| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229458
Identifier: 221229458
GI number: 221229458
Start: 221684
End: 222628
Strand: Direct
Name: 221229458
Synonym: MLBr_00158
Alternate gene names: NA
Gene position: 221684-222628 (Clockwise)
Preceding gene: 221229457
Following gene: 221229459
Centisome position: 6.78
GC content: 61.38
Gene sequence:
>945_bases TTGCACTGCAGCAGTGGCGCCGTGACGGCACTGGAAATAACAGGAGGAGTCATGACCTACTTGCCCGGTAGTCCCGGATA TCCACTCGTGCAGCCCGCCGGATCCTACCCCGGCGCGACACCTTCTTTTGTCAAAAGCGATGTCGGTGAGAGCCAGCTTT ACCACTATTTGACGATCGCGGTGGTGGTACTCGGTTTGGCAGTGTATCTCGGAAATTTTGGCCCGACGTTTACATCGAGC TCCGACATTGGTCCAGGCTCCGGTGGATTTGCCGGTGATGCCGGCACTGCGGTCGTCGTTGCGCTGCTGGCCGCCCTGCT TGCCGGGTTGGATCTGCTACCCAAGGCGAAGAGCAGCGCCGGGGTAGTCGGGGCGATCGCGGTTCTGGGTGCGTTGTTGG CAATCTCGGAGATGATCAATATGCCCGCCGGCTTCTCGATCGGTTGGGCTATGTGGTTCATTCTGGTTTGCAGCGTGCTC CAAGCGATTGCCGCCGTCGCCGCGCTTCTACTGGAAGCTGGCATTATCACTGCGCCGGCACCGCGGCTGAGTTACGATCC TTACCTGCAGTACGGACAGTACGGGGCTCAATCGTATTACGGGCAGCCGAATAGACAGCTTCAGGTCGGACTGAACGCGC ACAGCCCGCAGCAGTCACCCGCCGGGTACGGGGCGCAGTACGGCGCTTATACTTCAAGCCCGACTCAGATCCAGGCAGGG ATGCCGGCTACTGGCGGATTCAGTGCGCAGCACTCGGCGCAACAAGGACCATCCACCCCACCCACCGGCTTCCCAAGCTT TAGCCCGCCACCATCGGTCGGCGCGGCCGCCGGGTCGCAGGCTGGTTCGGCTCCGGTTAGTTACTCCAATCCCACCGACA GTAAGCAGGGCTTCGGCCAGGGTCGTGAGTCGACGTCGTCATCATCGGGGTCAGCGCCGGTTTAA
Upstream 100 bases:
>100_bases CGGTCGCCCTAACGTGCGCTAGCGTTGATGATCGAATGCGCCGCAACGTAAGCGCTGCCAATTTGGGCGTTTATCCAACG GTGCGCATGGGAGCACAGCG
Downstream 100 bases:
>100_bases ACGGACGCTTTCGTGCCTAGCTGGGCAAATGCGCCAGGAACCACACGGGTGGGGGACAATCGGGCCGCGGGTGTTCGCCA GGCGCGTGACCTGGTAAAGG
Product: 34 kDa antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MHCSSGAVTALEITGGVMTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYLGNFGPTFTSS SDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVL QAIAAVAALLLEAGIITAPAPRLSYDPYLQYGQYGAQSYYGQPNRQLQVGLNAHSPQQSPAGYGAQYGAYTSSPTQIQAG MPATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQGFGQGRESTSSSSGSAPV
Sequences:
>Translated_314_residues MHCSSGAVTALEITGGVMTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYLGNFGPTFTSS SDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVL QAIAAVAALLLEAGIITAPAPRLSYDPYLQYGQYGAQSYYGQPNRQLQVGLNAHSPQQSPAGYGAQYGAYTSSPTQIQAG MPATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQGFGQGRESTSSSSGSAPV >Mature_314_residues MHCSSGAVTALEITGGVMTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYLGNFGPTFTSS SDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVL QAIAAVAALLLEAGIITAPAPRLSYDPYLQYGQYGAQSYYGQPNRQLQVGLNAHSPQQSPAGYGAQYGAYTSSPTQIQAG MPATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQGFGQGRESTSSSSGSAPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV0954 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31374; Mature: 31374
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHCSSGAVTALEITGGVMTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIA CCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH VVVLGLAVYLGNFGPTFTSSSDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEAGIITAPA CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRLSYDPYLQYGQYGAQSYYGQPNRQLQVGLNAHSPQQSPAGYGAQYGAYTSSPTQIQAG CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECC MPATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQGFGQ CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC GRESTSSSSGSAPV CCCCCCCCCCCCCC >Mature Secondary Structure MHCSSGAVTALEITGGVMTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIA CCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH VVVLGLAVYLGNFGPTFTSSSDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEAGIITAPA CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRLSYDPYLQYGQYGAQSYYGQPNRQLQVGLNAHSPQQSPAGYGAQYGAYTSSPTQIQAG CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECC MPATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQGFGQ CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC GRESTSSSSGSAPV CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8335649 [H]