Click here to switch to the map view.

The map label for this gene is 220918836

Identifier: 220918836

GI number: 220918836

Start: 4164865

End: 4166256

Strand: Direct

Name: 220918836

Synonym: A2cp1_3748

Alternate gene names: NA

Gene position: 4164865-4166256 (Clockwise)

Preceding gene: 220918833

Following gene: 220918838

Centisome position: 82.81

GC content: 65.37

Gene sequence:

>1392_bases
ATGTACGTCAACTTCACCTTCCAAAACTGGAGCCCGTCATGCGCCGCGGGCTCGATGAGGCGGTATTGCATCGAGGCGAT
CGGCGTGCATGAGTTCGGCCACGCTCTCGGCTTTTCACACGAGCAGAACCGGCCCGACACGCCGCGCGATATCTGCACGG
ATGCTCCCCAGGGTACGAACGGGGACACTCTCGTCGGCGCCTGGGACCTAGAATCCGTGATGAACTACTGCAATCCGAAC
TGGAACAACGGGGGCGTCCTCAGCGCGACAGACATCTTCGGACTGAGGATCTTCTACGGGCCGCCGAACCAGCTGTCGCG
CGAGGCATGGGCAAGGGCCTCCGGAGGATTCTGGAACGCGCAGAAGTGGCTCGCGGGCGACTTCAACGGCGACGGACGCG
CCGACCTCGCGAACGTGTTCAACGACGGGGGCTACTCCACCGTGGACGTGCATCTGTCCACGGGCAACGGATTTGTGCAG
ACGATCTGGGCGACGCGCTCGGGCGGCTTCTGGGACGCGCAGAAGTGGCTCGCGGGCGACTTCAACGGCGACGGACGCAC
CGACCTCGCGAACGTGTTCTACGACGGAGGATACTCCACCGTGGACGTGCACGTGTCCACGGGCAGCGGATTTGTGCGGA
CGCGCTGGGCGACGCGCTCGGGCGCCTTCTGGGACGCGCAGAAGTGGCTCGCGGGTGACTTTAACGGCGACGGACGCACC
GACCTCGCGAACGTGTTCAACGACGGGGGATACTCCACCGTGGACGTGCATGTGTCCACGGGCAGCGCGTTCGTGCGGAG
GGTCTGGGCGACGCGCTCGGGCGACTTCTGGGACGCTCAGAAGTGGCTCGCGGGCGATTTCGACGGCGACGGACGCGCCG
ACCTCGCGAACGTGTTCAATGACGGGGGTCTCATGTCCGCCGATGTTCACGTGTCGACGGGCATCAGCTTCGAGCGGCAG
GCGTGGGTCAGGCGCTCCTACCAGTTCTGGGACGCGCAGAAGTGGATGGCAGCCGACCTGAGTGGCGACGGTCGGGCGGA
CCTCGTCAACGTGTTCAGCGACGGGGATCTCATGTCCGCCGACGTGAACGTCTCGTCCGGGGCCGGGTTCCGCCGCGAGC
GGTGGGCGACGCGGTCCTACGGGTTCTCAGATGCGCAGAAGTGGATGGCGGCGGACTTCAGCGGCGATGGCCGAGCGGAC
CTGGCGAACGTCTTCAACGATGCAGGAAACATGTCTTCGGATATCCACGTCGCCGAGTGTCCGAGCGGGTGGCAACAGTG
CTCAACAGCGAGCGGCAGCTGCGTCGACATGCAGCACGACGCCGCGAACTGTGGTTCGTGCGCGAACACGTGCGCGAGCG
GTCTGACGTGCAATCACGGCAGTTGCGGGTGA

Upstream 100 bases:

>100_bases
GTTTCAGCGAGGAATTCGGATCGCGATCTCCGACGAACAACCGCACACGATAGGCCTGGGGACGGACATTGACAGTGCAT
GGATGTATTCAAGTCCAGGA

Downstream 100 bases:

>100_bases
GCTCTCCTGCTCATCTCCAGACGGTAGGGATCAGTATTGAAGCCCAGCGGACTTCCCAGGTCCGCTGGGCTTCGCCGTTT
GCGGATGCGCGTCGCGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Integrin-Like Protein; Peptidase M; Peptidase S8 And S; YD Repeat Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Fg-Gap Repeat Protein; YD Repeat-Containing Protein; FG-GAP Repeat-Containing Protein; ATPase; Rhs Family Protein; Peptidase; FG-GAP Repeat Protein

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MYVNFTFQNWSPSCAAGSMRRYCIEAIGVHEFGHALGFSHEQNRPDTPRDICTDAPQGTNGDTLVGAWDLESVMNYCNPN
WNNGGVLSATDIFGLRIFYGPPNQLSREAWARASGGFWNAQKWLAGDFNGDGRADLANVFNDGGYSTVDVHLSTGNGFVQ
TIWATRSGGFWDAQKWLAGDFNGDGRTDLANVFYDGGYSTVDVHVSTGSGFVRTRWATRSGAFWDAQKWLAGDFNGDGRT
DLANVFNDGGYSTVDVHVSTGSAFVRRVWATRSGDFWDAQKWLAGDFDGDGRADLANVFNDGGLMSADVHVSTGISFERQ
AWVRRSYQFWDAQKWMAADLSGDGRADLVNVFSDGDLMSADVNVSSGAGFRRERWATRSYGFSDAQKWMAADFSGDGRAD
LANVFNDAGNMSSDIHVAECPSGWQQCSTASGSCVDMQHDAANCGSCANTCASGLTCNHGSCG

Sequences:

>Translated_463_residues
MYVNFTFQNWSPSCAAGSMRRYCIEAIGVHEFGHALGFSHEQNRPDTPRDICTDAPQGTNGDTLVGAWDLESVMNYCNPN
WNNGGVLSATDIFGLRIFYGPPNQLSREAWARASGGFWNAQKWLAGDFNGDGRADLANVFNDGGYSTVDVHLSTGNGFVQ
TIWATRSGGFWDAQKWLAGDFNGDGRTDLANVFYDGGYSTVDVHVSTGSGFVRTRWATRSGAFWDAQKWLAGDFNGDGRT
DLANVFNDGGYSTVDVHVSTGSAFVRRVWATRSGDFWDAQKWLAGDFDGDGRADLANVFNDGGLMSADVHVSTGISFERQ
AWVRRSYQFWDAQKWMAADLSGDGRADLVNVFSDGDLMSADVNVSSGAGFRRERWATRSYGFSDAQKWMAADFSGDGRAD
LANVFNDAGNMSSDIHVAECPSGWQQCSTASGSCVDMQHDAANCGSCANTCASGLTCNHGSCG
>Mature_463_residues
MYVNFTFQNWSPSCAAGSMRRYCIEAIGVHEFGHALGFSHEQNRPDTPRDICTDAPQGTNGDTLVGAWDLESVMNYCNPN
WNNGGVLSATDIFGLRIFYGPPNQLSREAWARASGGFWNAQKWLAGDFNGDGRADLANVFNDGGYSTVDVHLSTGNGFVQ
TIWATRSGGFWDAQKWLAGDFNGDGRTDLANVFYDGGYSTVDVHVSTGSGFVRTRWATRSGAFWDAQKWLAGDFNGDGRT
DLANVFNDGGYSTVDVHVSTGSAFVRRVWATRSGDFWDAQKWLAGDFDGDGRADLANVFNDGGLMSADVHVSTGISFERQ
AWVRRSYQFWDAQKWMAADLSGDGRADLVNVFSDGDLMSADVNVSSGAGFRRERWATRSYGFSDAQKWMAADFSGDGRAD
LANVFNDAGNMSSDIHVAECPSGWQQCSTASGSCVDMQHDAANCGSCANTCASGLTCNHGSCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50162; Mature: 50162

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVNFTFQNWSPSCAAGSMRRYCIEAIGVHEFGHALGFSHEQNRPDTPRDICTDAPQGTN
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC
GDTLVGAWDLESVMNYCNPNWNNGGVLSATDIFGLRIFYGPPNQLSREAWARASGGFWNA
CCEEEEEECHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCC
QKWLAGDFNGDGRADLANVFNDGGYSTVDVHLSTGNGFVQTIWATRSGGFWDAQKWLAGD
CHHEECCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHCCC
FNGDGRTDLANVFYDGGYSTVDVHVSTGSGFVRTRWATRSGAFWDAQKWLAGDFNGDGRT
CCCCCCCCHHHEEECCCCEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCH
DLANVFNDGGYSTVDVHVSTGSAFVRRVWATRSGDFWDAQKWLAGDFDGDGRADLANVFN
HHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHC
DGGLMSADVHVSTGISFERQAWVRRSYQFWDAQKWMAADLSGDGRADLVNVFSDGDLMSA
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCEEEE
DVNVSSGAGFRRERWATRSYGFSDAQKWMAADFSGDGRADLANVFNDAGNMSSDIHVAEC
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCEEEEEC
PSGWQQCSTASGSCVDMQHDAANCGSCANTCASGLTCNHGSCG
CCHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYVNFTFQNWSPSCAAGSMRRYCIEAIGVHEFGHALGFSHEQNRPDTPRDICTDAPQGTN
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC
GDTLVGAWDLESVMNYCNPNWNNGGVLSATDIFGLRIFYGPPNQLSREAWARASGGFWNA
CCEEEEEECHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCC
QKWLAGDFNGDGRADLANVFNDGGYSTVDVHLSTGNGFVQTIWATRSGGFWDAQKWLAGD
CHHEECCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHCCC
FNGDGRTDLANVFYDGGYSTVDVHVSTGSGFVRTRWATRSGAFWDAQKWLAGDFNGDGRT
CCCCCCCCHHHEEECCCCEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCH
DLANVFNDGGYSTVDVHVSTGSAFVRRVWATRSGDFWDAQKWLAGDFDGDGRADLANVFN
HHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHC
DGGLMSADVHVSTGISFERQAWVRRSYQFWDAQKWMAADLSGDGRADLVNVFSDGDLMSA
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCEEEE
DVNVSSGAGFRRERWATRSYGFSDAQKWMAADFSGDGRADLANVFNDAGNMSSDIHVAEC
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCEEEEEC
PSGWQQCSTASGSCVDMQHDAANCGSCANTCASGLTCNHGSCG
CCHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA