| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is galE [C]
Identifier: 221230524
GI number: 221230524
Start: 2327868
End: 2328998
Strand: Direct
Name: galE [C]
Synonym: MLBr_01942
Alternate gene names: 221230524
Gene position: 2327868-2328998 (Clockwise)
Preceding gene: 221230523
Following gene: 221230526
Centisome position: 71.23
GC content: 57.65
Gene sequence:
>1131_bases ATGCTTCGCGGCGTGGGTAACGCATCGTTGACGACCGAGCTCGGACGCGTCTTGGTCACCGGCGGTTCGGGCTTCGTCGG CGCTAATCTGGTGACCGCCTTGCTGGAACGCGGATACCAGGTACGCTCTTTCGACCGCGCCCCGATGCCGCTGCCGCAGC ACCCGCAGCTGGAGGTGCTGCAAGGTGACATCACCGACGCTACGGTCTGCACTACAGCGATGGACAGCATCGATACAGTC TTTCACACCGCGGCAATCATCGAGCTAATGGGCGGCGCTTCGGTGACCGACGAGTATCGGCAGCGCAGCTACACGGTCAA CGTGGGCGGTACCGAAAACTTGCTCCGCGCAGGACAAAAGTCCGGAGTCAAACGGTTCGTCTACACCGCATCCAACAGTG TGGTGATGGGGGGCACTCCCATCACCGGGGGTGATGAAACAATGCCCTATACCAAGCGGTTCAACGACCTGTACACCGAA ACCAAAGTGGTCGCCGAAAAATTCGTACTCTCACAAAACGGCGTACCCGATGGTGAAACCATGCTAACATGTTCGATCAG ACCCAGTGGCATATGGGGTCGCGGCGACCAGACAATGTTCCGTAAGGCATTCGAAAGTGTCGTATCCGGTCACGTCAAGG TACTCATCGGGAGTAAGAACGCCAAACTGGATAACTCCTACGTGCACAACCTGGTGCACGGCTTAATCTTGGCTGCCGAG CACCTGGTCCCAGGCGGCACCGCACCTGGACAAGCCTACTTCATCAACGATGGCGAGCCGATCAACTTCTTCGATTTCAT GGGGCCAATCATCAAGGCGTGTGGTGAAAATTGGCCACGGGTGCGGATCTCCGGTCGGCTGGTGCGCAACGTGATGGCTG TGTGGCAGCGGCTACACTTCGGCTTCGGGCTTCCGAAGCCTCCGATGGAACCGCTTGCGGTAGAACGAGTTTACCTCGAC AACTACTTTTCCATCGAAAAGGCGCACAAAGAGCTGGGCTATCGGCCGCTGTTCACTACCGAACAGGCCATGGCTGAATG TCTACCTTACTACACAGAGTTATTCGAACAAATCAAGGTGGCTGCCAAGCCCCATTTGGCATCCATAGCCGCCACCCCGC GGCCCGAGTAG
Upstream 100 bases:
>100_bases GCCAGCGAGTCGCCGATGTGCTCTCCGCCAGGCAGGTCGAAGAAGCCTAATGCCGATCAAATTAAAGACCGGTTTCCTTT AACTTAAACACGTGTCAGTT
Downstream 100 bases:
>100_bases CGGGCGCACAAGCATTGAAACTGCAAGCTGTGCCAATATTTTCGGGTGGGTGCAACCGTTTAAGTGTAGCGGCAGCTCCG ACGCATGAATGTGTTGCGCT
Product: putative cholesterol dehydrogenase
Products: NA
Alternate protein names: Cholesterol dehydrogenase; 3-beta-hydroxy-Delta(5)-steroid dehydrogenase; 3-beta-HSD; 3BHSD; 3-beta hydroxysterol dehydrogenase; 3-beta-hydroxy-5-ene steroid dehydrogenase; Progesterone reductase; Steroid Delta-isomerase; Delta-5-3-ketosteroid isomerase [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MLRGVGNASLTTELGRVLVTGGSGFVGANLVTALLERGYQVRSFDRAPMPLPQHPQLEVLQGDITDATVCTTAMDSIDTV FHTAAIIELMGGASVTDEYRQRSYTVNVGGTENLLRAGQKSGVKRFVYTASNSVVMGGTPITGGDETMPYTKRFNDLYTE TKVVAEKFVLSQNGVPDGETMLTCSIRPSGIWGRGDQTMFRKAFESVVSGHVKVLIGSKNAKLDNSYVHNLVHGLILAAE HLVPGGTAPGQAYFINDGEPINFFDFMGPIIKACGENWPRVRISGRLVRNVMAVWQRLHFGFGLPKPPMEPLAVERVYLD NYFSIEKAHKELGYRPLFTTEQAMAECLPYYTELFEQIKVAAKPHLASIAATPRPE
Sequences:
>Translated_376_residues MLRGVGNASLTTELGRVLVTGGSGFVGANLVTALLERGYQVRSFDRAPMPLPQHPQLEVLQGDITDATVCTTAMDSIDTV FHTAAIIELMGGASVTDEYRQRSYTVNVGGTENLLRAGQKSGVKRFVYTASNSVVMGGTPITGGDETMPYTKRFNDLYTE TKVVAEKFVLSQNGVPDGETMLTCSIRPSGIWGRGDQTMFRKAFESVVSGHVKVLIGSKNAKLDNSYVHNLVHGLILAAE HLVPGGTAPGQAYFINDGEPINFFDFMGPIIKACGENWPRVRISGRLVRNVMAVWQRLHFGFGLPKPPMEPLAVERVYLD NYFSIEKAHKELGYRPLFTTEQAMAECLPYYTELFEQIKVAAKPHLASIAATPRPE >Mature_376_residues MLRGVGNASLTTELGRVLVTGGSGFVGANLVTALLERGYQVRSFDRAPMPLPQHPQLEVLQGDITDATVCTTAMDSIDTV FHTAAIIELMGGASVTDEYRQRSYTVNVGGTENLLRAGQKSGVKRFVYTASNSVVMGGTPITGGDETMPYTKRFNDLYTE TKVVAEKFVLSQNGVPDGETMLTCSIRPSGIWGRGDQTMFRKAFESVVSGHVKVLIGSKNAKLDNSYVHNLVHGLILAAE HLVPGGTAPGQAYFINDGEPINFFDFMGPIIKACGENWPRVRISGRLVRNVMAVWQRLHFGFGLPKPPMEPLAVERVYLD NYFSIEKAHKELGYRPLFTTEQAMAECLPYYTELFEQIKVAAKPHLASIAATPRPE
Specific function: 3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively [H]
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-beta-HSD family [H]
Homologues:
Organism=Homo sapiens, GI239745448, Length=337, Percent_Identity=34.1246290801187, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI310132178, Length=337, Percent_Identity=34.1246290801187, Blast_Score=178, Evalue=6e-45, Organism=Homo sapiens, GI310113012, Length=337, Percent_Identity=34.1246290801187, Blast_Score=178, Evalue=6e-45, Organism=Homo sapiens, GI116268111, Length=333, Percent_Identity=35.7357357357357, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI193211614, Length=350, Percent_Identity=32.5714285714286, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI8393516, Length=350, Percent_Identity=32.5714285714286, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI260763931, Length=374, Percent_Identity=29.6791443850267, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI4504509, Length=374, Percent_Identity=29.6791443850267, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI19923621, Length=353, Percent_Identity=30.8781869688385, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI4504507, Length=376, Percent_Identity=28.9893617021277, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI218563686, Length=191, Percent_Identity=34.0314136125654, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI218563684, Length=191, Percent_Identity=34.0314136125654, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1786974, Length=294, Percent_Identity=26.530612244898, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17570557, Length=361, Percent_Identity=28.808864265928, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI193211272, Length=347, Percent_Identity=29.3948126801153, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17509709, Length=375, Percent_Identity=28.5333333333333, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321437, Length=351, Percent_Identity=28.2051282051282, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =1.1.1.145; =5.3.3.1 [H]
Molecular weight: Translated: 41164; Mature: 41164
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGVGNASLTTELGRVLVTGGSGFVGANLVTALLERGYQVRSFDRAPMPLPQHPQLEVL CCCCCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEE QGDITDATVCTTAMDSIDTVFHTAAIIELMGGASVTDEYRQRSYTVNVGGTENLLRAGQK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEECCCHHHHHHHHHH SGVKRFVYTASNSVVMGGTPITGGDETMPYTKRFNDLYTETKVVAEKFVLSQNGVPDGET CCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE MLTCSIRPSGIWGRGDQTMFRKAFESVVSGHVKVLIGSKNAKLDNSYVHNLVHGLILAAE EEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH HLVPGGTAPGQAYFINDGEPINFFDFMGPIIKACGENWPRVRISGRLVRNVMAVWQRLHF HHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHH GFGLPKPPMEPLAVERVYLDNYFSIEKAHKELGYRPLFTTEQAMAECLPYYTELFEQIKV CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAKPHLASIAATPRPE HCCCCHHHHCCCCCCC >Mature Secondary Structure MLRGVGNASLTTELGRVLVTGGSGFVGANLVTALLERGYQVRSFDRAPMPLPQHPQLEVL CCCCCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEE QGDITDATVCTTAMDSIDTVFHTAAIIELMGGASVTDEYRQRSYTVNVGGTENLLRAGQK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEECCCHHHHHHHHHH SGVKRFVYTASNSVVMGGTPITGGDETMPYTKRFNDLYTETKVVAEKFVLSQNGVPDGET CCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE MLTCSIRPSGIWGRGDQTMFRKAFESVVSGHVKVLIGSKNAKLDNSYVHNLVHGLILAAE EEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH HLVPGGTAPGQAYFINDGEPINFFDFMGPIIKACGENWPRVRISGRLVRNVMAVWQRLHF HHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHH GFGLPKPPMEPLAVERVYLDNYFSIEKAHKELGYRPLFTTEQAMAECLPYYTELFEQIKV CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAKPHLASIAATPRPE HCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]