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The map label for this gene is cdh

Identifier: 221230221

GI number: 221230221

Start: 1699581

End: 1700387

Strand: Direct

Name: cdh

Synonym: MLBr_01417

Alternate gene names: 221230221

Gene position: 1699581-1700387 (Clockwise)

Preceding gene: 221230220

Following gene: 221230224

Centisome position: 52.01

GC content: 53.78

Gene sequence:

>807_bases
TTGCGTCGAAGTATCATCTTAGTGTCTGTGTCTGTGGCCATAGCGATGCTGACCGGCGCGTCAATTGCTGAGGCCGAGCC
GATGCCGCCGAATAACCCGTCTGCAGCCACTCGCGATGCACTGTGGAAAATTGTGCACGACCGTTGCGAACTCGGCTATC
AACATACCGGTGCTTACGCTCCTTGCACACTGGTCGATGAACAGGCCGGAACGGCTTTGTTTAAAGCAAATTATGATCCG
AACCAGTACCTCTTACTCCCGCTTGCTCGTGTCACGGGCATTGAGGATCCTGCCTTGCAGGAGCTCGCGAGCCCCAACTA
CCTTTACAACGCTTGGGCCGCTCGAGGCTTCGTCAGTTCGCGCCTAAATAACTCACTTCCAGAGCCTGACATCTTCCTTG
CAATCAATCCGAAGAACGCACGTACACAGGATCAGCTGCATATCCACATATCATGTGTGTCACCGACGACAGCGGAGATC
CTTAAGCAGGTTAATTGGGCTGAATACGTTGGCTGGAAGCCACTCCCCGTCACTTTACAAGATCACACTTACCAAGCACT
AGCGGTTAACAGAAGTACGTTCGAGTCCAAGAGTCTGTTCCGGGACATCCAGACGAAGGTAACTGCTGACGGCAATACAA
TGGATCACGCTTCGGTTGCGGTTGCAAACATTGCACCGGACCAGTTCTTGCTGCTCGTGGCCGAGGGAACTGAAGACCAG
GCTATCGCAGCCGAAGAGCTCCAGGACCACAACTGTTCCATCGCCAAGCGGCTAACAGGACAGTTAGACATGGAGACCCG
GAGGTAG

Upstream 100 bases:

>100_bases
GCGACACAACGTAATGACACGAGCGACCCGCACTGCGTTCGGCGCCTGTTGGTCACCGATAAAAGCTGCCAGCACCAAGC
TAGCGAGCAGCAGTTGGCTA

Downstream 100 bases:

>100_bases
AGTACACGCAGTCCTCTTCACATAGCAAAAGACCATGACCTGGGGAAGAAAATCCTTCCCGCTGTTGATAAGCCAGGCCG
CGAACACCACCAGAACACCA

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRRSIILVSVSVAIAMLTGASIAEAEPMPPNNPSAATRDALWKIVHDRCELGYQHTGAYAPCTLVDEQAGTALFKANYDP
NQYLLLPLARVTGIEDPALQELASPNYLYNAWAARGFVSSRLNNSLPEPDIFLAINPKNARTQDQLHIHISCVSPTTAEI
LKQVNWAEYVGWKPLPVTLQDHTYQALAVNRSTFESKSLFRDIQTKVTADGNTMDHASVAVANIAPDQFLLLVAEGTEDQ
AIAAEELQDHNCSIAKRLTGQLDMETRR

Sequences:

>Translated_268_residues
MRRSIILVSVSVAIAMLTGASIAEAEPMPPNNPSAATRDALWKIVHDRCELGYQHTGAYAPCTLVDEQAGTALFKANYDP
NQYLLLPLARVTGIEDPALQELASPNYLYNAWAARGFVSSRLNNSLPEPDIFLAINPKNARTQDQLHIHISCVSPTTAEI
LKQVNWAEYVGWKPLPVTLQDHTYQALAVNRSTFESKSLFRDIQTKVTADGNTMDHASVAVANIAPDQFLLLVAEGTEDQ
AIAAEELQDHNCSIAKRLTGQLDMETRR
>Mature_268_residues
MRRSIILVSVSVAIAMLTGASIAEAEPMPPNNPSAATRDALWKIVHDRCELGYQHTGAYAPCTLVDEQAGTALFKANYDP
NQYLLLPLARVTGIEDPALQELASPNYLYNAWAARGFVSSRLNNSLPEPDIFLAINPKNARTQDQLHIHISCVSPTTAEI
LKQVNWAEYVGWKPLPVTLQDHTYQALAVNRSTFESKSLFRDIQTKVTADGNTMDHASVAVANIAPDQFLLLVAEGTEDQ
AIAAEELQDHNCSIAKRLTGQLDMETRR

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family

Homologues:

Organism=Escherichia coli, GI1790352, Length=222, Percent_Identity=35.1351351351351, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CDH_MYCLB (B8ZRL0)

Other databases:

- EMBL:   FM211192
- RefSeq:   YP_002503637.1
- ProteinModelPortal:   B8ZRL0
- SMR:   B8ZRL0
- EnsemblBacteria:   EBMYCT00000086741
- GeneID:   7324969
- GenomeReviews:   FM211192_GR
- GeneTree:   EBGT00050000018626
- HOGENOM:   HBG565233
- OMA:   EIQDHEC
- ProtClustDB:   PRK05471
- HAMAP:   MF_00319
- InterPro:   IPR003763
- PIRSF:   PIRSF001273

Pfam domain/function: PF02611 CDH

EC number: =3.6.1.26

Molecular weight: Translated: 29482; Mature: 29482

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2a1161b4)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSIILVSVSVAIAMLTGASIAEAEPMPPNNPSAATRDALWKIVHDRCELGYQHTGAYA
CCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PCTLVDEQAGTALFKANYDPNQYLLLPLARVTGIEDPALQELASPNYLYNAWAARGFVSS
CEEEEECCCCCEEEEECCCCCEEEEEEEHHHCCCCCHHHHHHCCCCCEEHHHHHHHHHHH
RLNNSLPEPDIFLAINPKNARTQDQLHIHISCVSPTTAEILKQVNWAEYVGWKPLPVTLQ
HHHCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHCCCCCCEEEEC
DHTYQALAVNRSTFESKSLFRDIQTKVTADGNTMDHASVAVANIAPDQFLLLVAEGTEDQ
CCCEEEEEECCHHHHHHHHHHHHHHEEECCCCCCCCHHEEEEECCCCEEEEEEECCCCCC
AIAAEELQDHNCSIAKRLTGQLDMETRR
HHHHHHHHCCCCHHHHHHCCCCCCCCCH
>Mature Secondary Structure
MRRSIILVSVSVAIAMLTGASIAEAEPMPPNNPSAATRDALWKIVHDRCELGYQHTGAYA
CCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PCTLVDEQAGTALFKANYDPNQYLLLPLARVTGIEDPALQELASPNYLYNAWAARGFVSS
CEEEEECCCCCEEEEECCCCCEEEEEEEHHHCCCCCHHHHHHCCCCCEEHHHHHHHHHHH
RLNNSLPEPDIFLAINPKNARTQDQLHIHISCVSPTTAEILKQVNWAEYVGWKPLPVTLQ
HHHCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHCCCCCCEEEEC
DHTYQALAVNRSTFESKSLFRDIQTKVTADGNTMDHASVAVANIAPDQFLLLVAEGTEDQ
CCCEEEEEECCHHHHHHHHHHHHHHEEECCCCCCCCHHEEEEECCCCEEEEEEECCCCCC
AIAAEELQDHNCSIAKRLTGQLDMETRR
HHHHHHHHCCCCHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA