Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 220919144

GI number: 220919144

Start: 4541743

End: 4543023

Strand: Direct

Name: rmuC [H]

Synonym: A2cp1_4064

Alternate gene names: 220919144

Gene position: 4541743-4543023 (Clockwise)

Preceding gene: 220919143

Following gene: 220919145

Centisome position: 90.31

GC content: 75.02

Gene sequence:

>1281_bases
ATGAACGCCCTCGTCCCGATCCTCGTCGCCGCGCTCGCGGTCGCCGCCGCGGTGGCGGCGCTGGTGGCGCTGGTGCCGCC
GCGCGTGGCCGCGACGGTGCGCGCGCTGCTCGCCGACCGGCTCGACGCGGTCGAGCGCGCGCAGGAGCGGCTGGAGCGGA
CGCTGCGCGAGGAGCTGGGGCGCGGGCGCGCCGAGGCGGCGCAGGGGACGCAGCGGCTCCGCGAGGAGGTCCGCGCCTCG
CTGGGCGAGTCGCTCGGCCGGATGGGCGAGGCCACCGAGCGCCGGCTCGACGCGCTGCGCGCCACGGTGGAGCAGCGGCT
GAAGGTGCTGCAGGAGGAGAACGGCGCGCGCCTCGAGCAGATGCGCGCCACCGTGGACGAGAAGCTGCAGGGCACGCTCG
AGAAGCGCCTGGGCGAGTCGTTCCGGCTGGTGAGCGAGCGCCTCGAGGCGGTGCAGCGCGGCCTGGGCGAGATGCAGACG
CTCGCGAACGGGGTGGGCGACCTGAAGCGCGTGCTCGCGAACGTGAAGGTGCGCGGCACGTTCGGCGAGGTGCAGCTCGA
GGCGCTGCTCGAGCAGCTCCTCGCGCCGGAGCAGCTCGCGAAGAACGTCGCTACGCGCCCCGGCTCGGGGGAGCGGGTCG
AGTTCGCGATCCGGCTCCCCGGCCACGACGGGGCGCGCACCGAGGTGCTGCTGCCCATCGACGCGAAGTTCCCCATCGAG
GACTACCAGCGCCTGGTGGACGCGTCGGAGCGCGGCGACGCCGCCCGCGTCGAGGAGGTGAGCCGCGCGCTGGAGGTGCG
CGTCCGCGGCTGCGCCCGCGACATCCACGACAAGTACATCGCGCCGCCCGGCACCACCGACTTCGCGCTGCTGTACCTGC
CCACCGAGGGGCTCTACGCCGAGGTGGTCCGCCGCCCCGGCCTCACCGAGGCGCTGCAGCGCGACCTCCAGGTGGTGGTG
GCCGGGCCGACCACGCTCGCCGCGCTGCTCAACAGCCTGCAGATGGGCTTCCGCACGCTCGCCATCCAGAAGCGCTCGAG
CGAGGTGTGGCAGGTGCTCGGCGCGGTGAAGACCGAGTTCGGCAAGTTCGGGCAGGTGATCGAGAAGGTGGACCGGAAGC
TCCAGGAGGCCTCCACCACGCTCGGCACGGTCGCGACGCGCAGCCGCGCCATCCAGCGGCGGCTCCGCGACGTGGAGGCG
CTCCCGGCCGTCGACGCCGCGGCGCACCTGCCCGCGATCGACCCCGCGCTCGAGCCGGTGGAGGACGACGTGCCGGCGTA
G

Upstream 100 bases:

>100_bases
TCCCGGCCCAGCGCAGCGCCTTCGCCGCGGCCGGCGATGTCCGCCGCGGGTGCTAGCCTCGGGGCGTACGGGCGCGCCGC
ATGCGCCCGGGGGAGCCCCG

Downstream 100 bases:

>100_bases
GCCGGCCCCTGTCCACCCGCGCGCGACGATGTCCCCATGCCGGCCGCGTCCACGCCGCGCCTGATACGCACCCTCGGTCA
CGCGCTCGTCCGCGGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNALVPILVAALAVAAAVAALVALVPPRVAATVRALLADRLDAVERAQERLERTLREELGRGRAEAAQGTQRLREEVRAS
LGESLGRMGEATERRLDALRATVEQRLKVLQEENGARLEQMRATVDEKLQGTLEKRLGESFRLVSERLEAVQRGLGEMQT
LANGVGDLKRVLANVKVRGTFGEVQLEALLEQLLAPEQLAKNVATRPGSGERVEFAIRLPGHDGARTEVLLPIDAKFPIE
DYQRLVDASERGDAARVEEVSRALEVRVRGCARDIHDKYIAPPGTTDFALLYLPTEGLYAEVVRRPGLTEALQRDLQVVV
AGPTTLAALLNSLQMGFRTLAIQKRSSEVWQVLGAVKTEFGKFGQVIEKVDRKLQEASTTLGTVATRSRAIQRRLRDVEA
LPAVDAAAHLPAIDPALEPVEDDVPA

Sequences:

>Translated_426_residues
MNALVPILVAALAVAAAVAALVALVPPRVAATVRALLADRLDAVERAQERLERTLREELGRGRAEAAQGTQRLREEVRAS
LGESLGRMGEATERRLDALRATVEQRLKVLQEENGARLEQMRATVDEKLQGTLEKRLGESFRLVSERLEAVQRGLGEMQT
LANGVGDLKRVLANVKVRGTFGEVQLEALLEQLLAPEQLAKNVATRPGSGERVEFAIRLPGHDGARTEVLLPIDAKFPIE
DYQRLVDASERGDAARVEEVSRALEVRVRGCARDIHDKYIAPPGTTDFALLYLPTEGLYAEVVRRPGLTEALQRDLQVVV
AGPTTLAALLNSLQMGFRTLAIQKRSSEVWQVLGAVKTEFGKFGQVIEKVDRKLQEASTTLGTVATRSRAIQRRLRDVEA
LPAVDAAAHLPAIDPALEPVEDDVPA
>Mature_426_residues
MNALVPILVAALAVAAAVAALVALVPPRVAATVRALLADRLDAVERAQERLERTLREELGRGRAEAAQGTQRLREEVRAS
LGESLGRMGEATERRLDALRATVEQRLKVLQEENGARLEQMRATVDEKLQGTLEKRLGESFRLVSERLEAVQRGLGEMQT
LANGVGDLKRVLANVKVRGTFGEVQLEALLEQLLAPEQLAKNVATRPGSGERVEFAIRLPGHDGARTEVLLPIDAKFPIE
DYQRLVDASERGDAARVEEVSRALEVRVRGCARDIHDKYIAPPGTTDFALLYLPTEGLYAEVVRRPGLTEALQRDLQVVV
AGPTTLAALLNSLQMGFRTLAIQKRSSEVWQVLGAVKTEFGKFGQVIEKVDRKLQEASTTLGTVATRSRAIQRRLRDVEA
LPAVDAAAHLPAIDPALEPVEDDVPA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 46494; Mature: 46494

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALVPILVAALAVAAAVAALVALVPPRVAATVRALLADRLDAVERAQERLERTLREELG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGRAEAAQGTQRLREEVRASLGESLGRMGEATERRLDALRATVEQRLKVLQEENGARLEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
MRATVDEKLQGTLEKRLGESFRLVSERLEAVQRGLGEMQTLANGVGDLKRVLANVKVRGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
FGEVQLEALLEQLLAPEQLAKNVATRPGSGERVEFAIRLPGHDGARTEVLLPIDAKFPIE
HHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCHH
DYQRLVDASERGDAARVEEVSRALEVRVRGCARDIHDKYIAPPGTTDFALLYLPTEGLYA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHH
EVVRRPGLTEALQRDLQVVVAGPTTLAALLNSLQMGFRTLAIQKRSSEVWQVLGAVKTEF
HHHHCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKFGQVIEKVDRKLQEASTTLGTVATRSRAIQRRLRDVEALPAVDAAAHLPAIDPALEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCC
EDDVPA
CCCCCC
>Mature Secondary Structure
MNALVPILVAALAVAAAVAALVALVPPRVAATVRALLADRLDAVERAQERLERTLREELG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGRAEAAQGTQRLREEVRASLGESLGRMGEATERRLDALRATVEQRLKVLQEENGARLEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
MRATVDEKLQGTLEKRLGESFRLVSERLEAVQRGLGEMQTLANGVGDLKRVLANVKVRGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
FGEVQLEALLEQLLAPEQLAKNVATRPGSGERVEFAIRLPGHDGARTEVLLPIDAKFPIE
HHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCHH
DYQRLVDASERGDAARVEEVSRALEVRVRGCARDIHDKYIAPPGTTDFALLYLPTEGLYA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHH
EVVRRPGLTEALQRDLQVVVAGPTTLAALLNSLQMGFRTLAIQKRSSEVWQVLGAVKTEF
HHHHCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKFGQVIEKVDRKLQEASTTLGTVATRSRAIQRRLRDVEALPAVDAAAHLPAIDPALEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCC
EDDVPA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]