HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALVIRQIYRPDEDPVRLGGRVDDPAGGPFDRAPYAPPSWLPDWLHPAGMRRVVTLAASSV HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH TETELAAAATPSGPMHHPHAPSSI HHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA