| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is pcaK [H]
Identifier: 220919143
GI number: 220919143
Start: 4540205
End: 4541590
Strand: Direct
Name: pcaK [H]
Synonym: A2cp1_4063
Alternate gene names: 220919143
Gene position: 4540205-4541590 (Clockwise)
Preceding gene: 220919142
Following gene: 220919144
Centisome position: 90.27
GC content: 77.85
Gene sequence:
>1386_bases ATGACCGCCCTGCCGGACAGCGCCACGGGTTCCCGGAGCGTGAACGTCACCGACCTCGTGGACGCGGGGCGGCTCGGGCG CTTCCACCTGGGCGCGTTCGCGGTGCTGGGCGGCTGCCTGGTGATGGACGGGTTCGACCTGCAGGCCATGGGCTACGCCG CGCCGGCGCTGGCGCGCGACTGGGGGCTGCCCATCGCCCGCCTCGGCCCGGTGTTCGGCGCCGGCCTGCTGGGCCTGTTC CTCGGCTCGATCCTGGCCGGCATGGCGGCCGACCGGATCGGCCGCCGCCCGGTGCTGATCGGCTCGACCGCGGCGTTCGG GGTCTTCACGCTCGCCACCGCGGCCGCCGGCTCCATGCCCTCGCTGCTCGCGGCCCGGTTCCTGGCCGGCCTCGGCCTCG GCGCCATCATGCCGAACGCCACCGCGCTGGTGGGCGAGTACGCGCCGCGCCGGAACCGCGTCGCGACCATGATGATCGTG ACGAACGGCTTCATGGTGGGCGCGGTCGCGGCCGGCGCGCTGTCCGCCTGGCTCGTCCCCGCGTACGGCTGGCGCGCGCC GTTCTGGATCGGCGGCGCCATCCCGCTCGTCCTGCTCCCGCCCATGGCGCGCTGGCTGCCCGAGTCGCTGCAGCTCCTGG CGGTCTCCGGGCGCCGGCCGGCGGAGCTGGCGCGCTGGCTGCGGCACGCCGCGCCGGGCGCACCGGTGGGCCCGGGCGTC CGCTACACCGTGCGCGAGGCTCCGCGCCGCGGGTTCGTGCTCGTGGAGCTGCTCCGCGGCGGGCGCGCCGCCGCGACGGT CCTGCTCTGGCTCGCGAACTTCGCGAACATGATCGTCATCTACGCGGTGGCGAGCTGGCTGCCCACGCTCGTGCGCGAGG CGGGCTTCTCCACCGCGACCGCGGTCTGGGCCGGCACCGCGGTGCAGCTCGGCGGGCTCGTCGGCACGGTGGTGCTGGGC CTCGTGCTCCAGCGGCTCGGCTTCGTGCCGGTGCTGGCGAGCTGCTTCGCGACGGCCGCGGCGTGCCTGCTCGTGCTGGG CCGCCCCGGCCTCCCGCTCCCGGCGCTCCTCACCGTCGCGTTCGTGGTGGGCTGGGCGGTGCAGGGCGGCCAGCCCGGCC TCAACGCGCTCGCCGCCACGTTCTACCCGACCGACCTCCGCTCCACCGGCATCGGCGCCGGGCTCGGCGTGGGCCGGCTG GGCGGCTTCCTCGGCCCGCTGGTGGCGGGCGCGATCCTGGCGCGCGGCGGCGGCGCGCAGGGCGTGTTCCAGGCCGCCGC GGTGCCGGCGGTCGCCTCCGCGCTCGTCATGCTCGCGCTGCGCCGGGCGGCCCCGGGCGTGGGCGCGCGCGCGCCGGAAG GCCACGCGCCGGCCGCCGGACGATGA
Upstream 100 bases:
>100_bases TGGGCATCCTGCTCACCTTCATGTTCCTCGGGAACATGGTCGCCGCGGTGGCGCTCGTGCCGGCGCTCTCCCGGCTCCTC CTCCGGGAGGTCCCCGCCCG
Downstream 100 bases:
>100_bases AGGCGCTTCCCGGCGCCTCCGCTCCCGGCTCGGTGGATTCACGGTGAGTGGATCCCGGCCCAGCGCAGCGCCTTCGCCGC GGCCGGCGATGTCCGCCGCG
Product: major facilitator superfamily protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTALPDSATGSRSVNVTDLVDAGRLGRFHLGAFAVLGGCLVMDGFDLQAMGYAAPALARDWGLPIARLGPVFGAGLLGLF LGSILAGMAADRIGRRPVLIGSTAAFGVFTLATAAAGSMPSLLAARFLAGLGLGAIMPNATALVGEYAPRRNRVATMMIV TNGFMVGAVAAGALSAWLVPAYGWRAPFWIGGAIPLVLLPPMARWLPESLQLLAVSGRRPAELARWLRHAAPGAPVGPGV RYTVREAPRRGFVLVELLRGGRAAATVLLWLANFANMIVIYAVASWLPTLVREAGFSTATAVWAGTAVQLGGLVGTVVLG LVLQRLGFVPVLASCFATAAACLLVLGRPGLPLPALLTVAFVVGWAVQGGQPGLNALAATFYPTDLRSTGIGAGLGVGRL GGFLGPLVAGAILARGGGAQGVFQAAAVPAVASALVMLALRRAAPGVGARAPEGHAPAAGR
Sequences:
>Translated_461_residues MTALPDSATGSRSVNVTDLVDAGRLGRFHLGAFAVLGGCLVMDGFDLQAMGYAAPALARDWGLPIARLGPVFGAGLLGLF LGSILAGMAADRIGRRPVLIGSTAAFGVFTLATAAAGSMPSLLAARFLAGLGLGAIMPNATALVGEYAPRRNRVATMMIV TNGFMVGAVAAGALSAWLVPAYGWRAPFWIGGAIPLVLLPPMARWLPESLQLLAVSGRRPAELARWLRHAAPGAPVGPGV RYTVREAPRRGFVLVELLRGGRAAATVLLWLANFANMIVIYAVASWLPTLVREAGFSTATAVWAGTAVQLGGLVGTVVLG LVLQRLGFVPVLASCFATAAACLLVLGRPGLPLPALLTVAFVVGWAVQGGQPGLNALAATFYPTDLRSTGIGAGLGVGRL GGFLGPLVAGAILARGGGAQGVFQAAAVPAVASALVMLALRRAAPGVGARAPEGHAPAAGR >Mature_460_residues TALPDSATGSRSVNVTDLVDAGRLGRFHLGAFAVLGGCLVMDGFDLQAMGYAAPALARDWGLPIARLGPVFGAGLLGLFL GSILAGMAADRIGRRPVLIGSTAAFGVFTLATAAAGSMPSLLAARFLAGLGLGAIMPNATALVGEYAPRRNRVATMMIVT NGFMVGAVAAGALSAWLVPAYGWRAPFWIGGAIPLVLLPPMARWLPESLQLLAVSGRRPAELARWLRHAAPGAPVGPGVR YTVREAPRRGFVLVELLRGGRAAATVLLWLANFANMIVIYAVASWLPTLVREAGFSTATAVWAGTAVQLGGLVGTVVLGL VLQRLGFVPVLASCFATAAACLLVLGRPGLPLPALLTVAFVVGWAVQGGQPGLNALAATFYPTDLRSTGIGAGLGVGRLG GFLGPLVAGAILARGGGAQGVFQAAAVPAVASALVMLALRRAAPGVGARAPEGHAPAAGR
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=427, Percent_Identity=26.463700234192, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI213021148, Length=455, Percent_Identity=22.8571428571429, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI7662270, Length=215, Percent_Identity=26.046511627907, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI216548223, Length=171, Percent_Identity=29.2397660818713, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI8923870, Length=381, Percent_Identity=26.509186351706, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87081723, Length=387, Percent_Identity=39.0180878552972, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI1786229, Length=371, Percent_Identity=29.3800539083558, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082159, Length=392, Percent_Identity=28.8265306122449, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082231, Length=453, Percent_Identity=25.3863134657837, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082404, Length=410, Percent_Identity=22.1951219512195, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788074, Length=366, Percent_Identity=25.1366120218579, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI32564663, Length=429, Percent_Identity=24.9417249417249, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17565978, Length=332, Percent_Identity=24.6987951807229, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI19922874, Length=416, Percent_Identity=21.1538461538462, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46700; Mature: 46569
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPDSATGSRSVNVTDLVDAGRLGRFHLGAFAVLGGCLVMDGFDLQAMGYAAPALARD CCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHH WGLPIARLGPVFGAGLLGLFLGSILAGMAADRIGRRPVLIGSTAAFGVFTLATAAAGSMP HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCH SLLAARFLAGLGLGAIMPNATALVGEYAPRRNRVATMMIVTNGFMVGAVAAGALSAWLVP HHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH AYGWRAPFWIGGAIPLVLLPPMARWLPESLQLLAVSGRRPAELARWLRHAAPGAPVGPGV CCCCCCCEEECCCCHHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCC RYTVREAPRRGFVLVELLRGGRAAATVLLWLANFANMIVIYAVASWLPTLVREAGFSTAT EEHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AVWAGTAVQLGGLVGTVVLGLVLQRLGFVPVLASCFATAAACLLVLGRPGLPLPALLTVA HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FVVGWAVQGGQPGLNALAATFYPTDLRSTGIGAGLGVGRLGGFLGPLVAGAILARGGGAQ HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GVFQAAAVPAVASALVMLALRRAAPGVGARAPEGHAPAAGR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TALPDSATGSRSVNVTDLVDAGRLGRFHLGAFAVLGGCLVMDGFDLQAMGYAAPALARD CCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHH WGLPIARLGPVFGAGLLGLFLGSILAGMAADRIGRRPVLIGSTAAFGVFTLATAAAGSMP HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCH SLLAARFLAGLGLGAIMPNATALVGEYAPRRNRVATMMIVTNGFMVGAVAAGALSAWLVP HHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH AYGWRAPFWIGGAIPLVLLPPMARWLPESLQLLAVSGRRPAELARWLRHAAPGAPVGPGV CCCCCCCEEECCCCHHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCC RYTVREAPRRGFVLVELLRGGRAAATVLLWLANFANMIVIYAVASWLPTLVREAGFSTAT EEHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AVWAGTAVQLGGLVGTVVLGLVLQRLGFVPVLASCFATAAACLLVLGRPGLPLPALLTVA HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FVVGWAVQGGQPGLNALAATFYPTDLRSTGIGAGLGVGRLGGFLGPLVAGAILARGGGAQ HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GVFQAAAVPAVASALVMLALRRAAPGVGARAPEGHAPAAGR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]