| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230627
Identifier: 221230627
GI number: 221230627
Start: 2542932
End: 2543741
Strand: Reverse
Name: 221230627
Synonym: MLBr_02142
Alternate gene names: NA
Gene position: 2543741-2542932 (Counterclockwise)
Preceding gene: 221230630
Following gene: 221230625
Centisome position: 77.84
GC content: 63.95
Gene sequence:
>810_bases GTGACTGGGCCTGTCGAGGATTCCGCCGTCGCGACCGTGGCTGAGTGGCCCGAAGAATTGGCGGCGGTGCTCACGAATGC GGCCGACGATGCCAGGGCGGCTATTGAGGAGTTCAGCGGTTCTGTGACGGTTGGGGACTACTTAGGAGTCGGTTACGAAG ATCCGAATGCCGCCACTCACCGGTTCTTGGCGCATTTGCCCGGTTACCAGGGATGGCAGTGGGCGGTTGTCGTCGCTGCT TATCCTGGTGCCGAGCACGCCACGGTGAGTGAAGTGGTACTGGTCCCCGGGCCGACGGCGCTGCTCGCGCCAGAGTGGGT GCCGTGGGAACAGCGGGTCAGACCGGGGGATTTGGGCCCGGGGGATCTGCTTGCGCCGACATCGGAGGACTTACGGTTGG TTCCTGGTTACAACGCCAGTGGTGACCCGGCGGTGGACGAGATCGCCGCCGAAATTGGGTTGGGTCGACGCTGGGTAATG AGTGTCTGGGGTCGGTCGGCGGCGGCCGAGCGGTGGCATGGTGGCGATTACGGTCCCGACTCGCCGATGGCGCGGTCCAC CAAGCGTGTGTGCCGCGATTGCGGTTTCTTTCTGTCGCTGGTGGGATCGCTTGGCGCGATGTTCGGGGTATGCGGCAACG AAATGTCCGCCGACGGGCATGTTGTCGACAAGTTGTACGGTTGTGGTGCTCATTCCGACACCCCGGCTCCAGCGGGCAGC GGCTCATCCGTGTATGAGCCGTACGACGACGGTGTCCTCGACATTTTGGAGCCGTCTACAGTGCAGCTTCCAGAGTCCCC GGCGGACTAG
Upstream 100 bases:
>100_bases CTGTCCTATGTCGACTTCATGCGTGTGCAGGAGGCCGGGTGTCGCTTGCAAACTGTGTCTTCCGGCAGAATTGGATTATG GGTTGCAAAGAGGAGGTAGC
Downstream 100 bases:
>100_bases CCTTTTCGACTGGTGGTGCTCAGTCATCGTGGTGGTATGGCGTGGTCGGTCGAATGGGCTGATCCGGTAGCGCGGGGATG TAGGGTTTTTTGACTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTGPVEDSAVATVAEWPEELAAVLTNAADDARAAIEEFSGSVTVGDYLGVGYEDPNAATHRFLAHLPGYQGWQWAVVVAA YPGAEHATVSEVVLVPGPTALLAPEWVPWEQRVRPGDLGPGDLLAPTSEDLRLVPGYNASGDPAVDEIAAEIGLGRRWVM SVWGRSAAAERWHGGDYGPDSPMARSTKRVCRDCGFFLSLVGSLGAMFGVCGNEMSADGHVVDKLYGCGAHSDTPAPAGS GSSVYEPYDDGVLDILEPSTVQLPESPAD
Sequences:
>Translated_269_residues MTGPVEDSAVATVAEWPEELAAVLTNAADDARAAIEEFSGSVTVGDYLGVGYEDPNAATHRFLAHLPGYQGWQWAVVVAA YPGAEHATVSEVVLVPGPTALLAPEWVPWEQRVRPGDLGPGDLLAPTSEDLRLVPGYNASGDPAVDEIAAEIGLGRRWVM SVWGRSAAAERWHGGDYGPDSPMARSTKRVCRDCGFFLSLVGSLGAMFGVCGNEMSADGHVVDKLYGCGAHSDTPAPAGS GSSVYEPYDDGVLDILEPSTVQLPESPAD >Mature_268_residues TGPVEDSAVATVAEWPEELAAVLTNAADDARAAIEEFSGSVTVGDYLGVGYEDPNAATHRFLAHLPGYQGWQWAVVVAAY PGAEHATVSEVVLVPGPTALLAPEWVPWEQRVRPGDLGPGDLLAPTSEDLRLVPGYNASGDPAVDEIAAEIGLGRRWVMS VWGRSAAAERWHGGDYGPDSPMARSTKRVCRDCGFFLSLVGSLGAMFGVCGNEMSADGHVVDKLYGCGAHSDTPAPAGSG SSVYEPYDDGVLDILEPSTVQLPESPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021391 [H]
Pfam domain/function: PF11228 DUF3027 [H]
EC number: NA
Molecular weight: Translated: 28222; Mature: 28091
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPVEDSAVATVAEWPEELAAVLTNAADDARAAIEEFSGSVTVGDYLGVGYEDPNAATH CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHH RFLAHLPGYQGWQWAVVVAAYPGAEHATVSEVVLVPGPTALLAPEWVPWEQRVRPGDLGP HHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCC GDLLAPTSEDLRLVPGYNASGDPAVDEIAAEIGLGRRWVMSVWGRSAAAERWHGGDYGPD CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCCCCCC SPMARSTKRVCRDCGFFLSLVGSLGAMFGVCGNEMSADGHVVDKLYGCGAHSDTPAPAGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC GSSVYEPYDDGVLDILEPSTVQLPESPAD CCCCCCCCCCCEEECCCCCEEECCCCCCC >Mature Secondary Structure TGPVEDSAVATVAEWPEELAAVLTNAADDARAAIEEFSGSVTVGDYLGVGYEDPNAATH CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHH RFLAHLPGYQGWQWAVVVAAYPGAEHATVSEVVLVPGPTALLAPEWVPWEQRVRPGDLGP HHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCC GDLLAPTSEDLRLVPGYNASGDPAVDEIAAEIGLGRRWVMSVWGRSAAAERWHGGDYGPD CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCCCCCC SPMARSTKRVCRDCGFFLSLVGSLGAMFGVCGNEMSADGHVVDKLYGCGAHSDTPAPAGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC GSSVYEPYDDGVLDILEPSTVQLPESPAD CCCCCCCCCCCEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]