| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230444
Identifier: 221230444
GI number: 221230444
Start: 2189446
End: 2190408
Strand: Reverse
Name: 221230444
Synonym: MLBr_01809
Alternate gene names: NA
Gene position: 2190408-2189446 (Counterclockwise)
Preceding gene: 221230445
Following gene: 221230443
Centisome position: 67.02
GC content: 64.17
Gene sequence:
>963_bases GTGATCGATCCAAACCCCGCCGCGAAGCCAGGGGTGTTCCACCCGCCTTCGATGCAGCGCGGGCAGATCGACGACCCGAA GCTGTCGGCGGCGTTGCGGACACTCGAGCTCACAGTCAAACGCAAACTCGACGGAGTCCTGCATGGTGACCACCTCGGCC TGATCTCGGGCCCGGGATCAGAGCCGGGAGAGTCGCGCGTGTATCAGCCTGGCGACGACGTCCGCCGGATGGATTGGGCG GTCACCGCACGCACGACTCACCCGCATGTTCGGCAGATGATCGCTGACCGTGAACTGGAGACCTGGATGGTGATCGACAT GTCGGCTAGCCTGGACTTCGGCACCACCATCTGCGAGAAACGTGACTTGGCTGTGGCGGCGGCTGCTGCGATCACCTTCC TCAACAGTGGTGGCGGAAACCGGCTCGGAGCGCTGATCTGCAATGGCGCGAGAATGACCCGGGTACCGGCACGTTCCGGA CGCCAACATGAGCAGACACTGTTGCGCACCATCGCTACCACGCCTAAAGCGCCGGTCGGGGTACGTGGCGACTTGACGGT TGCCATCGACGCACTACGCCGGCCGGAACGCCGCCGCGGAATGGCCGTCATCATAAGCGATTTCCTGGGCCCGATTAACT GGATGCGCCCGCTGCGCGCGATTGCAGCCCGGCATGAGGTACTCGGTATCGAGGTGCTCGACCCCCGCGATGTAGCACTG CCCGACATTGGCGAGGTTGTCTTGCAGGACGCCGAAACCGGTGTCACCCGAGAGTTCACCATCGATGCAGCGTTGCGTGA CGATTTTGCGAGGGCCGCTGCCGCCCACTGCGCCGATGTCTCCCGCAGCCTGCGCAATTGTGGGGCACCGCTGATGTCGC TGCGCACCGACCGGGACTGGATCGCTGACATAGTCCGTTTCGTCGAATCTCGTCGGCGTGGGGCATTGGCGGGACGCCAG TGA
Upstream 100 bases:
>100_bases GTGTTCTGCAGACAGTTGCCCTGCCACAGGTGAATTCTTTTCCGCAACAAGGCCATTCAGTACCTTCGGTGACGCAGGCC GCGGCCGCGGCCAGCGGTCG
Downstream 100 bases:
>100_bases CTGATGTGGCACACACGCTCGCACCTTTTAAGGCGGGTCGGCTATGACGCTGCCGTTGCTGGGGCCGATGTCGCTGTCCG GTTTCGAACACTCGTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIDPNPAAKPGVFHPPSMQRGQIDDPKLSAALRTLELTVKRKLDGVLHGDHLGLISGPGSEPGESRVYQPGDDVRRMDWA VTARTTHPHVRQMIADRELETWMVIDMSASLDFGTTICEKRDLAVAAAAAITFLNSGGGNRLGALICNGARMTRVPARSG RQHEQTLLRTIATTPKAPVGVRGDLTVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLGIEVLDPRDVAL PDIGEVVLQDAETGVTREFTIDAALRDDFARAAAAHCADVSRSLRNCGAPLMSLRTDRDWIADIVRFVESRRRGALAGRQ
Sequences:
>Translated_320_residues MIDPNPAAKPGVFHPPSMQRGQIDDPKLSAALRTLELTVKRKLDGVLHGDHLGLISGPGSEPGESRVYQPGDDVRRMDWA VTARTTHPHVRQMIADRELETWMVIDMSASLDFGTTICEKRDLAVAAAAAITFLNSGGGNRLGALICNGARMTRVPARSG RQHEQTLLRTIATTPKAPVGVRGDLTVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLGIEVLDPRDVAL PDIGEVVLQDAETGVTREFTIDAALRDDFARAAAAHCADVSRSLRNCGAPLMSLRTDRDWIADIVRFVESRRRGALAGRQ >Mature_320_residues MIDPNPAAKPGVFHPPSMQRGQIDDPKLSAALRTLELTVKRKLDGVLHGDHLGLISGPGSEPGESRVYQPGDDVRRMDWA VTARTTHPHVRQMIADRELETWMVIDMSASLDFGTTICEKRDLAVAAAAAITFLNSGGGNRLGALICNGARMTRVPARSG RQHEQTLLRTIATTPKAPVGVRGDLTVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLGIEVLDPRDVAL PDIGEVVLQDAETGVTREFTIDAALRDDFARAAAAHCADVSRSLRNCGAPLMSLRTDRDWIADIVRFVESRRRGALAGRQ
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 34945; Mature: 34945
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPNPAAKPGVFHPPSMQRGQIDDPKLSAALRTLELTVKRKLDGVLHGDHLGLISGPGS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCC EPGESRVYQPGDDVRRMDWAVTARTTHPHVRQMIADRELETWMVIDMSASLDFGTTICEK CCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH RDLAVAAAAAITFLNSGGGNRLGALICNGARMTRVPARSGRQHEQTLLRTIATTPKAPVG CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC VRGDLTVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLGIEVLDPRDVAL CCCCHHHHHHHHHCCHHHCCCEEEHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCC PDIGEVVLQDAETGVTREFTIDAALRDDFARAAAAHCADVSRSLRNCGAPLMSLRTDRDW CCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH IADIVRFVESRRRGALAGRQ HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIDPNPAAKPGVFHPPSMQRGQIDDPKLSAALRTLELTVKRKLDGVLHGDHLGLISGPGS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCC EPGESRVYQPGDDVRRMDWAVTARTTHPHVRQMIADRELETWMVIDMSASLDFGTTICEK CCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH RDLAVAAAAAITFLNSGGGNRLGALICNGARMTRVPARSGRQHEQTLLRTIATTPKAPVG CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC VRGDLTVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIAARHEVLGIEVLDPRDVAL CCCCHHHHHHHHHCCHHHCCCEEEHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCCC PDIGEVVLQDAETGVTREFTIDAALRDDFARAAAAHCADVSRSLRNCGAPLMSLRTDRDW CCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH IADIVRFVESRRRGALAGRQ HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]