Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is 220918904

Identifier: 220918904

GI number: 220918904

Start: 4243662

End: 4244411

Strand: Direct

Name: 220918904

Synonym: A2cp1_3818

Alternate gene names: NA

Gene position: 4243662-4244411 (Clockwise)

Preceding gene: 220918903

Following gene: 220918905

Centisome position: 84.38

GC content: 77.73

Gene sequence:

>750_bases
ATGTGCACCCTCGCCGTCGCGCTGCAGGCGGACCGCCGCTGGCCGGTGATCGTGGCCGCCAACCGCGACGAGCGGAACGG
GCGCCCGTCGGAGGGCTGGGGCCTGCGCGACGGCGCGACCGGCATCCGCTACGCGGCGCCGCGCGACCTCCTCGCCGGCG
GCACCTGGATCGGCCTCTCGGCGCGCGGCGTGTTCGCGGGCGTGACCAACTACCACGCGCCGGTGCAGTGGTACCCCGAC
CCGGAGCGCCGCTCGCGGGGCGACCTCGTCCCGCTCGCGCTCGCCGCCCCGGACGCGGAGGCCGCGCGCGCGGCCTTCGA
GCGGGCGGACGCGGCGCAGTGGAATCCGTTCCACCTCGTGGTCGCCGACGCGCGCGCCGCGTTCCTCTGGTGGTACGACG
GCGAGGCCTCGGGGATCGAGCCGCTCGGCCCCGGCCTGCACGTGGTCACCGAGACCTCGCCGCATGGGCGCGGCCCGCGC
CCCGACCTGGTGCGCGCGCACTGGCCGCTCGAGCCCTCGGTGCCCCGCCTGCGAGAGGTGCTGACCCAGCACGCGGCGGT
GCCCGGCACCGGCACCGCGCTCGCCACCTGCATCCACATGGACCCGGACTACGGCACCCGCTCGTCGGCGCTGGTGCGCC
TCGCGCCCGAGCTGGACCGCTCGGAGCTGTACGCGACCGACGCGCGCCCCTGCCTCGGACCGTACCAGGACCGGGCCGAC
CTGGTCGCCGCGCTGGCGCGGTCGGCTTGA

Upstream 100 bases:

>100_bases
CGCCGCGCGAGACGTTCCGGGGGCCCGGCCGGCGACGGTCGGGCCCCTTCCCGTCGCGCCGGGCGAGCGGGACCGCCGGC
CCCGTGTTAAGCGTCCGGGC

Downstream 100 bases:

>100_bases
CAGCGCGCCCGCCGGGCGCCATCCAAGGAACCGCCATGGGACTCCTCGATCGGATCACCTTCCAGAAGCAGACGGCCGAG
CCCCCCGAGTCGATCGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MCTLAVALQADRRWPVIVAANRDERNGRPSEGWGLRDGATGIRYAAPRDLLAGGTWIGLSARGVFAGVTNYHAPVQWYPD
PERRSRGDLVPLALAAPDAEAARAAFERADAAQWNPFHLVVADARAAFLWWYDGEASGIEPLGPGLHVVTETSPHGRGPR
PDLVRAHWPLEPSVPRLREVLTQHAAVPGTGTALATCIHMDPDYGTRSSALVRLAPELDRSELYATDARPCLGPYQDRAD
LVAALARSA

Sequences:

>Translated_249_residues
MCTLAVALQADRRWPVIVAANRDERNGRPSEGWGLRDGATGIRYAAPRDLLAGGTWIGLSARGVFAGVTNYHAPVQWYPD
PERRSRGDLVPLALAAPDAEAARAAFERADAAQWNPFHLVVADARAAFLWWYDGEASGIEPLGPGLHVVTETSPHGRGPR
PDLVRAHWPLEPSVPRLREVLTQHAAVPGTGTALATCIHMDPDYGTRSSALVRLAPELDRSELYATDARPCLGPYQDRAD
LVAALARSA
>Mature_249_residues
MCTLAVALQADRRWPVIVAANRDERNGRPSEGWGLRDGATGIRYAAPRDLLAGGTWIGLSARGVFAGVTNYHAPVQWYPD
PERRSRGDLVPLALAAPDAEAARAAFERADAAQWNPFHLVVADARAAFLWWYDGEASGIEPLGPGLHVVTETSPHGRGPR
PDLVRAHWPLEPSVPRLREVLTQHAAVPGTGTALATCIHMDPDYGTRSSALVRLAPELDRSELYATDARPCLGPYQDRAD
LVAALARSA

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26918; Mature: 26918

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTLAVALQADRRWPVIVAANRDERNGRPSEGWGLRDGATGIRYAAPRDLLAGGTWIGLS
CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCEEEEEE
ARGVFAGVTNYHAPVQWYPDPERRSRGDLVPLALAAPDAEAARAAFERADAAQWNPFHLV
CCEEEEECCCCCCCEEECCCHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEE
VADARAAFLWWYDGEASGIEPLGPGLHVVTETSPHGRGPRPDLVRAHWPLEPSVPRLREV
EECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHH
LTQHAAVPGTGTALATCIHMDPDYGTRSSALVRLAPELDRSELYATDARPCLGPYQDRAD
HHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCHHEEECCCCCCCCCCCHHHH
LVAALARSA
HHHHHHHCC
>Mature Secondary Structure
MCTLAVALQADRRWPVIVAANRDERNGRPSEGWGLRDGATGIRYAAPRDLLAGGTWIGLS
CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCEEEEEE
ARGVFAGVTNYHAPVQWYPDPERRSRGDLVPLALAAPDAEAARAAFERADAAQWNPFHLV
CCEEEEECCCCCCCEEECCCHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEE
VADARAAFLWWYDGEASGIEPLGPGLHVVTETSPHGRGPRPDLVRAHWPLEPSVPRLREV
EECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHH
LTQHAAVPGTGTALATCIHMDPDYGTRSSALVRLAPELDRSELYATDARPCLGPYQDRAD
HHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCHHEEECCCCCCCCCCCHHHH
LVAALARSA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA