| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is yfbK [C]
Identifier: 221230443
GI number: 221230443
Start: 2188395
End: 2189402
Strand: Reverse
Name: yfbK [C]
Synonym: MLBr_01808
Alternate gene names: 221230443
Gene position: 2189402-2188395 (Counterclockwise)
Preceding gene: 221230444
Following gene: 221230442
Centisome position: 66.99
GC content: 60.81
Gene sequence:
>1008_bases ATGACGCTGCCGTTGCTGGGGCCGATGTCGCTGTCCGGTTTCGAACACTCGTGGTTTTTTCTGTTCATCTTTATCGTTTT TGGGCTAGCCGCGTTCTACGTCATGATGCAGGTGGCGCGCCAGCGACGCATGCTGCGGTTTGCCAACATGGAGTTGCTGG AAAGCGTAGCTCCCAACCGACCTGTTCAATGGCGCCACGTGCCCGCGATTCTGCTGATGTTGGCGTTGTTGCTGTTCACC ATTGCGATGGCGGGGCCGACGAACGACGTTCGGATTCCGCGTAACCGCGCGGTGGTCATGCTGGTTATCGACGTATCGCA GTCGATGCGTGCTACCGATGTCGAACCCAATCGGATGGCTGCGGCGCAAGAGGCTGCAAAACAGTTTGCCGGCGAGCTGA CTCCAGGCATCAACCTTGGCCTGATCGCCTACGCGGGCACGGCAACGGTGCTGGTGTCACCAACCACCAATCGGTACGCC ACCAAGAACGCGCTCGACAAATTGCAGTTTGCCGACCGTACCGCCACTGGAGAGGCCATCTTTACCGCGCTGCAGGCCAT CGCCACCGTAGGTGCGGTGATAGGCGGCGGTGAAATGCCACCACCGGCGCGTATCGTGTTGTTCTCTGACGGCAAGGAGA CGATGCCGACCAACCCGGACAACCCCAAGGGCGCTTATACTGCTGCGCGCACCGCCAAGGACCAGGGCGTGCCGATCTCA ACGATCTCGTTTGGCACCGTGTACGGCTTCGTTGAGATCAACGGTCAGCGTCAGCCGGTGCCCGTCGACGACGAGACGAT GAAGAAGGTCGCCCAGCTCTCCGGTGGTAACTCGTACAATGCGGCGACCTTAGCGGAACTAAAAGCCGTTTATGCGTCAC TGCAGCAGCAGATCGGCTACGAGACCATCAAGGGTGACGCCAGCGCTGGCTGGCTGCGGCTGGGTGTGCTGGTGCTTGCG CTGGCTGCGCTGACGGCGCTGCTGATCAACCGCCGGCTGCCGACCTAG
Upstream 100 bases:
>100_bases GACATAGTCCGTTTCGTCGAATCTCGTCGGCGTGGGGCATTGGCGGGACGCCAGTGACTGATGTGGCACACACGCTCGCA CCTTTTAAGGCGGGTCGGCT
Downstream 100 bases:
>100_bases TTTTGTTACAGTTGCGTCAGAGTCAGACCGGCCGGTGTTGGGTCGGCCGCGGTGAGGCGATAGGTTGGCGGGGTGACTGA CGCCGCTGCCAAGGTCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTLPLLGPMSLSGFEHSWFFLFIFIVFGLAAFYVMMQVARQRRMLRFANMELLESVAPNRPVQWRHVPAILLMLALLLFT IAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVEPNRMAAAQEAAKQFAGELTPGINLGLIAYAGTATVLVSPTTNRYA TKNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGEMPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS TISFGTVYGFVEINGQRQPVPVDDETMKKVAQLSGGNSYNAATLAELKAVYASLQQQIGYETIKGDASAGWLRLGVLVLA LAALTALLINRRLPT
Sequences:
>Translated_335_residues MTLPLLGPMSLSGFEHSWFFLFIFIVFGLAAFYVMMQVARQRRMLRFANMELLESVAPNRPVQWRHVPAILLMLALLLFT IAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVEPNRMAAAQEAAKQFAGELTPGINLGLIAYAGTATVLVSPTTNRYA TKNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGEMPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS TISFGTVYGFVEINGQRQPVPVDDETMKKVAQLSGGNSYNAATLAELKAVYASLQQQIGYETIKGDASAGWLRLGVLVLA LAALTALLINRRLPT >Mature_334_residues TLPLLGPMSLSGFEHSWFFLFIFIVFGLAAFYVMMQVARQRRMLRFANMELLESVAPNRPVQWRHVPAILLMLALLLFTI AMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVEPNRMAAAQEAAKQFAGELTPGINLGLIAYAGTATVLVSPTTNRYAT KNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGEMPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIST ISFGTVYGFVEINGQRQPVPVDDETMKKVAQLSGGNSYNAATLAELKAVYASLQQQIGYETIKGDASAGWLRLGVLVLAL AALTALLINRRLPT
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1808_MYCLB (B8ZS82)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002503859.1 - ProteinModelPortal: B8ZS82 - EnsemblBacteria: EBMYCT00000087335 - GeneID: 7325233 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000017035 - HOGENOM: HBG480772 - OMA: IGFEGWS - ProtClustDB: PRK13685 - HAMAP: MF_01340 - InterPro: IPR022933 - InterPro: IPR002035 - SMART: SM00327
Pfam domain/function: PF00092 VWA
EC number: NA
Molecular weight: Translated: 36101; Mature: 35969
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2a2684e8)-; HASH(0x2a55c9e0)-; HASH(0x2a389ac0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLLGPMSLSGFEHSWFFLFIFIVFGLAAFYVMMQVARQRRMLRFANMELLESVAPNR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVQWRHVPAILLMLALLLFTIAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVEPNRMA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH AAQEAAKQFAGELTPGINLGLIAYAGTATVLVSPTTNRYATKNALDKLQFADRTATGEAI HHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH FTALQAIATVGAVIGGGEMPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE TISFGTVYGFVEINGQRQPVPVDDETMKKVAQLSGGNSYNAATLAELKAVYASLQQQIGY EEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ETIKGDASAGWLRLGVLVLALAALTALLINRRLPT HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure TLPLLGPMSLSGFEHSWFFLFIFIVFGLAAFYVMMQVARQRRMLRFANMELLESVAPNR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVQWRHVPAILLMLALLLFTIAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVEPNRMA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH AAQEAAKQFAGELTPGINLGLIAYAGTATVLVSPTTNRYATKNALDKLQFADRTATGEAI HHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH FTALQAIATVGAVIGGGEMPPPARIVLFSDGKETMPTNPDNPKGAYTAARTAKDQGVPIS HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE TISFGTVYGFVEINGQRQPVPVDDETMKKVAQLSGGNSYNAATLAELKAVYASLQQQIGY EEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ETIKGDASAGWLRLGVLVLALAALTALLINRRLPT HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA