Click here to switch to the map view.

The map label for this gene is 220919531

Identifier: 220919531

GI number: 220919531

Start: 4955353

End: 4957020

Strand: Direct

Name: 220919531

Synonym: A2cp1_4452

Alternate gene names: NA

Gene position: 4955353-4957020 (Clockwise)

Preceding gene: 220919527

Following gene: 220919532

Centisome position: 98.53

GC content: 77.64

Gene sequence:

>1668_bases
ATGGATGCGTGCGTGGACGCCGCCGCTCGCCAGCCCCCGGGCCCTCCGCCACCCGGCCTCGACCTCCAGGCCCTGTCGGC
CCAGGCGTGGGCGCTCGAGCTGCCGACCCCGCGCGAGCGCCGCTCGGTGCTGCGCCACGACGCGGCGGAGCTCATCGATG
GCCTGTTGGTTCGCGTCGCCCGCGGCCAGGGCGCGCTCGACGTGGCGATCGGCGACGGCCTGGCGGCGCTCTCCCGCGGC
CCGGGTCCGCTCGCGCTTGGGTTCTCGAGCGTGGGCGACTACGCGCGCGAGCGGCTCGGCATCGCCCCGAGCACGGCGCA
GAAGCTGGCGGGCCTGTCCCGTGGGCTGCGCGACCGGCCGCTCCTGCGCGAGGCGGTGTGGCGCGGCGAGGTGAGCCCGC
GCAAGGCCCAGACCATCCTGAAGGTCGCCCGGGGCGCCGACGAGGCGGCCTGGGTGGCCCGGGCGCGCACGGAGACGGTC
CGTGCGCTGGCGGCGGCGGCCCGCGGCGCCGGGGCGGGCGGGCCGGAGGAGCCGGAGCGGCTCCTGCGCATCGACCTGCC
GCTGACCCCGCGCGGCCGCCCCTGGTTCGACCAGGCGCTCGCGCTGGCGGGCCGGATGCTCGGCGCCAGCGCGCCGCGCT
GGGCCCGCGTCGAGATCATGTGCCAGGAGTTCCTCTCGTCGCACCCGGAGCCGCTCGGACCGGACGGCCGGGTGCAGGGC
GCGGACGAGGCGGAGGAGGACTGGCCGGGCGGCGCCCGCAGCGAGTGGCTCGCGGCGGCCATGGAGGCGCTCGAGGCGGA
GACGGCGCGCTGGTCCTACCTCGAGGTGCTCGACCCGGTCGCGGCGCCGCCCTCGCCGGACGAGGACGGGGCCGATCCGA
ACGTCCTCGACGCGCGCCTCCGCGCGCTGGCCGGGCAGCGCGACCGCTGGGACGCGCTGCTCGGCCACCTGGGCCTGCTC
ATGATGAGCCTGCGCCTCTGGCGCGAGGCGGGCTTCGCCTCCTTCTCCCACTACTGCGCCGAGCGCCTGGGCATGTCGGC
CCGCGCGGTGGAGCAGCGCGCGGCGCTGGAGCGGCGGCTGTACGAGCTGCCGGCGCTCCGCGAGGCGATGGCGGCGGGGC
GCATCTCCTACGAGAAGGCCCGGGTCATCGCCGCGGCGGCGGACGCCGACACGGTCCACGACTGGATCGCGCGCGCCGGG
TCCACCCCCTGCGTCGCGCTCCGCCGCGAGGCGGACGCGCGGGAGGACGCGCGCGCGCAGATGTGCGCGCGCGGCGACCT
GCCGGTGCGCATGCCTCGCCGGGTGCTCTCGCTCCTCGAGGCGGTCATCCGCGCCGCCCGGGACGCGGCGGGGACCCGGC
TGGACGACGAGATCTGCCTCGAATGGATGGCGCTGCACTTCCTCCAGACGTGGCTCGACGCCGTCCCGCCGCCGCGGACG
CGTCACCAGCGCGTGCTCGAGCGCGACGGCGGGCTCTGCACGATGCCGGGCTGCTCCCGGAGCGCGGTCCATGCGCACCA
CCTCCAGCTCCGCTCCCGGGGCGGCTCCGACGATCCCTCCAACCTCACCTCGCTCTGCCTGGCCCACCACCTCGGCGGCG
TGCACGGTGGGTTCATCGAGCTGTCGGGGACGGCACCGCAGGGGCTGCGCGTGCGGCTCACGAGCTGA

Upstream 100 bases:

>100_bases
AACGGGCGTCGCCCCGCGCCTGCGCCTCCGCCCCCTGCGGCGAGCCGCCCCCGGCTGCGGCGCTGGGCGAGACATACGCT
CAGTGTCAGACACTCACGGT

Downstream 100 bases:

>100_bases
CCGCGCGCGCCGTGCCGCCCCTGGGCGGCGCCCCTCGCCGGCCCGCCCTCGGTGGTACGACCCGGCGACGGCTCGCCTGC
TCCCCGCCCGCGAGTACCCC

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MDACVDAAARQPPGPPPPGLDLQALSAQAWALELPTPRERRSVLRHDAAELIDGLLVRVARGQGALDVAIGDGLAALSRG
PGPLALGFSSVGDYARERLGIAPSTAQKLAGLSRGLRDRPLLREAVWRGEVSPRKAQTILKVARGADEAAWVARARTETV
RALAAAARGAGAGGPEEPERLLRIDLPLTPRGRPWFDQALALAGRMLGASAPRWARVEIMCQEFLSSHPEPLGPDGRVQG
ADEAEEDWPGGARSEWLAAAMEALEAETARWSYLEVLDPVAAPPSPDEDGADPNVLDARLRALAGQRDRWDALLGHLGLL
MMSLRLWREAGFASFSHYCAERLGMSARAVEQRAALERRLYELPALREAMAAGRISYEKARVIAAAADADTVHDWIARAG
STPCVALRREADAREDARAQMCARGDLPVRMPRRVLSLLEAVIRAARDAAGTRLDDEICLEWMALHFLQTWLDAVPPPRT
RHQRVLERDGGLCTMPGCSRSAVHAHHLQLRSRGGSDDPSNLTSLCLAHHLGGVHGGFIELSGTAPQGLRVRLTS

Sequences:

>Translated_555_residues
MDACVDAAARQPPGPPPPGLDLQALSAQAWALELPTPRERRSVLRHDAAELIDGLLVRVARGQGALDVAIGDGLAALSRG
PGPLALGFSSVGDYARERLGIAPSTAQKLAGLSRGLRDRPLLREAVWRGEVSPRKAQTILKVARGADEAAWVARARTETV
RALAAAARGAGAGGPEEPERLLRIDLPLTPRGRPWFDQALALAGRMLGASAPRWARVEIMCQEFLSSHPEPLGPDGRVQG
ADEAEEDWPGGARSEWLAAAMEALEAETARWSYLEVLDPVAAPPSPDEDGADPNVLDARLRALAGQRDRWDALLGHLGLL
MMSLRLWREAGFASFSHYCAERLGMSARAVEQRAALERRLYELPALREAMAAGRISYEKARVIAAAADADTVHDWIARAG
STPCVALRREADAREDARAQMCARGDLPVRMPRRVLSLLEAVIRAARDAAGTRLDDEICLEWMALHFLQTWLDAVPPPRT
RHQRVLERDGGLCTMPGCSRSAVHAHHLQLRSRGGSDDPSNLTSLCLAHHLGGVHGGFIELSGTAPQGLRVRLTS
>Mature_555_residues
MDACVDAAARQPPGPPPPGLDLQALSAQAWALELPTPRERRSVLRHDAAELIDGLLVRVARGQGALDVAIGDGLAALSRG
PGPLALGFSSVGDYARERLGIAPSTAQKLAGLSRGLRDRPLLREAVWRGEVSPRKAQTILKVARGADEAAWVARARTETV
RALAAAARGAGAGGPEEPERLLRIDLPLTPRGRPWFDQALALAGRMLGASAPRWARVEIMCQEFLSSHPEPLGPDGRVQG
ADEAEEDWPGGARSEWLAAAMEALEAETARWSYLEVLDPVAAPPSPDEDGADPNVLDARLRALAGQRDRWDALLGHLGLL
MMSLRLWREAGFASFSHYCAERLGMSARAVEQRAALERRLYELPALREAMAAGRISYEKARVIAAAADADTVHDWIARAG
STPCVALRREADAREDARAQMCARGDLPVRMPRRVLSLLEAVIRAARDAAGTRLDDEICLEWMALHFLQTWLDAVPPPRT
RHQRVLERDGGLCTMPGCSRSAVHAHHLQLRSRGGSDDPSNLTSLCLAHHLGGVHGGFIELSGTAPQGLRVRLTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59883; Mature: 59883

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDACVDAAARQPPGPPPPGLDLQALSAQAWALELPTPRERRSVLRHDAAELIDGLLVRVA
CCHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
RGQGALDVAIGDGLAALSRGPGPLALGFSSVGDYARERLGIAPSTAQKLAGLSRGLRDRP
CCCCCEEEEECCCHHHHCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH
LLREAVWRGEVSPRKAQTILKVARGADEAAWVARARTETVRALAAAARGAGAGGPEEPER
HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LLRIDLPLTPRGRPWFDQALALAGRMLGASAPRWARVEIMCQEFLSSHPEPLGPDGRVQG
HEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
ADEAEEDWPGGARSEWLAAAMEALEAETARWSYLEVLDPVAAPPSPDEDGADPNVLDARL
CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
RALAGQRDRWDALLGHLGLLMMSLRLWREAGFASFSHYCAERLGMSARAVEQRAALERRL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YELPALREAMAAGRISYEKARVIAAAADADTVHDWIARAGSTPCVALRREADAREDARAQ
HHHHHHHHHHHHCCCHHHHHHHEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHH
MCARGDLPVRMPRRVLSLLEAVIRAARDAAGTRLDDEICLEWMALHFLQTWLDAVPPPRT
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
RHQRVLERDGGLCTMPGCSRSAVHAHHLQLRSRGGSDDPSNLTSLCLAHHLGGVHGGFIE
HHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE
LSGTAPQGLRVRLTS
ECCCCCCCCEEEECC
>Mature Secondary Structure
MDACVDAAARQPPGPPPPGLDLQALSAQAWALELPTPRERRSVLRHDAAELIDGLLVRVA
CCHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
RGQGALDVAIGDGLAALSRGPGPLALGFSSVGDYARERLGIAPSTAQKLAGLSRGLRDRP
CCCCCEEEEECCCHHHHCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH
LLREAVWRGEVSPRKAQTILKVARGADEAAWVARARTETVRALAAAARGAGAGGPEEPER
HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LLRIDLPLTPRGRPWFDQALALAGRMLGASAPRWARVEIMCQEFLSSHPEPLGPDGRVQG
HEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
ADEAEEDWPGGARSEWLAAAMEALEAETARWSYLEVLDPVAAPPSPDEDGADPNVLDARL
CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
RALAGQRDRWDALLGHLGLLMMSLRLWREAGFASFSHYCAERLGMSARAVEQRAALERRL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YELPALREAMAAGRISYEKARVIAAAADADTVHDWIARAGSTPCVALRREADAREDARAQ
HHHHHHHHHHHHCCCHHHHHHHEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHH
MCARGDLPVRMPRRVLSLLEAVIRAARDAAGTRLDDEICLEWMALHFLQTWLDAVPPPRT
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
RHQRVLERDGGLCTMPGCSRSAVHAHHLQLRSRGGSDDPSNLTSLCLAHHLGGVHGGFIE
HHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE
LSGTAPQGLRVRLTS
ECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA