| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is pmmB [C]
Identifier: 221229776
GI number: 221229776
Start: 843856
End: 845472
Strand: Reverse
Name: pmmB [C]
Synonym: MLBr_00706
Alternate gene names: 221229776
Gene position: 845472-843856 (Counterclockwise)
Preceding gene: 221229777
Following gene: 221229775
Centisome position: 25.87
GC content: 64.07
Gene sequence:
>1617_bases TTGAAGGCTGCCGTGACACCCGAAGAGTGGATCACGCACGATCCCGACCCACAGACAGCCGCCGAGCTGGCCGCGTGCGA CCCCGATGAACTTGCGGCGCGGTTCACCCGTGCACTGCGCTTCGGCACGTCGGGCTTGCGCGGACCAGTGCGCGGCGGCC CCGACGCCATGAACCTAGCGGTGGTGTTGCGAGCGACCTGGGCCGTGGCACAGGTGCTCCTGCAACGAGCGGGCTCGCGG CCTGCAACCGTAATCGTCGGGCGCGACTCTCGGCACGGCTCGGCGGCATTCGTCGCTGCGACCGCTGAGGTGCTTGCCGC TGAAGGTTTTTCCGTTCTGCTGCTACCCAATCCGGCACCCACGCCGGTGGTGGCGTTTGCGGTGCGCAATACCGGCGCCG CGGCCGGGATCCAGATCACAGCATCGCACAACCCGCCGACCGATAACGGGTACAAGGTGTATTTCGACGGCGGCATCCAG ATCATCTCTCCCATTGACCACCAAATCGAAAACGCGATGGCCGCTGCTCCCCTGGCCGACCAGATCACCAGGAAACCCGT AAACCCCAGTGAAAACAGCGCCTCCGATCTGGTTGACCATTATATTCAGCGAGCGGCCGCGGTACGGCGCTCCAACGGTT CAGTTCGGGTTGCCCTTACACCGATGCACGGAGTGGGCGGTGCGGTAGCCGTCGAGACGCTGCGGCGCACCGGCTTTGAC GACGTGCACACCGTAGCGGCGCAGTTCGAGCCCGACCCCGACTTTCCAACCGTCGCGTTCCCAAACCCGGAGGAGCCCGG CGCCACCGACGCATTGCTGGCCCTGGCCGCCCATGTCGGGGCCGACGTCGCGATAGCACTGGACCCCGACGCCGACCGCT GCGCCGTTGGTATACCCACCAACTCGGGATGGCGGATGCTGTCCGGAGACGAAACCGGTTGGCTGCTAGGCGATTACATT TTGTCGCAAACCGACAAGCCGGAAACCGCCGTGGTAGCCAGTACCGTGGTGTCGTCGCGTATGTTGCCAGCAATCGCCAC ACACTACAACGCGGTCCACGTCGAGACCCTCACCGGCTTCAAGTGGCTGGCGCGCGCCGACGCAAACCTGCCGGGCACTC TTGTGTACGCCTATGAGGAAGCTATCGGGCATTGTGTCGACCCCACTGCCGTACGCGACAAAGACGGCATCAGCGCCGCG GTGTTAGTGTGCGATCTGGTTGCCGCACTGCACAAGCAGGGCCGCTCGGTGCCCGACATGCTTGACCAACTCGCCCTACG CCACGGCGTGCACGACGTTACAGCAATATCACGTCGCATTGGCCCCAAACAAACGGGAGTTGACGAGGCTGTCGACCTGA TTCAGCGGCTACGCGCAGCCCCGCCGAGTCAGCTGGCCGGGTTCACCGCGACCACTACCGATATCACCGACGCGCTAATC TTCACCGGCGGTGATGATGACACGTGGGTCCGGGTAGTGGTGCGGCTATCAGGAACCGAACCGAAGTTAAAGTGCTACTT GGAAGTTCGCTGCTCGGTGGCTGGCAACCTACCATCCACCCGACAACGGGCCAGGGTGCTGCGCGACGAGCTAGTCACCT TGGTGCAGCAGTGGTGA
Upstream 100 bases:
>100_bases GGATCACCGGCAAGCCACTTAACCATGCTGAGGTGCTTGCCGCGGGGACTGCGTCAGCGAACCGGATCGGGTCCCTGCTG GCCGACATCATAGCCCGGTT
Downstream 100 bases:
>100_bases TTCTCAGGTGAGTCAGCGGGGCCCAAATTGGCAGTCGCTGGCGTCACCGAAACCCGGCACAATCACAATATAGTGATTGC TTCGTTGAGTCCCTTGTCAA
Product: putative phospho-sugar mutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MKAAVTPEEWITHDPDPQTAAELAACDPDELAARFTRALRFGTSGLRGPVRGGPDAMNLAVVLRATWAVAQVLLQRAGSR PATVIVGRDSRHGSAAFVAATAEVLAAEGFSVLLLPNPAPTPVVAFAVRNTGAAAGIQITASHNPPTDNGYKVYFDGGIQ IISPIDHQIENAMAAAPLADQITRKPVNPSENSASDLVDHYIQRAAAVRRSNGSVRVALTPMHGVGGAVAVETLRRTGFD DVHTVAAQFEPDPDFPTVAFPNPEEPGATDALLALAAHVGADVAIALDPDADRCAVGIPTNSGWRMLSGDETGWLLGDYI LSQTDKPETAVVASTVVSSRMLPAIATHYNAVHVETLTGFKWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAA VLVCDLVAALHKQGRSVPDMLDQLALRHGVHDVTAISRRIGPKQTGVDEAVDLIQRLRAAPPSQLAGFTATTTDITDALI FTGGDDDTWVRVVVRLSGTEPKLKCYLEVRCSVAGNLPSTRQRARVLRDELVTLVQQW
Sequences:
>Translated_538_residues MKAAVTPEEWITHDPDPQTAAELAACDPDELAARFTRALRFGTSGLRGPVRGGPDAMNLAVVLRATWAVAQVLLQRAGSR PATVIVGRDSRHGSAAFVAATAEVLAAEGFSVLLLPNPAPTPVVAFAVRNTGAAAGIQITASHNPPTDNGYKVYFDGGIQ IISPIDHQIENAMAAAPLADQITRKPVNPSENSASDLVDHYIQRAAAVRRSNGSVRVALTPMHGVGGAVAVETLRRTGFD DVHTVAAQFEPDPDFPTVAFPNPEEPGATDALLALAAHVGADVAIALDPDADRCAVGIPTNSGWRMLSGDETGWLLGDYI LSQTDKPETAVVASTVVSSRMLPAIATHYNAVHVETLTGFKWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAA VLVCDLVAALHKQGRSVPDMLDQLALRHGVHDVTAISRRIGPKQTGVDEAVDLIQRLRAAPPSQLAGFTATTTDITDALI FTGGDDDTWVRVVVRLSGTEPKLKCYLEVRCSVAGNLPSTRQRARVLRDELVTLVQQW >Mature_538_residues MKAAVTPEEWITHDPDPQTAAELAACDPDELAARFTRALRFGTSGLRGPVRGGPDAMNLAVVLRATWAVAQVLLQRAGSR PATVIVGRDSRHGSAAFVAATAEVLAAEGFSVLLLPNPAPTPVVAFAVRNTGAAAGIQITASHNPPTDNGYKVYFDGGIQ IISPIDHQIENAMAAAPLADQITRKPVNPSENSASDLVDHYIQRAAAVRRSNGSVRVALTPMHGVGGAVAVETLRRTGFD DVHTVAAQFEPDPDFPTVAFPNPEEPGATDALLALAAHVGADVAIALDPDADRCAVGIPTNSGWRMLSGDETGWLLGDYI LSQTDKPETAVVASTVVSSRMLPAIATHYNAVHVETLTGFKWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAA VLVCDLVAALHKQGRSVPDMLDQLALRHGVHDVTAISRRIGPKQTGVDEAVDLIQRLRAAPPSQLAGFTATTTDITDALI FTGGDDDTWVRVVVRLSGTEPKLKCYLEVRCSVAGNLPSTRQRARVLRDELVTLVQQW
Specific function: Unknown
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=588, Percent_Identity=31.8027210884354, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31377548, Length=559, Percent_Identity=29.695885509839, Blast_Score=199, Evalue=4e-51, Organism=Escherichia coli, GI1789566, Length=477, Percent_Identity=26.8343815513627, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786904, Length=537, Percent_Identity=25.512104283054, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788361, Length=457, Percent_Identity=25.164113785558, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71993870, Length=553, Percent_Identity=31.4647377938517, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71993878, Length=304, Percent_Identity=33.2236842105263, Blast_Score=153, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6323934, Length=590, Percent_Identity=32.3728813559322, Blast_Score=235, Evalue=1e-62, Organism=Drosophila melanogaster, GI20129809, Length=564, Percent_Identity=30.1418439716312, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24651977, Length=490, Percent_Identity=31.8367346938775, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24653722, Length=467, Percent_Identity=29.5503211991435, Blast_Score=172, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 56998; Mature: 56998
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAVTPEEWITHDPDPQTAAELAACDPDELAARFTRALRFGTSGLRGPVRGGPDAMNLA CCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH VVLRATWAVAQVLLQRAGSRPATVIVGRDSRHGSAAFVAATAEVLAAEGFSVLLLPNPAP HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEECCCCC TPVVAFAVRNTGAAAGIQITASHNPPTDNGYKVYFDGGIQIISPIDHQIENAMAAAPLAD CCEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHCCHHH QITRKPVNPSENSASDLVDHYIQRAAAVRRSNGSVRVALTPMHGVGGAVAVETLRRTGFD HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC DVHTVAAQFEPDPDFPTVAFPNPEEPGATDALLALAAHVGADVAIALDPDADRCAVGIPT HHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCC NSGWRMLSGDETGWLLGDYILSQTDKPETAVVASTVVSSRMLPAIATHYNAVHVETLTGF CCCCEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCH KWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAVLVCDLVAALHKQGRSVPDM HHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH LDQLALRHGVHDVTAISRRIGPKQTGVDEAVDLIQRLRAAPPSQLAGFTATTTDITDALI HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEECCCCCCEEE FTGGDDDTWVRVVVRLSGTEPKLKCYLEVRCSVAGNLPSTRQRARVLRDELVTLVQQW EECCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAAVTPEEWITHDPDPQTAAELAACDPDELAARFTRALRFGTSGLRGPVRGGPDAMNLA CCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH VVLRATWAVAQVLLQRAGSRPATVIVGRDSRHGSAAFVAATAEVLAAEGFSVLLLPNPAP HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEECCCCC TPVVAFAVRNTGAAAGIQITASHNPPTDNGYKVYFDGGIQIISPIDHQIENAMAAAPLAD CCEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHCCHHH QITRKPVNPSENSASDLVDHYIQRAAAVRRSNGSVRVALTPMHGVGGAVAVETLRRTGFD HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC DVHTVAAQFEPDPDFPTVAFPNPEEPGATDALLALAAHVGADVAIALDPDADRCAVGIPT HHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCC NSGWRMLSGDETGWLLGDYILSQTDKPETAVVASTVVSSRMLPAIATHYNAVHVETLTGF CCCCEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCH KWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAVLVCDLVAALHKQGRSVPDM HHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH LDQLALRHGVHDVTAISRRIGPKQTGVDEAVDLIQRLRAAPPSQLAGFTATTTDITDALI HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEECCCCCCEEE FTGGDDDTWVRVVVRLSGTEPKLKCYLEVRCSVAGNLPSTRQRARVLRDELVTLVQQW EECCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]