| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is argH
Identifier: 221230220
GI number: 221230220
Start: 1694817
End: 1696229
Strand: Direct
Name: argH
Synonym: MLBr_01413
Alternate gene names: 221230220
Gene position: 1694817-1696229 (Clockwise)
Preceding gene: 221230219
Following gene: 221230221
Centisome position: 51.86
GC content: 62.7
Gene sequence:
>1413_bases ATGAGCACCAATCAGGGTTCGCTGTGGGGCGGGCGGTTCGCAGCCGGCCCTTCAGAGGCTCTGGTCGCGCTGAGCAAGTC GACCCACTTCGACTGGGTGCTGGCTCCTTACGACATAACCGCGTCCCGGGCGCACACGAAAATGTTATTCCGAGCCGGAC TGCTCAATGAAGAGCAACGCGACGGGTTGTTAGCGGGATTGGACAACCTCGCCGAGGACGTTGCCGACGGCAGTTTCCTA CCACTGGTCACCGATGAGGACGTGCACGCTGCGTTGGAACGCGGACTGATCGATCGGGTCGGCCCTGACCTAGGCGGCCG GCTGCGAGCCGGCCGGTCACGCAACGATCAGGTGGCCACGCTGTTCCGGATGTGGCTACGCGACGCAGTGCGGCGAGTCG CTGCCGGCGCACTCGAGGTCGTCGATGCGCTGGCCAACCAAGCGGCCGAGCACTCGAGCACCATCATGCCTGGTAAGACC CACCTGCAGTCTGCCCAGCCGATCCTGCTGGCACACCATTTGTTGGCACACGCTCATCCGTTGCTGCGTGATGTGGGCCG GATTGTCGACTTCGACAAACGGGCCGCAGTGTCTCCGTATGGTTCGGGAGCATTGGCTGGCTCGTCGTTAGGCCTGGACC CGGACGCGATGGCCCAGGACCTGGGGTTCCCGGCTGCAGCCGACAATTCCGTCGACGCGACCGCCGCTCGCGATTTTGCA GCCGAGGCAGCGTTCGTCTTCGCCATGATCGCCGTCGACCTGTCGCGGCTCGCCGAAGACATCATTTTGTGGAGTTCGAC CGAATTCGGCTATGCCAGGCTACATGATTCGTGGTCTACCGGAAGCTCGATAATGCCTCAGAAAAAGAATCCGGACATCG CCGAACTGGCTCGCGGAAAGTCCGGGCGACTGATCGGAAACTTGGCTGGGTTGCTGGCGACACTGAAAGCTCAACCGCTC GCCTACAACCGCGACCTGCAAGAAGACAAGGAGCCAGTGTTCGATTCGGTGGCCCAGCTGGAGCTGCTGCTTCCGGCGAT GGCTGGTCTGGTAGCCAGCTTAACGTTCAACGTCGAGCGGATGGCTGCCCTAGCTCCTGCTGGCTATACACTGGCCACCG ACATCGCTGAATGGCTTGTGCGCCAAGGTGTTCCCTTTCGATCCGCACATGAGGCCGCGGGTACCGCGGTGCGGGTGGCT GAGGGTCGCGGCGTCGGACTTGAGGAACTGACCGACGACGAACTGGCTGCCATCAGCGCCAACTTGACGCCGCAGGTCCG CGAGGTGCTAACAGTCGAGGGCTCGGTGTCGTCGCGAGCGGCTCGTGGTGGTACCGCGCCTAGTCAAGCAGCCAAGCAAC TGACTGTGGTCCGCGCGAACGCAAACCAGTTGCGCCAACTCTTGATGCGCTAG
Upstream 100 bases:
>100_bases AGCTCGCGGCACGTAGGGACTTACGGTGAGGTAAGAGTGTGATATTGAGCGCCCCGACAAGGCGTCGTCAGATCCACACT TGGGGTGAAATGACAGGCCA
Downstream 100 bases:
>100_bases AGCTGCACCCTCGTGCCAGTACAATATTGACCAGCGCATGTTAAAATAAACCGGCAGACGTGCTACTGCGATCGCAAATA TAATCCGGCTCATTGGAGTG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MSTNQGSLWGGRFAAGPSEALVALSKSTHFDWVLAPYDITASRAHTKMLFRAGLLNEEQRDGLLAGLDNLAEDVADGSFL PLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVATLFRMWLRDAVRRVAAGALEVVDALANQAAEHSSTIMPGKT HLQSAQPILLAHHLLAHAHPLLRDVGRIVDFDKRAAVSPYGSGALAGSSLGLDPDAMAQDLGFPAAADNSVDATAARDFA AEAAFVFAMIAVDLSRLAEDIILWSSTEFGYARLHDSWSTGSSIMPQKKNPDIAELARGKSGRLIGNLAGLLATLKAQPL AYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVERMAALAPAGYTLATDIAEWLVRQGVPFRSAHEAAGTAVRVA EGRGVGLEELTDDELAAISANLTPQVREVLTVEGSVSSRAARGGTAPSQAAKQLTVVRANANQLRQLLMR
Sequences:
>Translated_470_residues MSTNQGSLWGGRFAAGPSEALVALSKSTHFDWVLAPYDITASRAHTKMLFRAGLLNEEQRDGLLAGLDNLAEDVADGSFL PLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVATLFRMWLRDAVRRVAAGALEVVDALANQAAEHSSTIMPGKT HLQSAQPILLAHHLLAHAHPLLRDVGRIVDFDKRAAVSPYGSGALAGSSLGLDPDAMAQDLGFPAAADNSVDATAARDFA AEAAFVFAMIAVDLSRLAEDIILWSSTEFGYARLHDSWSTGSSIMPQKKNPDIAELARGKSGRLIGNLAGLLATLKAQPL AYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVERMAALAPAGYTLATDIAEWLVRQGVPFRSAHEAAGTAVRVA EGRGVGLEELTDDELAAISANLTPQVREVLTVEGSVSSRAARGGTAPSQAAKQLTVVRANANQLRQLLMR >Mature_469_residues STNQGSLWGGRFAAGPSEALVALSKSTHFDWVLAPYDITASRAHTKMLFRAGLLNEEQRDGLLAGLDNLAEDVADGSFLP LVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVATLFRMWLRDAVRRVAAGALEVVDALANQAAEHSSTIMPGKTH LQSAQPILLAHHLLAHAHPLLRDVGRIVDFDKRAAVSPYGSGALAGSSLGLDPDAMAQDLGFPAAADNSVDATAARDFAA EAAFVFAMIAVDLSRLAEDIILWSSTEFGYARLHDSWSTGSSIMPQKKNPDIAELARGKSGRLIGNLAGLLATLKAQPLA YNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVERMAALAPAGYTLATDIAEWLVRQGVPFRSAHEAAGTAVRVAE GRGVGLEELTDDELAAISANLTPQVREVLTVEGSVSSRAARGGTAPSQAAKQLTVVRANANQLRQLLMR
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=460, Percent_Identity=43.695652173913, Blast_Score=364, Evalue=1e-101, Organism=Homo sapiens, GI68303542, Length=460, Percent_Identity=43.695652173913, Blast_Score=364, Evalue=1e-101, Organism=Homo sapiens, GI68303549, Length=460, Percent_Identity=41.304347826087, Blast_Score=331, Evalue=7e-91, Organism=Homo sapiens, GI68303547, Length=460, Percent_Identity=40.8695652173913, Blast_Score=327, Evalue=2e-89, Organism=Escherichia coli, GI1790398, Length=454, Percent_Identity=41.4096916299559, Blast_Score=324, Evalue=7e-90, Organism=Saccharomyces cerevisiae, GI6321806, Length=464, Percent_Identity=39.4396551724138, Blast_Score=328, Evalue=8e-91, Organism=Drosophila melanogaster, GI221473854, Length=458, Percent_Identity=41.4847161572052, Blast_Score=340, Evalue=2e-93, Organism=Drosophila melanogaster, GI78706858, Length=458, Percent_Identity=41.4847161572052, Blast_Score=340, Evalue=2e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY_MYCLB (B8ZRK9)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002503636.1 - ProteinModelPortal: B8ZRK9 - SMR: B8ZRK9 - EnsemblBacteria: EBMYCT00000085889 - GeneID: 7327221 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000016253 - HOGENOM: HBG539632 - OMA: MPGRTHL - ProtClustDB: PRK00855 - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 49937; Mature: 49806
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNQGSLWGGRFAAGPSEALVALSKSTHFDWVLAPYDITASRAHTKMLFRAGLLNEEQR CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHH DGLLAGLDNLAEDVADGSFLPLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAT CHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LFRMWLRDAVRRVAAGALEVVDALANQAAEHSSTIMPGKTHLQSAQPILLAHHLLAHAHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHH LLRDVGRIVDFDKRAAVSPYGSGALAGSSLGLDPDAMAQDLGFPAAADNSVDATAARDFA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH AEAAFVFAMIAVDLSRLAEDIILWSSTEFGYARLHDSWSTGSSIMPQKKNPDIAELARGK HHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCC SGRLIGNLAGLLATLKAQPLAYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVER CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAALAPAGYTLATDIAEWLVRQGVPFRSAHEAAGTAVRVAEGRGVGLEELTDDELAAISA HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCCCCHHHCCCHHHHHHCC NLTPQVREVLTVEGSVSSRAARGGTAPSQAAKQLTVVRANANQLRQLLMR CCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHEEEECCHHHHHHHHCC >Mature Secondary Structure STNQGSLWGGRFAAGPSEALVALSKSTHFDWVLAPYDITASRAHTKMLFRAGLLNEEQR CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHH DGLLAGLDNLAEDVADGSFLPLVTDEDVHAALERGLIDRVGPDLGGRLRAGRSRNDQVAT CHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LFRMWLRDAVRRVAAGALEVVDALANQAAEHSSTIMPGKTHLQSAQPILLAHHLLAHAHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHH LLRDVGRIVDFDKRAAVSPYGSGALAGSSLGLDPDAMAQDLGFPAAADNSVDATAARDFA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH AEAAFVFAMIAVDLSRLAEDIILWSSTEFGYARLHDSWSTGSSIMPQKKNPDIAELARGK HHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCC SGRLIGNLAGLLATLKAQPLAYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLTFNVER CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAALAPAGYTLATDIAEWLVRQGVPFRSAHEAAGTAVRVAEGRGVGLEELTDDELAAISA HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCCCCHHHCCCHHHHHHCC NLTPQVREVLTVEGSVSSRAARGGTAPSQAAKQLTVVRANANQLRQLLMR CCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA