Click here to switch to the map view.

The map label for this gene is 221230329

Identifier: 221230329

GI number: 221230329

Start: 1939922

End: 1940164

Strand: Reverse

Name: 221230329

Synonym: MLBr_01617

Alternate gene names: NA

Gene position: 1940164-1939922 (Counterclockwise)

Preceding gene: 221230330

Following gene: 221230328

Centisome position: 59.37

GC content: 60.91

Gene sequence:

>243_bases
ATGAGTACGGTCGTCGTTGACGCTGTCGAGCATGTGGTCCGCGGGATTGTCGATAATCCGGACGATGTCCGGGTGGACCT
GGTCATCAGTCGGCGTGGGCGCACTGTCGAAGTGCATGTTCATCCCGACGATCTGGGTAAGGTGATCGGTCGTGGAGGAC
GTACTGCAACCGCGTTGCGCAAGTTGGTCGCCGGCATCGGTGGCCGCGGTATCCGCGTCGATGTGGTAGACACCGACCAG
TAG

Upstream 100 bases:

>100_bases
TGTAGAATCCGACGCTGAGGGCGCCAAAGCCACGAAAGCGTATGCGCTGGCCGAGGGCGACGAGCAGTCCGAGTAAACGA
GCGAAAGCTGACTAAATGCA

Downstream 100 bases:

>100_bases
CTGAGTGCATGCTCATGGTGCTTTGTTGGAGTTGACAATCGGGCGGGTGGTGAAAGCGCACGGTATCGGTGGGGAAGTGG
TCGTTGAGATTCGTACCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSTVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATALRKLVAGIGGRGIRVDVVDTDQ

Sequences:

>Translated_80_residues
MSTVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATALRKLVAGIGGRGIRVDVVDTDQ
>Mature_79_residues
STVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATALRKLVAGIGGRGIRVDVVDTDQ

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1617_MYCLE (O33015)

Other databases:

- EMBL:   Z97369
- EMBL:   AL583922
- PIR:   C87111
- RefSeq:   NP_302115.1
- ProteinModelPortal:   O33015
- EnsemblBacteria:   EBMYCT00000028945
- GeneID:   909822
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML1617
- NMPDR:   fig|272631.1.peg.987
- Leproma:   ML1617
- GeneTree:   EBGT00050000016610
- HOGENOM:   HBG668070
- OMA:   EHLVKGI
- ProtClustDB:   PRK02821
- BioCyc:   MLEP272631:ML1617-MONOMER
- HAMAP:   MF_00088
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627
- Gene3D:   G3DSA:3.30.300.20

Pfam domain/function: PF00013 KH_1; SSF54814 KH_prok

EC number: NA

Molecular weight: Translated: 8562; Mature: 8431

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATALR
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHCCCCCHHHHHH
KLVAGIGGRGIRVDVVDTDQ
HHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure 
STVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATALR
CCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHCCCCCHHHHHH
KLVAGIGGRGIRVDVVDTDQ
HHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002