Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is 220918953

Identifier: 220918953

GI number: 220918953

Start: 4303255

End: 4304880

Strand: Direct

Name: 220918953

Synonym: A2cp1_3868

Alternate gene names: NA

Gene position: 4303255-4304880 (Clockwise)

Preceding gene: 220918951

Following gene: 220918954

Centisome position: 85.56

GC content: 82.53

Gene sequence:

>1626_bases
GTGAAGCGCCTCCGCCCGATCCCCGCCCTGCTCGCCGTGCCGCTCGCGCTGCTCGCCGCGTGCGCGCACCGCGCGCCCGC
CACCCCCCCGACGCCGGCGACCGCCGCGCCGCCGTCGCCCGAGCCGGGCAGCGCCGCCACCACCGCCGCGCTCGCGCCGC
TGCGGGCCGGCGCCGACGCGGTGCTGCGCGCGCAGGCGGAGGCGTACTGGGAGGTGTTCACGAAAGGTGCGGACGCGGAC
CCGGCGGGCGCCTGGAAGGGCCACGAGGACCTGCTCGCGGATCCGGCGCTCGCGGCGGCGCGGGCGGCGGTGGAGGCCGA
GCGCGGCGACGGGCGACGGGCCGCGGCGTACCTGCGCGCCTGGCTCGTCGGCGAGCGGCTGGCGCGCGACCTCGCCGAGC
CGGTGCGGCGCGTCGCCGAGGCGCGCACCGCCGCGCACTTCCGCTGGGCCGGGCACGAGGTGCCGGTGCGCGAGTCGGCC
GCGCTGCTCGCGGCGGAGCCCGAGCCCGCCCGCCGCCGCGCGCTCGCCGAGGCCGCCGCCCAGGCCGCGAGCCCGGTCGC
GCCGCTGATCGAGGCGCGCGACGCCCGGCTCGCGGCCGCTGCCCGGACGCTCGGCTATCCGTCGCCGGAGGCGCTCGCGA
CCGACCTGCGCGGCGAGTCCCCCGCGGTGCTGGGCGCGCTCGCCGACGCGGTGCTCGCCCGGACCGACGCGACCTGGCGC
GCGCTCGTCGCCGACCTGGCCGGGCGCGAGGGGATGGCGCCGGAGGCGGTCCGGGCCCGCGACCTGCCGCGGCTGGTGCG
CCCGGCGGCGCCCGCGTCCGCGTTCCCGGCCGGCAAGGCGCTCGACGCCGGCGCGGCGATCCTGTCCGGCCTGGGCCTCG
ACCTCGCGGCCCAGCGCAACCTGCTCCTCGACGCGGCGGCGCGGCCCGGCAAGCTGCCTCACGCCATCGCGCTGCCGGTG
GACCCGCCGCGCGACGTGCGGCTCTCCGCGGCGCCGGTCTCGGGCATGGAGGCGCTCCGCGGCGTGCTCCACGAGCTGGG
CGCGGCGCTCGCCTACGCGCACGTGGCGCCCCAGGCGCCGCTCGAGTTCCGGCGGCTCGGCCCGGGCGCGGTGAGCGGCG
CGTGGGCCATCCTGCTCGAGGAGGTGGCCGGCGCGCCGCAGTGGCTCGAGGCGCAGGGCCTCGACGCCGACCAGGCGCGC
GCCGAGGCGCGCAGCGCCGCCGCGCGCCGGCTCATGCGCACCCGCGAGGCGGCCGCCCGCGTGCTCGCGGCGCTCGCGCC
GGCCGGCCCCGCCGGCGCCGAGGCCCGCGCCGCGCTCCCCGCGCGCGCCTACGGGTGCCCGGTGGAGGAGCCGGACCTCG
CGGCCTGGCGGCTCGAGCCCGATCCGCTGCTGCGCTCCGCCGAGGCGCTCCGCGCCGAGCTGCTCGCCGCGCAGGCCGAG
CAGTTCCTCGCCGGCCGCGCCGCGGCGCCGGCCTGGTGGGGCTCGCCGGCGGCCGGCGCGTGGCTGGTGCGCACCTGGGC
GGACGGCACGCGGCGCACGCCGGAGGAGCTGTCGCTGGCCATGGGCATGCCCGGCCTCGACGCGGCCGCGCTCGACCAGG
TGGTGCGGGCGAGGACCGGGCTGTAG

Upstream 100 bases:

>100_bases
CCGGGCGGCCTCCCTGCGGCGATCGCTCATGCGGCGGACTCTACCGCCGCGCCCTCCCGTGCGCGCGAGAACCCGCGCGC
CGCGCTAAGATCCCCGCCTC

Downstream 100 bases:

>100_bases
CGCCGCGGCCGGGCTGCCGCGCGCGCGACGGAATGTGCGTGCCCCGCCGCCGCGCCCGGCGCTACCATCGCGCCGGATGG
CCGCCGCACCTGCCCCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKRLRPIPALLAVPLALLAACAHRAPATPPTPATAAPPSPEPGSAATTAALAPLRAGADAVLRAQAEAYWEVFTKGADAD
PAGAWKGHEDLLADPALAAARAAVEAERGDGRRAAAYLRAWLVGERLARDLAEPVRRVAEARTAAHFRWAGHEVPVRESA
ALLAAEPEPARRRALAEAAAQAASPVAPLIEARDARLAAAARTLGYPSPEALATDLRGESPAVLGALADAVLARTDATWR
ALVADLAGREGMAPEAVRARDLPRLVRPAAPASAFPAGKALDAGAAILSGLGLDLAAQRNLLLDAAARPGKLPHAIALPV
DPPRDVRLSAAPVSGMEALRGVLHELGAALAYAHVAPQAPLEFRRLGPGAVSGAWAILLEEVAGAPQWLEAQGLDADQAR
AEARSAAARRLMRTREAAARVLAALAPAGPAGAEARAALPARAYGCPVEEPDLAAWRLEPDPLLRSAEALRAELLAAQAE
QFLAGRAAAPAWWGSPAAGAWLVRTWADGTRRTPEELSLAMGMPGLDAAALDQVVRARTGL

Sequences:

>Translated_541_residues
MKRLRPIPALLAVPLALLAACAHRAPATPPTPATAAPPSPEPGSAATTAALAPLRAGADAVLRAQAEAYWEVFTKGADAD
PAGAWKGHEDLLADPALAAARAAVEAERGDGRRAAAYLRAWLVGERLARDLAEPVRRVAEARTAAHFRWAGHEVPVRESA
ALLAAEPEPARRRALAEAAAQAASPVAPLIEARDARLAAAARTLGYPSPEALATDLRGESPAVLGALADAVLARTDATWR
ALVADLAGREGMAPEAVRARDLPRLVRPAAPASAFPAGKALDAGAAILSGLGLDLAAQRNLLLDAAARPGKLPHAIALPV
DPPRDVRLSAAPVSGMEALRGVLHELGAALAYAHVAPQAPLEFRRLGPGAVSGAWAILLEEVAGAPQWLEAQGLDADQAR
AEARSAAARRLMRTREAAARVLAALAPAGPAGAEARAALPARAYGCPVEEPDLAAWRLEPDPLLRSAEALRAELLAAQAE
QFLAGRAAAPAWWGSPAAGAWLVRTWADGTRRTPEELSLAMGMPGLDAAALDQVVRARTGL
>Mature_541_residues
MKRLRPIPALLAVPLALLAACAHRAPATPPTPATAAPPSPEPGSAATTAALAPLRAGADAVLRAQAEAYWEVFTKGADAD
PAGAWKGHEDLLADPALAAARAAVEAERGDGRRAAAYLRAWLVGERLARDLAEPVRRVAEARTAAHFRWAGHEVPVRESA
ALLAAEPEPARRRALAEAAAQAASPVAPLIEARDARLAAAARTLGYPSPEALATDLRGESPAVLGALADAVLARTDATWR
ALVADLAGREGMAPEAVRARDLPRLVRPAAPASAFPAGKALDAGAAILSGLGLDLAAQRNLLLDAAARPGKLPHAIALPV
DPPRDVRLSAAPVSGMEALRGVLHELGAALAYAHVAPQAPLEFRRLGPGAVSGAWAILLEEVAGAPQWLEAQGLDADQAR
AEARSAAARRLMRTREAAARVLAALAPAGPAGAEARAALPARAYGCPVEEPDLAAWRLEPDPLLRSAEALRAELLAAQAE
QFLAGRAAAPAWWGSPAAGAWLVRTWADGTRRTPEELSLAMGMPGLDAAALDQVVRARTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55827; Mature: 55827

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLRPIPALLAVPLALLAACAHRAPATPPTPATAAPPSPEPGSAATTAALAPLRAGADA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH
VLRAQAEAYWEVFTKGADADPAGAWKGHEDLLADPALAAARAAVEAERGDGRRAAAYLRA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH
WLVGERLARDLAEPVRRVAEARTAAHFRWAGHEVPVRESAALLAAEPEPARRRALAEAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHCCCEEECCCCHHHHHHHHHHHH
QAASPVAPLIEARDARLAAAARTLGYPSPEALATDLRGESPAVLGALADAVLARTDATWR
HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHH
ALVADLAGREGMAPEAVRARDLPRLVRPAAPASAFPAGKALDAGAAILSGLGLDLAAQRN
HHHHHHHCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCC
LLLDAAARPGKLPHAIALPVDPPRDVRLSAAPVSGMEALRGVLHELGAALAYAHVAPQAP
HHHHCCCCCCCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LEFRRLGPGAVSGAWAILLEEVAGAPQWLEAQGLDADQARAEARSAAARRLMRTREAAAR
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLAALAPAGPAGAEARAALPARAYGCPVEEPDLAAWRLEPDPLLRSAEALRAELLAAQAE
HHHHHCCCCCCCCCHHHHCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
QFLAGRAAAPAWWGSPAAGAWLVRTWADGTRRTPEELSLAMGMPGLDAAALDQVVRARTG
HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MKRLRPIPALLAVPLALLAACAHRAPATPPTPATAAPPSPEPGSAATTAALAPLRAGADA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH
VLRAQAEAYWEVFTKGADADPAGAWKGHEDLLADPALAAARAAVEAERGDGRRAAAYLRA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH
WLVGERLARDLAEPVRRVAEARTAAHFRWAGHEVPVRESAALLAAEPEPARRRALAEAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHCCCEEECCCCHHHHHHHHHHHH
QAASPVAPLIEARDARLAAAARTLGYPSPEALATDLRGESPAVLGALADAVLARTDATWR
HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHH
ALVADLAGREGMAPEAVRARDLPRLVRPAAPASAFPAGKALDAGAAILSGLGLDLAAQRN
HHHHHHHCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCC
LLLDAAARPGKLPHAIALPVDPPRDVRLSAAPVSGMEALRGVLHELGAALAYAHVAPQAP
HHHHCCCCCCCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LEFRRLGPGAVSGAWAILLEEVAGAPQWLEAQGLDADQARAEARSAAARRLMRTREAAAR
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLAALAPAGPAGAEARAALPARAYGCPVEEPDLAAWRLEPDPLLRSAEALRAELLAAQAE
HHHHHCCCCCCCCCHHHHCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
QFLAGRAAAPAWWGSPAAGAWLVRTWADGTRRTPEELSLAMGMPGLDAAALDQVVRARTG
HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA