| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230057
Identifier: 221230057
GI number: 221230057
Start: 1338927
End: 1339502
Strand: Reverse
Name: 221230057
Synonym: MLBr_01149
Alternate gene names: NA
Gene position: 1339502-1338927 (Counterclockwise)
Preceding gene: 221230059
Following gene: 221230056
Centisome position: 40.99
GC content: 55.9
Gene sequence:
>576_bases ATGGCAATACATCTGACCCGCATCTACACACGCACTGGCGACAACGGGACGACGGGGTTGAGCGATTTCTCACGAGTCGC GAAAACCGATCTCCGCCTCGTGGCGTACGCGGATTGCGACGAAACCAACTCCGCGATCGGCGTCGCACTTGCCCTGGGAA ATCCCGACCAAAAAATCACTGACGTACTGCAACAGATCCAAAATGACTTATTCGACGCTGGCGCAGACCTGTCCACCCCC ATGCAAGACTCGGTGAGAAATCCCGAATATCCCCAGCTAAGGATCACCCAGACACACATTGATCGGCTTGAAGAGTGGTG CGACACATACAACACACCGTTACCAACACTGAACTCATTTGTGCTACCAGGTGGTTCGCCGTTGTCAGCGCTACTACACG TCGCTCGTACCGTGGCGCGTCGAGCCGAACGATCAGCGTGGGCAGCTGTCGAAGCTCACCCGGGGGTGGTCAGTATGTTA CCCGCGAAATACCTGAACCGACTCTCAGATCTGCTCTTTATCCTGTCACGGGTGGCTAATACAGGCAATGATGTGCTGTG GCGACCAGGCGGCTGA
Upstream 100 bases:
>100_bases AGCGGTATCGGCTTGTCAGTCAACTAGCTTGGCTTCTCCTCACTCCGCTGAGCGGAGTGAGGAGAAGCCAAGCTAGTTGA CTTTAGTACCGTGTTTGGTC
Downstream 100 bases:
>100_bases TGGCAAAAGCTGTAGTAACACAGGAGAATTACCATGAAAAACAATCGTCCGATTCTTCCGGCGACCGTTATGCCGCACTC GCCTACCCGGACACACACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAIHLTRIYTRTGDNGTTGLSDFSRVAKTDLRLVAYADCDETNSAIGVALALGNPDQKITDVLQQIQNDLFDAGADLSTP MQDSVRNPEYPQLRITQTHIDRLEEWCDTYNTPLPTLNSFVLPGGSPLSALLHVARTVARRAERSAWAAVEAHPGVVSML PAKYLNRLSDLLFILSRVANTGNDVLWRPGG
Sequences:
>Translated_191_residues MAIHLTRIYTRTGDNGTTGLSDFSRVAKTDLRLVAYADCDETNSAIGVALALGNPDQKITDVLQQIQNDLFDAGADLSTP MQDSVRNPEYPQLRITQTHIDRLEEWCDTYNTPLPTLNSFVLPGGSPLSALLHVARTVARRAERSAWAAVEAHPGVVSML PAKYLNRLSDLLFILSRVANTGNDVLWRPGG >Mature_190_residues AIHLTRIYTRTGDNGTTGLSDFSRVAKTDLRLVAYADCDETNSAIGVALALGNPDQKITDVLQQIQNDLFDAGADLSTPM QDSVRNPEYPQLRITQTHIDRLEEWCDTYNTPLPTLNSFVLPGGSPLSALLHVARTVARRAERSAWAAVEAHPGVVSMLP AKYLNRLSDLLFILSRVANTGNDVLWRPGG
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family
Homologues:
Organism=Homo sapiens, GI16418349, Length=177, Percent_Identity=39.5480225988701, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI115534154, Length=180, Percent_Identity=35, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PDUO_MYCLE (P53523)
Other databases:
- EMBL: U15186 - EMBL: AL583920 - PIR: T09970 - RefSeq: NP_301843.1 - ProteinModelPortal: P53523 - SMR: P53523 - EnsemblBacteria: EBMYCT00000028511 - GeneID: 910243 - GenomeReviews: AL450380_GR - KEGG: mle:ML1149 - NMPDR: fig|272631.1.peg.715 - Leproma: ML1149 - GeneTree: EBGT00050000014642 - HOGENOM: HBG645545 - OMA: LEPLRSF - ProtClustDB: CLSK2517959 - BioCyc: MLEP272631:ML1149-MONOMER - GO: GO:0005737 - InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - Gene3D: G3DSA:1.20.1200.10 - PANTHER: PTHR12213 - ProDom: PD007457 - TIGRFAMs: TIGR00636
Pfam domain/function: PF01923 Cob_adeno_trans; SSF89028 AdoCbl_synth_CblAdoTrfase-like
EC number: =2.5.1.17
Molecular weight: Translated: 20916; Mature: 20785
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: BINDING 28-28 BINDING 166-166
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHLTRIYTRTGDNGTTGLSDFSRVAKTDLRLVAYADCDETNSAIGVALALGNPDQKIT CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEECCCCHHHH DVLQQIQNDLFDAGADLSTPMQDSVRNPEYPQLRITQTHIDRLEEWCDTYNTPLPTLNSF HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCE VLPGGSPLSALLHVARTVARRAERSAWAAVEAHPGVVSMLPAKYLNRLSDLLFILSRVAN ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC TGNDVLWRPGG CCCCEEECCCC >Mature Secondary Structure AIHLTRIYTRTGDNGTTGLSDFSRVAKTDLRLVAYADCDETNSAIGVALALGNPDQKIT EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEECCCCHHHH DVLQQIQNDLFDAGADLSTPMQDSVRNPEYPQLRITQTHIDRLEEWCDTYNTPLPTLNSF HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCE VLPGGSPLSALLHVARTVARRAERSAWAAVEAHPGVVSMLPAKYLNRLSDLLFILSRVAN ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC TGNDVLWRPGG CCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002