| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918660
Identifier: 220918660
GI number: 220918660
Start: 3987894
End: 3989060
Strand: Reverse
Name: 220918660
Synonym: A2cp1_3568
Alternate gene names: NA
Gene position: 3989060-3987894 (Counterclockwise)
Preceding gene: 220918666
Following gene: 220918653
Centisome position: 79.32
GC content: 76.18
Gene sequence:
>1167_bases GTGTCTGGCCTGACCCTGTCCGTCCACGGCTCCATCTCCGAGCTCCGCCCCGAGGACTGGGACGCGCTCCTCGAGCACGA GCCCGAGCGCGCCAGCCCGTTCGCCCGCCACGCGTTCCTGGCCGCGTGCGAGGAGAGCGGCTGCGCCACCCCGCGGACCG GCTGGGCGCCGCGGCACCTGGTGGCCCGGCGCGGCGGCCGGGTGGTGGCGGCCGCGTTCGCCTACGTGCGCGAGAGCTCC GACGGCGACTTCGGGCGCGACTGGGAGTGGGCGGCGGCGGCCGCTCGGGCCCGTCTCCCCTGGTACCCGAAGCTCGTGCT GGGCGTGCCGTTCACGCCCGCCACCGGGCGCCGCTTCCTGGTGGCCGCCGGCGAGAACCGGGCGGCCCTGGTGCGGGCGC TGCTGGAGCGGGCGCGGCGGCTCTGCGCCGAGGAGGGGCTCCACGGGCTGCACGTGCTGTTCCCCGGCGCCGACGAGGCG CGCGAGCTGGAGGAGGCCGGCCTCGCGCTCCGGGTGGACTTCCAGTACCACTGGCGCAACGCCGGGTACGCCGACCCGGA GGCATTCCTGGCGGCGTTCCCCTCCAAGCGCAGGAACGCCATCCGCCGCGAGAAGGCCGCGCCGGAGCGCCAGGGGATCG CCATCCGCACCGTGCGCGGCGACGAGCTGTCGCGGGATCCGGAGGGCTGGGCGCGCGACTGCTTCGCGCTGCACCGCGCC TCGACCGACCAGATGGCCTGGGGCATGCGCTTCGTGAACCGCGCGTTCTACGCGCGGGTGTTCGCCGGGCTGCCCGACGC GGTCGAGGTGGTGGAGGCGCGGAGGGAGGGGCGGCTGGTGGGGATGGCGTTCAACCTCGCCAGCGCCGAGGCGCTGTACG GCCGCTACTGGGGCTGCGTCGAGCAGCACCCGTTCCTGCACTTCAACGTGGCGCTGTACCACTCGATCGACGAGTGCATC CGCCGCGGCGTGCGCCGCTTCGAGGGCGGCGCGGGCGGGGAGCACAAGCTGGCCCGCGGCTTCGAGCCGGCCGAGACCTG GAGCGCGCACCTGCTGCTCGATCGCCGGCTGGACGCGCCCATCCGGCGCCACCTCGAGCTGGAGCGGCCGCAGCGGCTGG AGGCGGTGGCGCGCTGGCGGGAGGAGCACCCGCGGCTCGGCGGGTGA
Upstream 100 bases:
>100_bases GGTTGCGACCCGAGGATCGGGGCGCGGGCGGGCCCTGTCGGGGCGAACCCCGGGGCGTGGCGCATTGCGCCGTCGGCGCC GCGGCGGCTATGAACGGCCG
Downstream 100 bases:
>100_bases GCCCTTCGAGTCCGGCGAGCCTTCGGCTCGCTCGCTCATCCCGACCCTTCGACTCCGGCGAGCCTTCGGCTCGCCTACGC TCAGGGTGAGCGCTGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSGLTLSVHGSISELRPEDWDALLEHEPERASPFARHAFLAACEESGCATPRTGWAPRHLVARRGGRVVAAAFAYVRESS DGDFGRDWEWAAAAARARLPWYPKLVLGVPFTPATGRRFLVAAGENRAALVRALLERARRLCAEEGLHGLHVLFPGADEA RELEEAGLALRVDFQYHWRNAGYADPEAFLAAFPSKRRNAIRREKAAPERQGIAIRTVRGDELSRDPEGWARDCFALHRA STDQMAWGMRFVNRAFYARVFAGLPDAVEVVEARREGRLVGMAFNLASAEALYGRYWGCVEQHPFLHFNVALYHSIDECI RRGVRRFEGGAGGEHKLARGFEPAETWSAHLLLDRRLDAPIRRHLELERPQRLEAVARWREEHPRLGG
Sequences:
>Translated_388_residues MSGLTLSVHGSISELRPEDWDALLEHEPERASPFARHAFLAACEESGCATPRTGWAPRHLVARRGGRVVAAAFAYVRESS DGDFGRDWEWAAAAARARLPWYPKLVLGVPFTPATGRRFLVAAGENRAALVRALLERARRLCAEEGLHGLHVLFPGADEA RELEEAGLALRVDFQYHWRNAGYADPEAFLAAFPSKRRNAIRREKAAPERQGIAIRTVRGDELSRDPEGWARDCFALHRA STDQMAWGMRFVNRAFYARVFAGLPDAVEVVEARREGRLVGMAFNLASAEALYGRYWGCVEQHPFLHFNVALYHSIDECI RRGVRRFEGGAGGEHKLARGFEPAETWSAHLLLDRRLDAPIRRHLELERPQRLEAVARWREEHPRLGG >Mature_387_residues SGLTLSVHGSISELRPEDWDALLEHEPERASPFARHAFLAACEESGCATPRTGWAPRHLVARRGGRVVAAAFAYVRESSD GDFGRDWEWAAAAARARLPWYPKLVLGVPFTPATGRRFLVAAGENRAALVRALLERARRLCAEEGLHGLHVLFPGADEAR ELEEAGLALRVDFQYHWRNAGYADPEAFLAAFPSKRRNAIRREKAAPERQGIAIRTVRGDELSRDPEGWARDCFALHRAS TDQMAWGMRFVNRAFYARVFAGLPDAVEVVEARREGRLVGMAFNLASAEALYGRYWGCVEQHPFLHFNVALYHSIDECIR RGVRRFEGGAGGEHKLARGFEPAETWSAHLLLDRRLDAPIRRHLELERPQRLEAVARWREEHPRLGG
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43679; Mature: 43548
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLTLSVHGSISELRPEDWDALLEHEPERASPFARHAFLAACEESGCATPRTGWAPRHL CCCCEEEECCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH VARRGGRVVAAAFAYVRESSDGDFGRDWEWAAAAARARLPWYPKLVLGVPFTPATGRRFL HHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEE VAAGENRAALVRALLERARRLCAEEGLHGLHVLFPGADEARELEEAGLALRVDFQYHWRN EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEEEEEEECC AGYADPEAFLAAFPSKRRNAIRREKAAPERQGIAIRTVRGDELSRDPEGWARDCFALHRA CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC STDQMAWGMRFVNRAFYARVFAGLPDAVEVVEARREGRLVGMAFNLASAEALYGRYWGCV CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCHH EQHPFLHFNVALYHSIDECIRRGVRRFEGGAGGEHKLARGFEPAETWSAHLLLDRRLDAP CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHH IRRHLELERPQRLEAVARWREEHPRLGG HHHHHCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGLTLSVHGSISELRPEDWDALLEHEPERASPFARHAFLAACEESGCATPRTGWAPRHL CCCEEEECCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH VARRGGRVVAAAFAYVRESSDGDFGRDWEWAAAAARARLPWYPKLVLGVPFTPATGRRFL HHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEE VAAGENRAALVRALLERARRLCAEEGLHGLHVLFPGADEARELEEAGLALRVDFQYHWRN EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEEEEEEECC AGYADPEAFLAAFPSKRRNAIRREKAAPERQGIAIRTVRGDELSRDPEGWARDCFALHRA CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC STDQMAWGMRFVNRAFYARVFAGLPDAVEVVEARREGRLVGMAFNLASAEALYGRYWGCV CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCHH EQHPFLHFNVALYHSIDECIRRGVRRFEGGAGGEHKLARGFEPAETWSAHLLLDRRLDAP CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHH IRRHLELERPQRLEAVARWREEHPRLGG HHHHHCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA