| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229442
Identifier: 221229442
GI number: 221229442
Start: 179283
End: 179915
Strand: Direct
Name: 221229442
Synonym: MLBr_00133
Alternate gene names: NA
Gene position: 179283-179915 (Clockwise)
Preceding gene: 221229441
Following gene: 221229443
Centisome position: 5.49
GC content: 46.13
Gene sequence:
>633_bases ATGACCAATCGTACTCTGTCTAGGGAAGAAATCCGAAAGCTCGATCGCGACCTTCGGATACTTGTCGCAACGAATGGTAC CCTCACGCGGGTTCTCAACGTGGTTGCTAACGAAGAGATCGTCGTCGATATTATCAATCAACAACTTCTCGATGTAGCCC CGAAAATACCTGAATTAGAGAACTTGAAAATTGGTCGGATTCTTCAGCGTGACATCTTGCTTAAGGGCCAGAAATCAGGA ATACTGTTTGTTGCTGCGGAATCATTGATTGTCATTGATTTATTGCCCACCGCAATTACCACGTACTTGACGAAGACCCA TCATCCTATCGGCGAGATTATGGCAGCGAGCCGTATCGAGACTTATAAGGAGGACGCTCAGGTCTGGATAGGGGATTTAC CGTGTTGGCTCGCAGACTACGGATATTGGGATTTACCAAAAAGAGCTGTTGGTCGCCGATACAGGATCATAGCTGGAGGT CAACCGGTTATTATTACCACCGAGTATTTTCTTCGAAGTGTATTCCAAGACACTCCGCGTGAAGAACTCGATCGTTGCCA GTATTCAAATGACATTGACACCAGGAGTGGAGATCGCTTTGTCCTTCATGGTCGAGTCTTTAAAAATCTCTAG
Upstream 100 bases:
>100_bases GCCTGTGTCGAGCGTTATCTAAACCACGAATTCAACCGTCTAGACGCTACGGCATGAATGCCCACGTATGTGGGTTGTCC ACTTTACCCCGGGATGAGCA
Downstream 100 bases:
>100_bases TGCTAACAATGTCAGATTGCAGTCCTCGAGTCTGTGGAATGAAATTGCCTTGTGTGTAGTGTCACCAAATAGATATTTGT TCGTTCGACAAGCCAGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: 4-HB synthase; p-hydroxybenzoic acid synthase
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEIVVDIINQQLLDVAPKIPELENLKIGRILQRDILLKGQKSG ILFVAAESLIVIDLLPTAITTYLTKTHHPIGEIMAASRIETYKEDAQVWIGDLPCWLADYGYWDLPKRAVGRRYRIIAGG QPVIITTEYFLRSVFQDTPREELDRCQYSNDIDTRSGDRFVLHGRVFKNL
Sequences:
>Translated_210_residues MTNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEIVVDIINQQLLDVAPKIPELENLKIGRILQRDILLKGQKSG ILFVAAESLIVIDLLPTAITTYLTKTHHPIGEIMAASRIETYKEDAQVWIGDLPCWLADYGYWDLPKRAVGRRYRIIAGG QPVIITTEYFLRSVFQDTPREELDRCQYSNDIDTRSGDRFVLHGRVFKNL >Mature_209_residues TNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEIVVDIINQQLLDVAPKIPELENLKIGRILQRDILLKGQKSGI LFVAAESLIVIDLLPTAITTYLTKTHHPIGEIMAASRIETYKEDAQVWIGDLPCWLADYGYWDLPKRAVGRRYRIIAGGQ PVIITTEYFLRSVFQDTPREELDRCQYSNDIDTRSGDRFVLHGRVFKNL
Specific function: Removes the pyruvyl group from chorismate to provide 4- hydroxybenzoate (4HB). Involved in the synthesis of glycosylated p-hydroxybenzoic acid methyl esters (p-HBADs) and phenolic glycolipids (PGL) that play important roles in the pathogenesis of mycobact
COG id: COG3161
COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate--pyruvate lyase type 2 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHBS_MYCLE (Q9CD83)
Other databases:
- EMBL: AL583917 - PIR: E86925 - RefSeq: NP_301227.1 - ProteinModelPortal: Q9CD83 - SMR: Q9CD83 - EnsemblBacteria: EBMYCT00000028485 - GeneID: 908439 - GenomeReviews: AL450380_GR - KEGG: mle:ML0133 - NMPDR: fig|272631.1.peg.99 - Leproma: ML0133 - GeneTree: EBGT00050000018489 - HOGENOM: HBG569014 - OMA: LETHRPI - ProtClustDB: CLSK792184 - BioCyc: MLEP272631:ML0133-MONOMER - InterPro: IPR002800
Pfam domain/function: PF01947 DUF98
EC number: NA
Molecular weight: Translated: 24045; Mature: 23914
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEIVVDIINQQLLDVAPKIPELE CCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC NLKIGRILQRDILLKGQKSGILFVAAESLIVIDLLPTAITTYLTKTHHPIGEIMAASRIE CCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH TYKEDAQVWIGDLPCWLADYGYWDLPKRAVGRRYRIIAGGQPVIITTEYFLRSVFQDTPR HHHHHHHEEECCCCHHHHCCCCCCCCHHHHCCEEEEEECCCCEEEEHHHHHHHHHCCCCH EELDRCQYSNDIDTRSGDRFVLHGRVFKNL HHHHHHHCCCCCCCCCCCEEEEECHHHHCC >Mature Secondary Structure TNRTLSREEIRKLDRDLRILVATNGTLTRVLNVVANEEIVVDIINQQLLDVAPKIPELE CCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC NLKIGRILQRDILLKGQKSGILFVAAESLIVIDLLPTAITTYLTKTHHPIGEIMAASRIE CCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH TYKEDAQVWIGDLPCWLADYGYWDLPKRAVGRRYRIIAGGQPVIITTEYFLRSVFQDTPR HHHHHHHEEECCCCHHHHCCCCCCCCHHHHCCEEEEEECCCCEEEEHHHHHHHHHCCCCH EELDRCQYSNDIDTRSGDRFVLHGRVFKNL HHHHHHHCCCCCCCCCCCEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002