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The map label for this gene is rpe [H]

Identifier: 220919195

GI number: 220919195

Start: 4602059

End: 4602733

Strand: Direct

Name: rpe [H]

Synonym: A2cp1_4115

Alternate gene names: 220919195

Gene position: 4602059-4602733 (Clockwise)

Preceding gene: 220919194

Following gene: 220919201

Centisome position: 91.5

GC content: 73.63

Gene sequence:

>675_bases
ATGCCCCTGCCCATCCGCATCGCCCCGTCGATCCTCTCCGCCGACTTCGGCCGGCTCGCCGAGGAGGTCCGCGCGGTCGA
GGCCGCCGGCGCCGACGTGATCCACGTGGACGTGATGGACGGGCGGTTCGTGCCGAACATCACCATCGGCCCGCTGGTGG
TGGAGGCGGTGCGCAAGGTCACGAAGCTCCCGGTGGACGCGCACCTCATGATCGTCGAGCCGGAGAAGTACGTGGAGGCG
TTCGCGAAGGCGGGCGCCGACCTGGTCTCGGTGCACGCCGAGGTCTCGCCGCACCTCCACCGCACGCTGCAGGCCATCCG
CGCCGCGGGCGCGCGCCCGGCGGTGGCGCTCAACCCGTCCACCGACCTCACCGCCGTCGAGTACGTGCTCGGCGACTGCG
AGATGGTGCTCGTCATGACCGTCAACCCGGGCTTCGGCGGGCAGAAGTACATCGAGGCCTGCACCGAGAAGGTCCGCCGC
CTGCGGGCCATGGCGGACGCGCGCGGGCTGGCGCTCGAGATCGAGGTCGACGGCGGCGTGAAGCCGGAGACCGCCGCCAA
GGTCGCGGCGGCGGGCGCGAACGTGCTCGTCGCCGGCACGGCCGTGTTCGGTGCGCCGGACTACCGCCAGGCCATCGCGG
GCATCCGCGCCGCCGCGGAGCGCGGCCGCGGCTAG

Upstream 100 bases:

>100_bases
GCGCGGCGATCTCCTCACCCTCCCGAGCCGCCACGGGACCGACGGCTTCTACGCCGCGCGGCTGGTGCGGGACGTGCCCT
CCACCGACTAGGATCGCCCC

Downstream 100 bases:

>100_bases
TCGTCCTCGACCGGCTCGATCCGGACGCGCACCACGCCGTCCTCGACCATGCCGAGCTTGCGGGCCGCCGCGTAGGACAG
GTCCACCACCCGGCCGCCGG

Product: Ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKVTKLPVDAHLMIVEPEKYVEA
FAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPSTDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRR
LRAMADARGLALEIEVDGGVKPETAAKVAAAGANVLVAGTAVFGAPDYRQAIAGIRAAAERGRG

Sequences:

>Translated_224_residues
MPLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKVTKLPVDAHLMIVEPEKYVEA
FAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPSTDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRR
LRAMADARGLALEIEVDGGVKPETAAKVAAAGANVLVAGTAVFGAPDYRQAIAGIRAAAERGRG
>Mature_223_residues
PLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKVTKLPVDAHLMIVEPEKYVEAF
AKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPSTDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRL
RAMADARGLALEIEVDGGVKPETAAKVAAAGANVLVAGTAVFGAPDYRQAIAGIRAAAERGRG

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=213, Percent_Identity=41.7840375586854, Blast_Score=161, Evalue=4e-40,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=39.4366197183099, Blast_Score=147, Evalue=5e-36,
Organism=Homo sapiens, GI24307923, Length=167, Percent_Identity=34.7305389221557, Blast_Score=98, Evalue=8e-21,
Organism=Escherichia coli, GI1789788, Length=212, Percent_Identity=46.2264150943396, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI1790523, Length=198, Percent_Identity=37.3737373737374, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1790754, Length=207, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17552948, Length=228, Percent_Identity=42.1052631578947, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=41.6666666666667, Blast_Score=171, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24586301, Length=217, Percent_Identity=41.4746543778802, Blast_Score=167, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23474; Mature: 23343

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKV
CCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHHH
TKLPVDAHLMIVEPEKYVEAFAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPS
HHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCEEEECCC
TDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRLRAMADARGLALEIEVDGGV
CCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
KPETAAKVAAAGANVLVAGTAVFGAPDYRQAIAGIRAAAERGRG
CCHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKV
CCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHHH
TKLPVDAHLMIVEPEKYVEAFAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPS
HHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCEEEECCC
TDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRLRAMADARGLALEIEVDGGV
CCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
KPETAAKVAAAGANVLVAGTAVFGAPDYRQAIAGIRAAAERGRG
CCHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]