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The map label for this gene is psd

Identifier: 221229556

GI number: 221229556

Start: 397962

End: 398693

Strand: Reverse

Name: psd

Synonym: MLBr_00311

Alternate gene names: 221229556

Gene position: 398693-397962 (Counterclockwise)

Preceding gene: 221229557

Following gene: 221229555

Centisome position: 12.2

GC content: 65.3

Gene sequence:

>732_bases
GTGGCAAGACGCCCCCGCGCCGAATCCTCGAAGGAAGGCCCTGCGCATCTACTGGAGTTGGTGCGTTCCGCCGTTCCGCC
GGTTCACTCTGCTGGACACCCGTTTATCTCCGCTGGCCTGGCAGTGACCTCGGCCGGGGCAGTGGGACAAGTCGTCACCG
GACGTGATTTGCGCTGGCTACGCCGGGTGGGATTGCTGGCTGCCAGTGCCTGTGCAGTGTTCTTCCGTCACCCCTCGCGG
GTGCCACCCACCCGCGCCGGTGTCGTCGTCGCCCCCGCCGACGGCATGATCTGCGTAATCGACTCTGCCACGCCACCCGC
CGAACTCAGCATGGGCAACATGTCGCTGCCGAGAGTCAGCATCTTCCTGTCGCTATTGGACGTGCACGTGCAGCGTGCCC
CGATAAGCGGCGAGGTGATCGCCGTGCAATACCAGCCAGGCCGCTTTGGAGCAGCCGATCTGGCCCCGGCTAGCACCGAA
AACGAACGCACCAGCGTACGAATCCGCACAGCCGGCGGTACTGAGGTGGTAGTGGTGCAGATCGCAGGCCTGCTGGCCCG
CCGAATCGTGTGCTACGCGCACATCGGCGACAAGCTGACGATCGGTGACACATACGGACTGATCCGGTTTGGCTCCCGGC
TGGACACTTATCTGCCACCAGGTACCGAGCCGGTCGTCCAGGTGGGACAGCGGGCAGTCGCCGGCGAGACCGTGCTGGCC
GACCTGACATGA

Upstream 100 bases:

>100_bases
AGACCAAAGAACGTTGTGGAGGTGTCAACCGGGACTCAACTGCAAGTCTGGGATCTCAGGTAACTACGGCCGAGCAATGC
TGACTCCGTAAGATGACCGA

Downstream 100 bases:

>100_bases
CTAGCAGGCCCCGGAGCAGGCGAGCAGTAAACCTGCAGATCCTGCCCAGCTCGATGACGGTACTTTCTATCTGCGCGGGG
TTGACCTCCATCAGGTTCGC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MARRPRAESSKEGPAHLLELVRSAVPPVHSAGHPFISAGLAVTSAGAVGQVVTGRDLRWLRRVGLLAASACAVFFRHPSR
VPPTRAGVVVAPADGMICVIDSATPPAELSMGNMSLPRVSIFLSLLDVHVQRAPISGEVIAVQYQPGRFGAADLAPASTE
NERTSVRIRTAGGTEVVVVQIAGLLARRIVCYAHIGDKLTIGDTYGLIRFGSRLDTYLPPGTEPVVQVGQRAVAGETVLA
DLT

Sequences:

>Translated_243_residues
MARRPRAESSKEGPAHLLELVRSAVPPVHSAGHPFISAGLAVTSAGAVGQVVTGRDLRWLRRVGLLAASACAVFFRHPSR
VPPTRAGVVVAPADGMICVIDSATPPAELSMGNMSLPRVSIFLSLLDVHVQRAPISGEVIAVQYQPGRFGAADLAPASTE
NERTSVRIRTAGGTEVVVVQIAGLLARRIVCYAHIGDKLTIGDTYGLIRFGSRLDTYLPPGTEPVVQVGQRAVAGETVLA
DLT
>Mature_242_residues
ARRPRAESSKEGPAHLLELVRSAVPPVHSAGHPFISAGLAVTSAGAVGQVVTGRDLRWLRRVGLLAASACAVFFRHPSRV
PPTRAGVVVAPADGMICVIDSATPPAELSMGNMSLPRVSIFLSLLDVHVQRAPISGEVIAVQYQPGRFGAADLAPASTEN
ERTSVRIRTAGGTEVVVVQIAGLLARRIVCYAHIGDKLTIGDTYGLIRFGSRLDTYLPPGTEPVVQVGQRAVAGETVLAD
LT

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_MYCLB (B8ZUA0)

Other databases:

- EMBL:   FM211192
- RefSeq:   YP_002502972.1
- EnsemblBacteria:   EBMYCT00000087037
- GeneID:   7325019
- GenomeReviews:   FM211192_GR
- GeneTree:   EBGT00050000017584
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 25523; Mature: 25392

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPRAESSKEGPAHLLELVRSAVPPVHSAGHPFISAGLAVTSAGAVGQVVTGRDLRWL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCHHHCCCCCCCEEECCCHHHHH
RRVGLLAASACAVFFRHPSRVPPTRAGVVVAPADGMICVIDSATPPAELSMGNMSLPRVS
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHH
IFLSLLDVHVQRAPISGEVIAVQYQPGRFGAADLAPASTENERTSVRIRTAGGTEVVVVQ
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHH
IAGLLARRIVCYAHIGDKLTIGDTYGLIRFGSRLDTYLPPGTEPVVQVGQRAVAGETVLA
HHHHHHHHHHHEEECCCEEEECCCHHHHHCCCHHHCCCCCCCHHHHHHCCHHHCCCEEEE
DLT
ECC
>Mature Secondary Structure 
ARRPRAESSKEGPAHLLELVRSAVPPVHSAGHPFISAGLAVTSAGAVGQVVTGRDLRWL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCHHHCCCCCCCEEECCCHHHHH
RRVGLLAASACAVFFRHPSRVPPTRAGVVVAPADGMICVIDSATPPAELSMGNMSLPRVS
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHH
IFLSLLDVHVQRAPISGEVIAVQYQPGRFGAADLAPASTENERTSVRIRTAGGTEVVVVQ
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHH
IAGLLARRIVCYAHIGDKLTIGDTYGLIRFGSRLDTYLPPGTEPVVQVGQRAVAGETVLA
HHHHHHHHHHHEEECCCEEEECCCHHHHHCCCHHHCCCCCCCHHHHHHCCHHHCCCEEEE
DLT
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA