Click here to switch to the map view.

The map label for this gene is modF [H]

Identifier: 220918624

GI number: 220918624

Start: 3948035

End: 3949474

Strand: Direct

Name: modF [H]

Synonym: A2cp1_3532

Alternate gene names: 220918624

Gene position: 3948035-3949474 (Clockwise)

Preceding gene: 220918622

Following gene: 220918625

Centisome position: 78.5

GC content: 80.21

Gene sequence:

>1440_bases
ATGCGCCGGCCGCTCGTCACGCTCGACCGGGTGGACGTCCGCCTGGGCGGGGTCCCCGTCCTCGCCGACGTCACGCTCGC
GCTCCACGCCGGCGAGGGGCTGGCGGTGCTGGGCGGGAACGGCGCGGGGAAGTCCACGCTCCTGCGGGTCCTGCGCGGGG
AGCTGTGGCCGGATCCGCGCGGCGGGCGACGCCTGTTCCACGGGCCCGACGGCGCGTTCGAGAGCCCGATCGGCGCGCGC
GAGCGGTTCGCGCGGGTGGCGCCCGAGGCGCAGGACGCGTACCTGCGCAACGACTGGGACCTGCCGGTCGAGGCGGTGAT
CCGCTCCGGCTTCTTCGACGCGCTGTGGCCCTCCGAGGCGGCGACGCCGGAGCAGGCGCGGCGCGTGCGCGAGGTGGCCG
GCGCGCTGGGCGTGGACGCGCTGCTGGGGCGCTCGGTGCTGGAGCTGTCGCGCGGCGAGGGGCGGCGCGTGCTGCTGGCG
CGCGCGCTCGCGCCGCGGCCGGAGGCGCTGTTCCTCGACGAGGCCTGCGACGGGCTCGACGCGCCGGCGCGGGCCGGGCT
GCTCGAGACCGTGTCGGGCATCGCGCGCGGCGGCGTCGCGGTGGTGATGGCCACGCACCGGGTCGAGGAGCTCGTGCCCG
AGCTGGGCCGCGTCATCCGGCTGGAGGGCGGGCGGATCGCCTGGGAGGGCGACCGCGCCGCCGCCCTGGCGGGCGCGCGC
GAGGCCGCGGCGCCGCGCCGCGCGCCGCGGCGCGACGCCGGCCCGCGCGCGGCGCTCTTCGCGCTCCGCGGCGCCACCGT
GCTCGTGGACGGGCGCGCGGTGCTCGACGGCGTGGACTGGACCGTCGGCGCCGGCGAGCGCTGGTCGGTGACCGGCCCGA
ACGGCGCGGGGAAGTCCACCCTGCTCCGGCTGCTCGCGGGCGAGGAGCAGCCGGCGCGCGGCGCGGTGGAGCGGCTCGGC
CTCGGGCCCCACGCCTCGGCCGACGACCTGCGCGGCCGCGTGGGCCTGGTCTCGCCGGAGCTGCAGGCGCGCCACCGCTT
CGACGCGCGCGCCGGGGACGTGGTGCTCTCCGGCTTCGCGGGCACGGTCGGCCTCGCCGTGGAGCCCACCGCGCGCGAGC
GGGCGCTGGCCGCCGCCGCGGCGGCGCGGCTCGGCGTGACGCCGCTGCTCGAGCGCCACGTGCTGTCGCTCTCCTACGGC
GAGCTGCGCAAGGTGCTCATCGCCCGCGCGCTCGCCTCGGCCCCGCGGGCGCTGCTGCTGGACGAGCCGCTCGCCGGGCT
CGATCCCGGCGCGCGCGCCTGGGTGCTCCGGGTGCTCGACGATCTGGGCGCGGCCGGCACCGCCATCGTGGCCGTGTCCC
ACCACGCCAACGAGCTGCCCGGCGCGGTGGACGGGCGGGCGCGGCTCGAGGCGGGCCGGCTCTCCGTGGATCGCGGCTGA

Upstream 100 bases:

>100_bases
CACCACCGGAGCCTCGGAGCGATCCCGCACGTGATCCAGAACAGGCGTCCGTCCGGCGCATTTCACCCCCTGGCGGGCAC
GTCCGCATTAGCATCCCCGG

Downstream 100 bases:

>100_bases
GGGGGACCGCGGCCGGCGGCGGGCGGGCGCACGGCGCGCCGCCCGGGCGGTGGCGTCGCGGGCGGCCCGGGGGTATCACC
GTCGCGTGCCGCTCGCCCCG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: Photorepair protein PhrA [H]

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MRRPLVTLDRVDVRLGGVPVLADVTLALHAGEGLAVLGGNGAGKSTLLRVLRGELWPDPRGGRRLFHGPDGAFESPIGAR
ERFARVAPEAQDAYLRNDWDLPVEAVIRSGFFDALWPSEAATPEQARRVREVAGALGVDALLGRSVLELSRGEGRRVLLA
RALAPRPEALFLDEACDGLDAPARAGLLETVSGIARGGVAVVMATHRVEELVPELGRVIRLEGGRIAWEGDRAAALAGAR
EAAAPRRAPRRDAGPRAALFALRGATVLVDGRAVLDGVDWTVGAGERWSVTGPNGAGKSTLLRLLAGEEQPARGAVERLG
LGPHASADDLRGRVGLVSPELQARHRFDARAGDVVLSGFAGTVGLAVEPTARERALAAAAAARLGVTPLLERHVLSLSYG
ELRKVLIARALASAPRALLLDEPLAGLDPGARAWVLRVLDDLGAAGTAIVAVSHHANELPGAVDGRARLEAGRLSVDRG

Sequences:

>Translated_479_residues
MRRPLVTLDRVDVRLGGVPVLADVTLALHAGEGLAVLGGNGAGKSTLLRVLRGELWPDPRGGRRLFHGPDGAFESPIGAR
ERFARVAPEAQDAYLRNDWDLPVEAVIRSGFFDALWPSEAATPEQARRVREVAGALGVDALLGRSVLELSRGEGRRVLLA
RALAPRPEALFLDEACDGLDAPARAGLLETVSGIARGGVAVVMATHRVEELVPELGRVIRLEGGRIAWEGDRAAALAGAR
EAAAPRRAPRRDAGPRAALFALRGATVLVDGRAVLDGVDWTVGAGERWSVTGPNGAGKSTLLRLLAGEEQPARGAVERLG
LGPHASADDLRGRVGLVSPELQARHRFDARAGDVVLSGFAGTVGLAVEPTARERALAAAAAARLGVTPLLERHVLSLSYG
ELRKVLIARALASAPRALLLDEPLAGLDPGARAWVLRVLDDLGAAGTAIVAVSHHANELPGAVDGRARLEAGRLSVDRG
>Mature_479_residues
MRRPLVTLDRVDVRLGGVPVLADVTLALHAGEGLAVLGGNGAGKSTLLRVLRGELWPDPRGGRRLFHGPDGAFESPIGAR
ERFARVAPEAQDAYLRNDWDLPVEAVIRSGFFDALWPSEAATPEQARRVREVAGALGVDALLGRSVLELSRGEGRRVLLA
RALAPRPEALFLDEACDGLDAPARAGLLETVSGIARGGVAVVMATHRVEELVPELGRVIRLEGGRIAWEGDRAAALAGAR
EAAAPRRAPRRDAGPRAALFALRGATVLVDGRAVLDGVDWTVGAGERWSVTGPNGAGKSTLLRLLAGEEQPARGAVERLG
LGPHASADDLRGRVGLVSPELQARHRFDARAGDVVLSGFAGTVGLAVEPTARERALAAAAAARLGVTPLLERHVLSLSYG
ELRKVLIARALASAPRALLLDEPLAGLDPGARAWVLRVLDDLGAAGTAIVAVSHHANELPGAVDGRARLEAGRLSVDRG

Specific function: Involved in the transport of molybdenum into the cell. Involved in photorepair. Could act on UV-induced DNA damage other than pyrimidine dimers [H]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI42490749, Length=242, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI171184400, Length=228, Percent_Identity=30.2631578947368, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1786975, Length=476, Percent_Identity=31.7226890756302, Blast_Score=191, Evalue=9e-50,
Organism=Escherichia coli, GI1788472, Length=477, Percent_Identity=23.6897274633124, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1790190, Length=507, Percent_Identity=26.6272189349112, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788897, Length=487, Percent_Identity=26.8993839835729, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1790525, Length=507, Percent_Identity=23.6686390532544, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=32.1888412017167, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI48994943, Length=492, Percent_Identity=23.9837398373984, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787792, Length=502, Percent_Identity=25.0996015936255, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788210, Length=487, Percent_Identity=24.0246406570842, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787029, Length=187, Percent_Identity=34.2245989304813, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI48995001, Length=485, Percent_Identity=24.5360824742268, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787089, Length=239, Percent_Identity=28.8702928870293, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=31.1926605504587, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788165, Length=227, Percent_Identity=32.15859030837, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789873, Length=194, Percent_Identity=30.4123711340206, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786253, Length=221, Percent_Identity=30.316742081448, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786698, Length=223, Percent_Identity=28.6995515695067, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=27.1929824561404, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789991, Length=235, Percent_Identity=27.2340425531915, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=27.3913043478261, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1786398, Length=205, Percent_Identity=27.8048780487805, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787112, Length=221, Percent_Identity=31.6742081447964, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788002, Length=220, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081782, Length=197, Percent_Identity=29.9492385786802, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081834, Length=235, Percent_Identity=29.3617021276596, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786345, Length=222, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789891, Length=211, Percent_Identity=31.7535545023697, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1789593, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789962, Length=210, Percent_Identity=30, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=31.7708333333333, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=219, Percent_Identity=31.5068493150685, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786872, Length=171, Percent_Identity=30.9941520467836, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1790544, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1789864, Length=224, Percent_Identity=26.3392857142857, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082268, Length=249, Percent_Identity=26.5060240963855, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI2367384, Length=211, Percent_Identity=28.9099526066351, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=206, Percent_Identity=30.0970873786408, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71992285, Length=229, Percent_Identity=29.2576419213974, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=231, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=228, Percent_Identity=27.6315789473684, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=262, Percent_Identity=25.9541984732824, Blast_Score=65, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323959, Length=233, Percent_Identity=30.4721030042918, Blast_Score=76, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24643674, Length=173, Percent_Identity=28.9017341040462, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397593, Length=233, Percent_Identity=30.0429184549356, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85726357, Length=244, Percent_Identity=25.8196721311475, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 50175; Mature: 50175

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPLVTLDRVDVRLGGVPVLADVTLALHAGEGLAVLGGNGAGKSTLLRVLRGELWPDPR
CCCCCEEHEEEEEEECCEEEEEHEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC
GGRRLFHGPDGAFESPIGARERFARVAPEAQDAYLRNDWDLPVEAVIRSGFFDALWPSEA
CCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHCCCHHHCCCCCC
ATPEQARRVREVAGALGVDALLGRSVLELSRGEGRRVLLARALAPRPEALFLDEACDGLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCEEEHHHHCCCCC
APARAGLLETVSGIARGGVAVVMATHRVEELVPELGRVIRLEGGRIAWEGDRAAALAGAR
CHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHCCH
EAAAPRRAPRRDAGPRAALFALRGATVLVDGRAVLDGVDWTVGAGERWSVTGPNGAGKST
HHCCCCCCCCCCCCCHHHHHEECCCEEEECCHHEECCCCEEECCCCEEEECCCCCCCHHH
LLRLLAGEEQPARGAVERLGLGPHASADDLRGRVGLVSPELQARHRFDARAGDVVLSGFA
HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEECCC
GTVGLAVEPTARERALAAAAAARLGVTPLLERHVLSLSYGELRKVLIARALASAPRALLL
CCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEE
DEPLAGLDPGARAWVLRVLDDLGAAGTAIVAVSHHANELPGAVDGRARLEAGRLSVDRG
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHEECCCEECCCC
>Mature Secondary Structure
MRRPLVTLDRVDVRLGGVPVLADVTLALHAGEGLAVLGGNGAGKSTLLRVLRGELWPDPR
CCCCCEEHEEEEEEECCEEEEEHEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC
GGRRLFHGPDGAFESPIGARERFARVAPEAQDAYLRNDWDLPVEAVIRSGFFDALWPSEA
CCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHCCCHHHCCCCCC
ATPEQARRVREVAGALGVDALLGRSVLELSRGEGRRVLLARALAPRPEALFLDEACDGLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCEEEHHHHCCCCC
APARAGLLETVSGIARGGVAVVMATHRVEELVPELGRVIRLEGGRIAWEGDRAAALAGAR
CHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHCCH
EAAAPRRAPRRDAGPRAALFALRGATVLVDGRAVLDGVDWTVGAGERWSVTGPNGAGKST
HHCCCCCCCCCCCCCHHHHHEECCCEEEECCHHEECCCCEEECCCCEEEECCCCCCCHHH
LLRLLAGEEQPARGAVERLGLGPHASADDLRGRVGLVSPELQARHRFDARAGDVVLSGFA
HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEECCC
GTVGLAVEPTARERALAAAAAARLGVTPLLERHVLSLSYGELRKVLIARALASAPRALLL
CCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEE
DEPLAGLDPGARAWVLRVLDDLGAAGTAIVAVSHHANELPGAVDGRARLEAGRLSVDRG
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHEECCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8564363; 8550508; 8905232; 9278503; 8310005 [H]