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The map label for this gene is yhjD [H]

Identifier: 221229768

GI number: 221229768

Start: 823178

End: 824119

Strand: Direct

Name: yhjD [H]

Synonym: MLBr_00687

Alternate gene names: 221229768

Gene position: 823178-824119 (Clockwise)

Preceding gene: 221229767

Following gene: 221229774

Centisome position: 25.19

GC content: 55.2

Gene sequence:

>942_bases
ATGACGGAACCGGCCAACACGGGGATTATTGATCGGCTGCGGGGCCGGTTCAGATGGCTCGACCATGTTGTGCGCGCACA
CCAGCGCTTCGACGAGCGCAACGGCAGCTTTTTCGCGGCCGGTCTCACCTACTACACTATCTTCGCGCTGTTTCCTATGT
TGATGGTAAGTTTCTCGGTGGTGGGATTAGTGCTGTTTCGTCGTCCGGAGTTATTGACCACGATCGATGACCACATTCGG
TCTGCGGTATCTAGTCAGCTGGGACAGGAGCTGGTCGACTTGATGAATCGGGCGATCGATGCACGCGCGTCCGTCGGTGT
CGTTGGCCTGGCTACCGCGGCGTGGGCTGGTCTGTGCTGGATGTCGCATTTCCGTGCGGCGTTGACCAAAATGTGGTGGG
AGCACCATATCGATCCATCGAGCTTGCTACGCAACAAACTGTCTGATCTCTTGGCGATGGTGGGAACATTCGTGGTATTC
TTGACCACCCTAGCGCTCACCGTGCTGAGCCATCAGGCACCGATGGCCGCTATACTGAGATGTATTGGAATAACTCACTT
TTTTGTGTTCGGTGTGATTTTTCAGGGTGCGTCGGTCTTGGTGTCAACGCTGGTGTCCTGGTTGTTGTTTACTTGGATGA
TTGCCTGGTTACCGCGGAAGTCTGTCAATTTGGTTGCCTCGATGCGTGGCGGGTTGATAGCTGCCGTAGGGTTCGAACTT
TTCAAGCAAGTGGGGTCGATCTACCTGCAGATAGTGCTACGCAGCCCGGCAGGCAGCGTGTTTGGTCCGGTGCTTGGTGT
TATGGTGTTCTCCTATTTCACAGCGTATTTGGTTTTGTTCGCAGCCTCCTGGGCAGCGACAGCGGAGTTGTGCATGAAGC
CTGTCAGCGTTCAGCTCCCGTGGTCATATCTTTTCCCGGGTAGAGACGAAAGCGGGTCCTAG

Upstream 100 bases:

>100_bases
CGGTCGGAGCGCAGCGTGCTCAAGATGTGGCTGGCAAGACGATGCAGCGGGTTTACGACCGGCTGGGCTTTCTTCCGCAA
CGGGGGTAAGGCTTATCGCC

Downstream 100 bases:

>100_bases
CACACGTTAGGCGCTGACCACGATGGCCGTGGGAGCCGTTGTTGCGCTGTTATTTTCCGACTATCCCGCTGATCACCCGA
TCCCCGGTTACTGTGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTEPANTGIIDRLRGRFRWLDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSVVGLVLFRRPELLTTIDDHIR
SAVSSQLGQELVDLMNRAIDARASVGVVGLATAAWAGLCWMSHFRAALTKMWWEHHIDPSSLLRNKLSDLLAMVGTFVVF
LTTLALTVLSHQAPMAAILRCIGITHFFVFGVIFQGASVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFEL
FKQVGSIYLQIVLRSPAGSVFGPVLGVMVFSYFTAYLVLFAASWAATAELCMKPVSVQLPWSYLFPGRDESGS

Sequences:

>Translated_313_residues
MTEPANTGIIDRLRGRFRWLDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSVVGLVLFRRPELLTTIDDHIR
SAVSSQLGQELVDLMNRAIDARASVGVVGLATAAWAGLCWMSHFRAALTKMWWEHHIDPSSLLRNKLSDLLAMVGTFVVF
LTTLALTVLSHQAPMAAILRCIGITHFFVFGVIFQGASVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFEL
FKQVGSIYLQIVLRSPAGSVFGPVLGVMVFSYFTAYLVLFAASWAATAELCMKPVSVQLPWSYLFPGRDESGS
>Mature_312_residues
TEPANTGIIDRLRGRFRWLDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSVVGLVLFRRPELLTTIDDHIRS
AVSSQLGQELVDLMNRAIDARASVGVVGLATAAWAGLCWMSHFRAALTKMWWEHHIDPSSLLRNKLSDLLAMVGTFVVFL
TTLALTVLSHQAPMAAILRCIGITHFFVFGVIFQGASVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFELF
KQVGSIYLQIVLRSPAGSVFGPVLGVMVFSYFTAYLVLFAASWAATAELCMKPVSVQLPWSYLFPGRDESGS

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=278, Percent_Identity=34.5323741007194, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 34703; Mature: 34572

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPANTGIIDRLRGRFRWLDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
VGLVLFRRPELLTTIDDHIRSAVSSQLGQELVDLMNRAIDARASVGVVGLATAAWAGLCW
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MSHFRAALTKMWWEHHIDPSSLLRNKLSDLLAMVGTFVVFLTTLALTVLSHQAPMAAILR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
CIGITHFFVFGVIFQGASVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH
FKQVGSIYLQIVLRSPAGSVFGPVLGVMVFSYFTAYLVLFAASWAATAELCMKPVSVQLP
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
WSYLFPGRDESGS
HHHCCCCCCCCCC
>Mature Secondary Structure 
TEPANTGIIDRLRGRFRWLDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH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HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]