| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is cinA [C]
Identifier: 220918840
GI number: 220918840
Start: 4169796
End: 4171022
Strand: Direct
Name: cinA [C]
Synonym: A2cp1_3752
Alternate gene names: 220918840
Gene position: 4169796-4171022 (Clockwise)
Preceding gene: 220918839
Following gene: 220918842
Centisome position: 82.91
GC content: 76.45
Gene sequence:
>1227_bases ATGCAGGTGGAGATCCTCGCGACCGGCGACGAGCTGCTCACCGGCCAGGTGGTGGACACGAACTCCCCGTGGCTGATGGA CCGGCTGTGGGACCTCGGCCTCATGGTGCGGCGCAAGACGCTGGTGGCCGACGACCGCGACGACCTGCGCGCCGCCATCC TCGAGACCACCGCGCGCGCCGACCTCGTCGTCATGAGCGGCGGGATGGGCCCGACCGAGGACGACCTCACCTCGGAGTGC GTCGCGGCGGTCCTGGGCGTGCCGCTGGAGCGCCACGAGCCGTCGATCGAGGTGCTGCGCGAGCGCTTCCGCAAGTTCGG GCGCGCGCTCACGCCGAACAACGAGAAGCAGGCCTGGTTCCCGCGCGGCGCGGAGGTGATCCCGAACCGCTGGGGCAGCG CGCCGGGGTTCACGGTGCCGGTGGGGCGCGGGCGGGTGGTGTGCCTGCCCGGCGTGCCGGTGGAGTACCGGGGCCTGTGC GAGGAGTGGGTGCTGCCGCACGTCGGCGCCCGGCTGAGCGAGGTGCCCGCGGCGGGCCTGGTGAAGCTGTTCGCCGTGCC CGAGTCGCACGCCGACCACGCCATGCGCCCGGTGATGGACGACCCGGCCAACGCCGGCGTCCGCTTCGGCTACCGCGCCC ACTGGCCCGAGACCCACGTGAAGTGGACCGTGCCCGGTCCCGACGCGGCGGGCCGCGCGGCGCGCATCCGCGAGCGGGTG CTCGGGATCTTCGGCGAGCAGGTGTTCGGCGAGGGCAAGGACGAGCTGCCGGATCTGGTGGTGGCGCGCCTCGCCGCGCG CGGCGAGCGGGTGGCGCTGGGCGAGTCCTGCACCGGCGGGATGGTGGCCGAGCTCCTCACCGCGGTGCCGGGCGCCTCGG CGGTGCTCGACCTCGGGGTGGTCGCCTACGCGAACGCGGCCAAGGAGCGGGTGCTGGGCGTGCCGGCGGAGCTGCTCGCG GCGCACGGCGCCGTGTCGGAGCCGGTGGCGAGGGCGCTCGCCGAGGGCGCGCGCCGGGCCGGCGGCGCAGCCTGGGGCGT CGGCATCACCGGCATCGCGGGGCCGAGCGGCGGCACGCCGGAGAAGCCGGTGGGCACCGTGCACCTCGCGGTGGCGGGCC CGTCGGGCACCGAGACCGTCGCGCGCGCCTACCGCGGCGACCGCGACCGCGTGCGGCGCCAGGCCGCCTACGAGGCGCTC AACCTGCTGCGGCTCGCGCTGCGCTGA
Upstream 100 bases:
>100_bases TGTTCGCCTGGTGCACGCTGCAGTTCGTGCAGCTCGCGCTGCGGCTCCTCGCCGGCTGCGGGACCGTGTTCCACTGGTGG TGCGTGGAGGTGGGGTCGTG
Downstream 100 bases:
>100_bases GCGACGGGCGCGTCACGCCGCCGGCGGGGCGGCGGGCTCGAGGCAGAACGCCTCGACGAAGCGATCCCAGGTGACCTGCG CGGCGCCGCTCGCCATCAGC
Product: competence/damage-inducible protein CinA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MQVEILATGDELLTGQVVDTNSPWLMDRLWDLGLMVRRKTLVADDRDDLRAAILETTARADLVVMSGGMGPTEDDLTSEC VAAVLGVPLERHEPSIEVLRERFRKFGRALTPNNEKQAWFPRGAEVIPNRWGSAPGFTVPVGRGRVVCLPGVPVEYRGLC EEWVLPHVGARLSEVPAAGLVKLFAVPESHADHAMRPVMDDPANAGVRFGYRAHWPETHVKWTVPGPDAAGRAARIRERV LGIFGEQVFGEGKDELPDLVVARLAARGERVALGESCTGGMVAELLTAVPGASAVLDLGVVAYANAAKERVLGVPAELLA AHGAVSEPVARALAEGARRAGGAAWGVGITGIAGPSGGTPEKPVGTVHLAVAGPSGTETVARAYRGDRDRVRRQAAYEAL NLLRLALR
Sequences:
>Translated_408_residues MQVEILATGDELLTGQVVDTNSPWLMDRLWDLGLMVRRKTLVADDRDDLRAAILETTARADLVVMSGGMGPTEDDLTSEC VAAVLGVPLERHEPSIEVLRERFRKFGRALTPNNEKQAWFPRGAEVIPNRWGSAPGFTVPVGRGRVVCLPGVPVEYRGLC EEWVLPHVGARLSEVPAAGLVKLFAVPESHADHAMRPVMDDPANAGVRFGYRAHWPETHVKWTVPGPDAAGRAARIRERV LGIFGEQVFGEGKDELPDLVVARLAARGERVALGESCTGGMVAELLTAVPGASAVLDLGVVAYANAAKERVLGVPAELLA AHGAVSEPVARALAEGARRAGGAAWGVGITGIAGPSGGTPEKPVGTVHLAVAGPSGTETVARAYRGDRDRVRRQAAYEAL NLLRLALR >Mature_408_residues MQVEILATGDELLTGQVVDTNSPWLMDRLWDLGLMVRRKTLVADDRDDLRAAILETTARADLVVMSGGMGPTEDDLTSEC VAAVLGVPLERHEPSIEVLRERFRKFGRALTPNNEKQAWFPRGAEVIPNRWGSAPGFTVPVGRGRVVCLPGVPVEYRGLC EEWVLPHVGARLSEVPAAGLVKLFAVPESHADHAMRPVMDDPANAGVRFGYRAHWPETHVKWTVPGPDAAGRAARIRERV LGIFGEQVFGEGKDELPDLVVARLAARGERVALGESCTGGMVAELLTAVPGASAVLDLGVVAYANAAKERVLGVPAELLA AHGAVSEPVARALAEGARRAGGAAWGVGITGIAGPSGGTPEKPVGTVHLAVAGPSGTETVARAYRGDRDRVRRQAAYEAL NLLRLALR
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Escherichia coli, GI1788583, Length=289, Percent_Identity=34.6020761245675, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789052, Length=151, Percent_Identity=50.3311258278146, Blast_Score=128, Evalue=7e-31, Organism=Escherichia coli, GI1787818, Length=138, Percent_Identity=34.0579710144928, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323832, Length=221, Percent_Identity=24.8868778280543, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_ANAD2 (B8J6V6)
Other databases:
- EMBL: CP001359 - RefSeq: YP_002494144.1 - ProteinModelPortal: B8J6V6 - SMR: B8J6V6 - GeneID: 7296125 - GenomeReviews: CP001359_GR - KEGG: acp:A2cp1_3752 - HOGENOM: HBG449871 - ProtClustDB: CLSK946768 - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 43389; Mature: 43389
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVEILATGDELLTGQVVDTNSPWLMDRLWDLGLMVRRKTLVADDRDDLRAAILETTARA CEEEEEECCCCCEECEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC DLVVMSGGMGPTEDDLTSECVAAVLGVPLERHEPSIEVLRERFRKFGRALTPNNEKQAWF CEEEEECCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC PRGAEVIPNRWGSAPGFTVPVGRGRVVCLPGVPVEYRGLCEEWVLPHVGARLSEVPAAGL CCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHHH VKLFAVPESHADHAMRPVMDDPANAGVRFGYRAHWPETHVKWTVPGPDAAGRAARIRERV EEEEECCCCHHHHHHCCCCCCCCCCCEECCEEECCCCCCEEEEECCCCCCCHHHHHHHHH LGIFGEQVFGEGKDELPDLVVARLAARGERVALGESCTGGMVAELLTAVPGASAVLDLGV HHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHH VAYANAAKERVLGVPAELLAAHGAVSEPVARALAEGARRAGGAAWGVGITGIAGPSGGTP HHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC EKPVGTVHLAVAGPSGTETVARAYRGDRDRVRRQAAYEALNLLRLALR CCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQVEILATGDELLTGQVVDTNSPWLMDRLWDLGLMVRRKTLVADDRDDLRAAILETTARA CEEEEEECCCCCEECEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC DLVVMSGGMGPTEDDLTSECVAAVLGVPLERHEPSIEVLRERFRKFGRALTPNNEKQAWF CEEEEECCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC PRGAEVIPNRWGSAPGFTVPVGRGRVVCLPGVPVEYRGLCEEWVLPHVGARLSEVPAAGL CCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHHH VKLFAVPESHADHAMRPVMDDPANAGVRFGYRAHWPETHVKWTVPGPDAAGRAARIRERV EEEEECCCCHHHHHHCCCCCCCCCCCEECCEEECCCCCCEEEEECCCCCCCHHHHHHHHH LGIFGEQVFGEGKDELPDLVVARLAARGERVALGESCTGGMVAELLTAVPGASAVLDLGV HHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHH VAYANAAKERVLGVPAELLAAHGAVSEPVARALAEGARRAGGAAWGVGITGIAGPSGGTP HHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC EKPVGTVHLAVAGPSGTETVARAYRGDRDRVRRQAAYEALNLLRLALR CCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA