Click here to switch to the map view.

The map label for this gene is 221230344

Identifier: 221230344

GI number: 221230344

Start: 1978887

End: 1979699

Strand: Direct

Name: 221230344

Synonym: MLBr_01644

Alternate gene names: NA

Gene position: 1978887-1979699 (Clockwise)

Preceding gene: 221230340

Following gene: 221230346

Centisome position: 60.55

GC content: 57.44

Gene sequence:

>813_bases
ATGCGCCATTTGGCGTTATTATTGCGGCCAGGCTGGATCGCACTGACCTTAGTGGTTACCGCGTTCACCTACTTGTGTTT
TATGGTGCTCGCACCCTGGCAGTTGGGCAAGAACACCAGGATGTCACGGGAAAACAACCAGATCGAATATTCCCTCAACA
CGCCGCCGGTGCCGGTGAAAACCTTACTATCGCACCAGGATTTGTCGACATCGAAATCTCAGTGGCGCCAGGTTACGGCG
ACCGGGCGCTATCTGCCGGACGTCCAGGTGCTGGCCCGGTTGCGAGTGGTTGATTCAGGCCAGGCTTTCGAGGTGCTAGC
ACCATTCGTCGTTGACGATGGACCGACCGTCCTGGTTGATCGCGGTTACGTGCGTCCCGAACCAGGATCGCACGTGCCGC
CAATCCCCCGCCCTCCCAACGAGGCCGTAAGTATCACAGCTCGGCTGCGCGACTCCGAACCGGTCATGAAAGACAAAGAA
CCGTTCTCCAGGGACGGCGTCCAGCAGGTGTATTCGATTAACATCGAACAGGTCGCAAGGTTGACAAAGATCCCGTTGGC
CGGGTCCTATCTGCAGTTGGTCGATAACCAACCCGGCGGACTCGGTGTGATCGACATACCGCATCTCGACGCTGGGCCGT
TTCTGTCCTATGGCATCCAATGGATCTCGTTTGGCATTATCGCGCCAATTGGATTGGGCTATTTAGCCTACGCAGAGATC
CGCACCCACCGTCAGGAGAAGCTAGCGAAACCGTCACAGGCTCCGATGGCCGTCGAGGAAAAACTCGCAGACCGCTACGG
CCACCCACGGTAA

Upstream 100 bases:

>100_bases
ACCACGATGACTTCGAAGAGGTTTTCGCCGTCATCGAGACCGCCTTGCCGGGCCTGCATGATTGGCTCGATGAGCGACTC
GCGCAGAACGGACACAGTTA

Downstream 100 bases:

>100_bases
ATCGACAGCCCAATTAGTAGAGCGACCTCCGCCTGAACCGCCCGCGACAGCATCACCGCGCGACGCAAATCAGCGACATC
TGCCTACGGGCCGTCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRHLALLLRPGWIALTLVVTAFTYLCFMVLAPWQLGKNTRMSRENNQIEYSLNTPPVPVKTLLSHQDLSTSKSQWRQVTA
TGRYLPDVQVLARLRVVDSGQAFEVLAPFVVDDGPTVLVDRGYVRPEPGSHVPPIPRPPNEAVSITARLRDSEPVMKDKE
PFSRDGVQQVYSINIEQVARLTKIPLAGSYLQLVDNQPGGLGVIDIPHLDAGPFLSYGIQWISFGIIAPIGLGYLAYAEI
RTHRQEKLAKPSQAPMAVEEKLADRYGHPR

Sequences:

>Translated_270_residues
MRHLALLLRPGWIALTLVVTAFTYLCFMVLAPWQLGKNTRMSRENNQIEYSLNTPPVPVKTLLSHQDLSTSKSQWRQVTA
TGRYLPDVQVLARLRVVDSGQAFEVLAPFVVDDGPTVLVDRGYVRPEPGSHVPPIPRPPNEAVSITARLRDSEPVMKDKE
PFSRDGVQQVYSINIEQVARLTKIPLAGSYLQLVDNQPGGLGVIDIPHLDAGPFLSYGIQWISFGIIAPIGLGYLAYAEI
RTHRQEKLAKPSQAPMAVEEKLADRYGHPR
>Mature_270_residues
MRHLALLLRPGWIALTLVVTAFTYLCFMVLAPWQLGKNTRMSRENNQIEYSLNTPPVPVKTLLSHQDLSTSKSQWRQVTA
TGRYLPDVQVLARLRVVDSGQAFEVLAPFVVDDGPTVLVDRGYVRPEPGSHVPPIPRPPNEAVSITARLRDSEPVMKDKE
PFSRDGVQQVYSINIEQVARLTKIPLAGSYLQLVDNQPGGLGVIDIPHLDAGPFLSYGIQWISFGIIAPIGLGYLAYAEI
RTHRQEKLAKPSQAPMAVEEKLADRYGHPR

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 30049; Mature: 30049

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLALLLRPGWIALTLVVTAFTYLCFMVLAPWQLGKNTRMSRENNQIEYSLNTPPVPVK
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECCCCCCCHH
TLLSHQDLSTSKSQWRQVTATGRYLPDVQVLARLRVVDSGQAFEVLAPFVVDDGPTVLVD
HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHEECCCEEECCCCEEEEE
RGYVRPEPGSHVPPIPRPPNEAVSITARLRDSEPVMKDKEPFSRDGVQQVYSINIEQVAR
CCEECCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH
LTKIPLAGSYLQLVDNQPGGLGVIDIPHLDAGPFLSYGIQWISFGIIAPIGLGYLAYAEI
HHHCCCCCHHHHEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTHRQEKLAKPSQAPMAVEEKLADRYGHPR
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRHLALLLRPGWIALTLVVTAFTYLCFMVLAPWQLGKNTRMSRENNQIEYSLNTPPVPVK
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECCCCCCCHH
TLLSHQDLSTSKSQWRQVTATGRYLPDVQVLARLRVVDSGQAFEVLAPFVVDDGPTVLVD
HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHEECCCEEECCCCEEEEE
RGYVRPEPGSHVPPIPRPPNEAVSITARLRDSEPVMKDKEPFSRDGVQQVYSINIEQVAR
CCEECCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH
LTKIPLAGSYLQLVDNQPGGLGVIDIPHLDAGPFLSYGIQWISFGIIAPIGLGYLAYAEI
HHHCCCCCHHHHEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTHRQEKLAKPSQAPMAVEEKLADRYGHPR
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]