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The map label for this gene is ygdL [C]

Identifier: 221230414

GI number: 221230414

Start: 2116937

End: 2119102

Strand: Reverse

Name: ygdL [C]

Synonym: MLBr_01751

Alternate gene names: 221230414

Gene position: 2119102-2116937 (Counterclockwise)

Preceding gene: 221230415

Following gene: 221230413

Centisome position: 64.84

GC content: 60.71

Gene sequence:

>2166_bases
TTGGCGTATGGGTGCAACCCAAGGGGAGCCGCAAGGGTGAGTGATGAGCGTGATGTGAGCCCGTACGCTCGGGTTCTGGC
CCTTGACGACCCCGCTGATGCTGCGGTGCTGCAGCGGCTGCGGGCTGATTCCAAGGTTGACTTTGTCGACCATCATGAGC
GACAGCTGCAGGAATTGCTTAGCTTGCTGCCCACGCCCGATCCGCAGTTGATCGCCGAACCGTGTAGGTGGGTGTACTAC
CCATGGCGGCATGTGGTCGTATCGATGCTGGGTCCGCGCGGGTTTCGGGCGGTACGGTTGGACCGCAACCGCAACGAGAT
CACCGCCGAGGAGCAAGTTGCGTTGGGCAGACTACACATCGGCGTCGCTGGGCTAAGTGTGGGACATGTGATCGCCCACA
CGTTGGCCGCCCAGGGCCTGTGCGGACAACTGCGCTTGGCCGATTTCGATCGCCTCGAACTATCCAACCTCAACCGAGTT
CCTGCCACGGTGTTCGATCTTGGGCTCAATAAGGCTGAGGTAGCTGCGCGCCGCATCGCTGAACTGGACCCGTATCTGAC
AGTGCGAGTGTTTGACAATGGTTTGACGTTCGACACCGTTGATCAGTTCTTGGAGGGCCTCGATGTCGTGGTGGAGCAGT
GCGATTCGCTGGACATAAAGGCTCTCCTGCGAGAGGGAGCCCGCAGCCACGGTATTCCGGTACTGATGGCGACCAGTGAC
CGCGGCCTGATTGATGTTGAGCGGTTCGACTTGGAGCCGCGGCGTTCGATTCTGCACGGTCTGCTAGGTGAGCTTGATAT
CCGGTTGCTTCCAGAGATGAGCAACCGCGAGAAAATTCCGTATATTTTGCGCTTTCTGGAGGCCGAACGGTTGTCGCCGC
GCACTGCGACGACGTTGGTCGAGATCGATCGCTCGCTGTCGACCTGGCCCCAGTTGGCAGGGGACGTGGCGCTGGGAGCT
ACTGCGGTGGCCGAGGCGGTACGCCGAATCGGTCTCGGGGAGGAGTTGCGCTCGGGGCGAGCGCGTATTGACGTCGCCTC
GGCGCTCAATCAGCTCACCGAGCCGGACATGGCCCGACATCGTCCCGCGAATCCGACGCAGTGTTCAGAACTCGCACTGT
CCGGTATTGAGGGGGTTATTGCCACTGCTGCGATCCGCGCACCGTCGGGTGGAAACCTACAGCCCTGGCACATCGACGCC
GGGCCTGATGCCTTGGTGATTCGAATTGCTCCAGAACATACTGACAGCCTCGACGTCGGCTTCCGCGGCAGCGCCGTTGC
GGTGGGTGCAGCGTTGTTCAACGCTAGGGTTGCGGCTGCTGCCCATGGTGTGCTCGGGCCGGTAAGCCTGGCTGAAAATG
TTGACGGTGCGCCGCTGCGGGTCACCTTAAGTTTAGGTGATGGGTGGAACCCCGACTTAGCAGCAGTTTATGAGCCGATG
CTGGTCCGCGAAACTAATCGCAATCATGGCAAGCCAACAATGGTTCTGACCGAGACGATTGATGTGTTGCACGCGGCCGC
GGTGGCCGAAGGTGCACGGCTGCACCTGCTAACTGCGCGAGATGACATCGTCCGAGCTGCAACCATTCTGGCTGCTGCCG
ACCGGTCGAGGTATCTTACGCCACGGCTTCACGAGGAGATGATCTCGGAGCTGCGTTGGCCGGGAGATTCGTTTCCAGAC
ACTGGTATTGATGTGCGTAGCCTCGAAATGGATTGGCATCAGTTGGCTGCGTTCGACGTGCTTCGTCGTACGGACGTTAT
GGAACTCCTTGCGCAGTGGAACGTCGGCGCCGCGCTGGGTCAAGACACCCATGATCGTGTGGTGGCCAGTTCGGCGCTTG
CCGTGATCTCGGTGCCCGGGCACGCGTTGGCGGACTACGCTCGTGGTGGATCGGCTGTCGAGGCGATATGGGTCGCTGCG
CAGCGGTATGGGTTCGCAGTACAGCCGATTTCGCCCGTGTTCCTCTACGCTCACAGTGTCGACGAGCTACACGCATTATC
TGCACAGTTCGCCGATGAATTGGGTCAACTGGGCAAAGACTTCCGCAGTCTGGCGCGTATCCCGGCCGATAACTCCCTCG
TGTTGGTGTTGCGATTGACTGTCGCGGGGCCTGCGTCGGTGCGGAGCCGCCGAAGTTTTGAACGCATCCGGTTGCTGTCG
GGCTAA

Upstream 100 bases:

>100_bases
TTTACTGTGGTTGTCGACGGCTCGATTTGGACCTGCAACCTTCCAGCTGAGCCGTCGATTGGAGGCCAGATGATCGAAAC
TGGCACCCGGCTACGTCGGC

Downstream 100 bases:

>100_bases
GCGGTTATGGTAAGACCATGACCCGGTCCCTGGACGAACTCGTCACTAGGGTGGCCTCGAAGTTAATGGCTGCAACAGCG
GCCACCGCGGTCACGATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 721; Mature: 720

Protein sequence:

>721_residues
MAYGCNPRGAARVSDERDVSPYARVLALDDPADAAVLQRLRADSKVDFVDHHERQLQELLSLLPTPDPQLIAEPCRWVYY
PWRHVVVSMLGPRGFRAVRLDRNRNEITAEEQVALGRLHIGVAGLSVGHVIAHTLAAQGLCGQLRLADFDRLELSNLNRV
PATVFDLGLNKAEVAARRIAELDPYLTVRVFDNGLTFDTVDQFLEGLDVVVEQCDSLDIKALLREGARSHGIPVLMATSD
RGLIDVERFDLEPRRSILHGLLGELDIRLLPEMSNREKIPYILRFLEAERLSPRTATTLVEIDRSLSTWPQLAGDVALGA
TAVAEAVRRIGLGEELRSGRARIDVASALNQLTEPDMARHRPANPTQCSELALSGIEGVIATAAIRAPSGGNLQPWHIDA
GPDALVIRIAPEHTDSLDVGFRGSAVAVGAALFNARVAAAAHGVLGPVSLAENVDGAPLRVTLSLGDGWNPDLAAVYEPM
LVRETNRNHGKPTMVLTETIDVLHAAAVAEGARLHLLTARDDIVRAATILAAADRSRYLTPRLHEEMISELRWPGDSFPD
TGIDVRSLEMDWHQLAAFDVLRRTDVMELLAQWNVGAALGQDTHDRVVASSALAVISVPGHALADYARGGSAVEAIWVAA
QRYGFAVQPISPVFLYAHSVDELHALSAQFADELGQLGKDFRSLARIPADNSLVLVLRLTVAGPASVRSRRSFERIRLLS
G

Sequences:

>Translated_721_residues
MAYGCNPRGAARVSDERDVSPYARVLALDDPADAAVLQRLRADSKVDFVDHHERQLQELLSLLPTPDPQLIAEPCRWVYY
PWRHVVVSMLGPRGFRAVRLDRNRNEITAEEQVALGRLHIGVAGLSVGHVIAHTLAAQGLCGQLRLADFDRLELSNLNRV
PATVFDLGLNKAEVAARRIAELDPYLTVRVFDNGLTFDTVDQFLEGLDVVVEQCDSLDIKALLREGARSHGIPVLMATSD
RGLIDVERFDLEPRRSILHGLLGELDIRLLPEMSNREKIPYILRFLEAERLSPRTATTLVEIDRSLSTWPQLAGDVALGA
TAVAEAVRRIGLGEELRSGRARIDVASALNQLTEPDMARHRPANPTQCSELALSGIEGVIATAAIRAPSGGNLQPWHIDA
GPDALVIRIAPEHTDSLDVGFRGSAVAVGAALFNARVAAAAHGVLGPVSLAENVDGAPLRVTLSLGDGWNPDLAAVYEPM
LVRETNRNHGKPTMVLTETIDVLHAAAVAEGARLHLLTARDDIVRAATILAAADRSRYLTPRLHEEMISELRWPGDSFPD
TGIDVRSLEMDWHQLAAFDVLRRTDVMELLAQWNVGAALGQDTHDRVVASSALAVISVPGHALADYARGGSAVEAIWVAA
QRYGFAVQPISPVFLYAHSVDELHALSAQFADELGQLGKDFRSLARIPADNSLVLVLRLTVAGPASVRSRRSFERIRLLS
G
>Mature_720_residues
AYGCNPRGAARVSDERDVSPYARVLALDDPADAAVLQRLRADSKVDFVDHHERQLQELLSLLPTPDPQLIAEPCRWVYYP
WRHVVVSMLGPRGFRAVRLDRNRNEITAEEQVALGRLHIGVAGLSVGHVIAHTLAAQGLCGQLRLADFDRLELSNLNRVP
ATVFDLGLNKAEVAARRIAELDPYLTVRVFDNGLTFDTVDQFLEGLDVVVEQCDSLDIKALLREGARSHGIPVLMATSDR
GLIDVERFDLEPRRSILHGLLGELDIRLLPEMSNREKIPYILRFLEAERLSPRTATTLVEIDRSLSTWPQLAGDVALGAT
AVAEAVRRIGLGEELRSGRARIDVASALNQLTEPDMARHRPANPTQCSELALSGIEGVIATAAIRAPSGGNLQPWHIDAG
PDALVIRIAPEHTDSLDVGFRGSAVAVGAALFNARVAAAAHGVLGPVSLAENVDGAPLRVTLSLGDGWNPDLAAVYEPML
VRETNRNHGKPTMVLTETIDVLHAAAVAEGARLHLLTARDDIVRAATILAAADRSRYLTPRLHEEMISELRWPGDSFPDT
GIDVRSLEMDWHQLAAFDVLRRTDVMELLAQWNVGAALGQDTHDRVVASSALAVISVPGHALADYARGGSAVEAIWVAAQ
RYGFAVQPISPVFLYAHSVDELHALSAQFADELGQLGKDFRSLARIPADNSLVLVLRLTVAGPASVRSRRSFERIRLLSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789177, Length=130, Percent_Identity=36.9230769230769, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 78450; Mature: 78319

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYGCNPRGAARVSDERDVSPYARVLALDDPADAAVLQRLRADSKVDFVDHHERQLQELL
CCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SLLPTPDPQLIAEPCRWVYYPWRHVVVSMLGPRGFRAVRLDRNRNEITAEEQVALGRLHI
HHCCCCCHHHHHCCHHHEECCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHEE
GVAGLSVGHVIAHTLAAQGLCGQLRLADFDRLELSNLNRVPATVFDLGLNKAEVAARRIA
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCHHHHHHHHHH
ELDPYLTVRVFDNGLTFDTVDQFLEGLDVVVEQCDSLDIKALLREGARSHGIPVLMATSD
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCEEEEEECC
RGLIDVERFDLEPRRSILHGLLGELDIRLLPEMSNREKIPYILRFLEAERLSPRTATTLV
CCEEEHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
EIDRSLSTWPQLAGDVALGATAVAEAVRRIGLGEELRSGRARIDVASALNQLTEPDMARH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEHHHHHHHHCCCCHHHHC
RPANPTQCSELALSGIEGVIATAAIRAPSGGNLQPWHIDAGPDALVIRIAPEHTDSLDVG
CCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCC
FRGSAVAVGAALFNARVAAAAHGVLGPVSLAENVDGAPLRVTLSLGDGWNPDLAAVYEPM
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHCCH
LVRETNRNHGKPTMVLTETIDVLHAAAVAEGARLHLLTARDDIVRAATILAAADRSRYLT
HEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCC
PRLHEEMISELRWPGDSFPDTGIDVRSLEMDWHQLAAFDVLRRTDVMELLAQWNVGAALG
HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCC
QDTHDRVVASSALAVISVPGHALADYARGGSAVEAIWVAAQRYGFAVQPISPVFLYAHSV
CCHHHHHHHHCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCEEEEECCH
DELHALSAQFADELGQLGKDFRSLARIPADNSLVLVLRLTVAGPASVRSRRSFERIRLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure 
AYGCNPRGAARVSDERDVSPYARVLALDDPADAAVLQRLRADSKVDFVDHHERQLQELL
CCCCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SLLPTPDPQLIAEPCRWVYYPWRHVVVSMLGPRGFRAVRLDRNRNEITAEEQVALGRLHI
HHCCCCCHHHHHCCHHHEECCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHEE
GVAGLSVGHVIAHTLAAQGLCGQLRLADFDRLELSNLNRVPATVFDLGLNKAEVAARRIA
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCHHHHHHHHHH
ELDPYLTVRVFDNGLTFDTVDQFLEGLDVVVEQCDSLDIKALLREGARSHGIPVLMATSD
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCEEEEEECC
RGLIDVERFDLEPRRSILHGLLGELDIRLLPEMSNREKIPYILRFLEAERLSPRTATTLV
CCEEEHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
EIDRSLSTWPQLAGDVALGATAVAEAVRRIGLGEELRSGRARIDVASALNQLTEPDMARH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEHHHHHHHHCCCCHHHHC
RPANPTQCSELALSGIEGVIATAAIRAPSGGNLQPWHIDAGPDALVIRIAPEHTDSLDVG
CCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCC
FRGSAVAVGAALFNARVAAAAHGVLGPVSLAENVDGAPLRVTLSLGDGWNPDLAAVYEPM
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHCCH
LVRETNRNHGKPTMVLTETIDVLHAAAVAEGARLHLLTARDDIVRAATILAAADRSRYLT
HEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCC
PRLHEEMISELRWPGDSFPDTGIDVRSLEMDWHQLAAFDVLRRTDVMELLAQWNVGAALG
HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCC
QDTHDRVVASSALAVISVPGHALADYARGGSAVEAIWVAAQRYGFAVQPISPVFLYAHSV
CCHHHHHHHHCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCEEEEECCH
DELHALSAQFADELGQLGKDFRSLARIPADNSLVLVLRLTVAGPASVRSRRSFERIRLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]