Click here to switch to the map view.

The map label for this gene is ybgK [H]

Identifier: 221230848

GI number: 221230848

Start: 3038095

End: 3039012

Strand: Direct

Name: ybgK [H]

Synonym: MLBr_02550

Alternate gene names: 221230848

Gene position: 3038095-3039012 (Clockwise)

Preceding gene: 221230847

Following gene: 221230849

Centisome position: 92.96

GC content: 63.18

Gene sequence:

>918_bases
ATGACAAACCCGCCAATCAAGTTGGAGATCCTGCGTAGTGGCCCGTTTGCAGTCGTGCAGGACCTCGGTCGGGCCGGGCT
GGCTCACTTCGGCGTCGGTCGGTCCGGAGCCGCCGACCGACGCGCACACAAGCTAGCCAACCGATTGGTCGCCAACCCCG
ACGACCGCGCCACGGTCGAAGTGACGTTCGGTGGTTTCTCAGCTCGAGTTTGCGGAGGCAACGTCTATGTTGCGGTCACG
GGCGCCGACACCAACCCCACGGCTAACGGTATTGTGTTTGGCACTAACAGTATACAACATATCCGCGATGGGCAGGTGAT
CTCGCTGGGCGCACCGCATGTCGGGCTGCGGACGTATCTAGCGGTGCGCGGTGGTATCTGCGTCACCCCGGTGCTGGGTT
CACGCAGCTACGACGTTTTGTCTGCAATCGGTCCGGCGCCACTACGAGCCGGTGACGAGTTGCCAGTCGGCGACCACACC
GACCACTACCCCGCACTCGACCACGCCCCCGTGGCCGCCATCACCGGCAATCCTGTTGAGCTGCTGGTCATACCCGGGCC
GCACGACGATTGGTTCATCGATCCCGACGTACTGGTGCATACCGACTGGGTAGCCTCCGACCGCAGCGACCGGGTAGGGA
TGCGGTTGCTCGGCAGCCCCTTGCTGTACCGATACCCGGACCGTCAGCTGCCTAGCGAAGGCACCACTTGCGGAGCAATT
CAATTACCGCCCAACGGGTTACCAGTGATCCTGGGGCCCGATCACCCAGTCACTGGTGGCTACCCAGTAGCGGGCGTGGT
GATCGATGAGGACATCGACAAGCTCGCTCAGTTGCGGCCTGGCCAGCAAGTGCGGCTGCACTGGGTAAGGACCCAGTCGT
CGCCACTGGAACGACTACGGTCCGCGTCCCAGAACTGA

Upstream 100 bases:

>100_bases
CACAGTGCTGTGGGACACCAACCGGCCCAATCCCGCATTGCTGACACAGGGCATGTGGGTGCAGTTCCGTGCCACGTAAA
AGAATCGTAGAGAGCCCACC

Downstream 100 bases:

>100_bases
CTGTTCTAGTAACACCAACCCGGTAGATAAAGCCTGGTAAACTACTATGGATACCCACCACGTACATACCGCCCGCCTGG
TTCATACCGCCGATCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTNPPIKLEILRSGPFAVVQDLGRAGLAHFGVGRSGAADRRAHKLANRLVANPDDRATVEVTFGGFSARVCGGNVYVAVT
GADTNPTANGIVFGTNSIQHIRDGQVISLGAPHVGLRTYLAVRGGICVTPVLGSRSYDVLSAIGPAPLRAGDELPVGDHT
DHYPALDHAPVAAITGNPVELLVIPGPHDDWFIDPDVLVHTDWVASDRSDRVGMRLLGSPLLYRYPDRQLPSEGTTCGAI
QLPPNGLPVILGPDHPVTGGYPVAGVVIDEDIDKLAQLRPGQQVRLHWVRTQSSPLERLRSASQN

Sequences:

>Translated_305_residues
MTNPPIKLEILRSGPFAVVQDLGRAGLAHFGVGRSGAADRRAHKLANRLVANPDDRATVEVTFGGFSARVCGGNVYVAVT
GADTNPTANGIVFGTNSIQHIRDGQVISLGAPHVGLRTYLAVRGGICVTPVLGSRSYDVLSAIGPAPLRAGDELPVGDHT
DHYPALDHAPVAAITGNPVELLVIPGPHDDWFIDPDVLVHTDWVASDRSDRVGMRLLGSPLLYRYPDRQLPSEGTTCGAI
QLPPNGLPVILGPDHPVTGGYPVAGVVIDEDIDKLAQLRPGQQVRLHWVRTQSSPLERLRSASQN
>Mature_304_residues
TNPPIKLEILRSGPFAVVQDLGRAGLAHFGVGRSGAADRRAHKLANRLVANPDDRATVEVTFGGFSARVCGGNVYVAVTG
ADTNPTANGIVFGTNSIQHIRDGQVISLGAPHVGLRTYLAVRGGICVTPVLGSRSYDVLSAIGPAPLRAGDELPVGDHTD
HYPALDHAPVAAITGNPVELLVIPGPHDDWFIDPDVLVHTDWVASDRSDRVGMRLLGSPLLYRYPDRQLPSEGTTCGAIQ
LPPNGLPVILGPDHPVTGGYPVAGVVIDEDIDKLAQLRPGQQVRLHWVRTQSSPLERLRSASQN

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=301, Percent_Identity=34.21926910299, Blast_Score=142, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6319685, Length=316, Percent_Identity=28.4810126582279, Blast_Score=83, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 32389; Mature: 32258

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPPIKLEILRSGPFAVVQDLGRAGLAHFGVGRSGAADRRAHKLANRLVANPDDRATVE
CCCCCEEEEEECCCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
VTFGGFSARVCGGNVYVAVTGADTNPTANGIVFGTNSIQHIRDGQVISLGAPHVGLRTYL
EEECCEEEEEECCEEEEEEECCCCCCCCCEEEEECCCHHHCCCCCEEEECCCCCCHHHHE
AVRGGICVTPVLGSRSYDVLSAIGPAPLRAGDELPVGDHTDHYPALDHAPVAAITGNPVE
ECCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEE
LLVIPGPHDDWFIDPDVLVHTDWVASDRSDRVGMRLLGSPLLYRYPDRQLPSEGTTCGAI
EEEEECCCCCCEECCCEEEEECCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCEEEEE
QLPPNGLPVILGPDHPVTGGYPVAGVVIDEDIDKLAQLRPGQQVRLHWVRTQSSPLERLR
EECCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEEECCCHHHHHHH
SASQN
HHCCC
>Mature Secondary Structure 
TNPPIKLEILRSGPFAVVQDLGRAGLAHFGVGRSGAADRRAHKLANRLVANPDDRATVE
CCCCEEEEEECCCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
VTFGGFSARVCGGNVYVAVTGADTNPTANGIVFGTNSIQHIRDGQVISLGAPHVGLRTYL
EEECCEEEEEECCEEEEEEECCCCCCCCCEEEEECCCHHHCCCCCEEEECCCCCCHHHHE
AVRGGICVTPVLGSRSYDVLSAIGPAPLRAGDELPVGDHTDHYPALDHAPVAAITGNPVE
ECCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEE
LLVIPGPHDDWFIDPDVLVHTDWVASDRSDRVGMRLLGSPLLYRYPDRQLPSEGTTCGAI
EEEEECCCCCCEECCCEEEEECCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCEEEEE
QLPPNGLPVILGPDHPVTGGYPVAGVVIDEDIDKLAQLRPGQQVRLHWVRTQSSPLERLR
EECCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEEECCCHHHHHHH
SASQN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]