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The map label for this gene is yebA [C]

Identifier: 220918625

GI number: 220918625

Start: 3949560

End: 3950525

Strand: Direct

Name: yebA [C]

Synonym: A2cp1_3533

Alternate gene names: 220918625

Gene position: 3949560-3950525 (Clockwise)

Preceding gene: 220918624

Following gene: 220918627

Centisome position: 78.53

GC content: 80.54

Gene sequence:

>966_bases
GTGCCGCTCGCCCCGCTCCTCGCCCTGCTCGCCGCCGCCGCCCCGTCCCTGACCCTCGCGCCCGAGGCGGCGCGCCCCGG
CGACGCGGTGCTGGTGCGGGTCGCGGGCACCGGGCGGGAGGCGCCGCGCGGCACGCTGGGCGGACGCCCGCTCACGTTCT
GGCGCGCCGGCGCGGAGTGGCGCGCGCTGGCGGCGCTCCCCATCGAGACGCCGGCCGGCGAGCTCCCCGCGGAGGCCGAG
GCCGGCGGCGCCGCGCTGCGGGCCACGCTGCGGATCGTCGAGCCCAGATTCGCGTCGCGCGCGCTCACGCTCGCGCCGAA
GTACGTGGAGCCGCCCGAGGCGGTGAAGGCCCGCATCGCGGCCGACCGCAAGGCGTTCGCGGACGCCTACGCGCGCCCGT
TCGAGCCGCCCGCGTTCGCGCGGCCGTTCGCGCTGCCCCGTCGCGCGCCCACCTCGGGCCGCTACGGCGACCAGCGGGTG
CTGAACGGCGAGAAGCCGAGCGTGCACTACGGGCTCGACCTGACCGGCCCGCGCGGCGCGCCGGTGGCGGCCGCGAATGC
CGGGCGGGTGGTGCTGGTGCGCGACGCCTACCTGTCCGGCCGGAGCGTGGTGCTGTGGCACGGGGCGGGCATCTACACGC
TCTACTTCCACCTCGACCGCGTGGACGTGCGCGCCGGCCAGGTGGTGCGGCGCGGTCAGCGCATCGGGCGGCTCGGCTCG
ACCGGCCGCTCCACCGGCCCGCACCTGCACTGGAGCGTGCGGGTGGACGGGCTGCTCGTGGATCCGGAGTCGCTGGTCGC
CATCGACTTCGCGCGGGGCGTCGCGCCCGCCCGCGCGCCGGCGCCCGCACCCGCGGTCGCCTCCCCGGCCGCCGTCCCGA
CCCCGACGCCGGCCCCGGCCGCCGTCGCCGCGCCGGCGACCCCGATCGCGCCCGCCGCCGCCGGCACGCCCGCCGCGCAG
CCCTGA

Upstream 100 bases:

>100_bases
GTGGATCGCGGCTGAGGGGGACCGCGGCCGGCGGCGGGCGGGCGCACGGCGCGCCGCCCGGGCGGTGGCGTCGCGGGCGG
CCCGGGGGTATCACCGTCGC

Downstream 100 bases:

>100_bases
CCCGCTAGCCCTCGCGCCGGATGACCTCCAGCATCGGCGCGTGGAGCGCCGGCGCCGCGGCCAGGATGTCGCCGGTCTCC
AGCATCCGGTCGCCGCCGTC

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPLAPLLALLAAAAPSLTLAPEAARPGDAVLVRVAGTGREAPRGTLGGRPLTFWRAGAEWRALAALPIETPAGELPAEAE
AGGAALRATLRIVEPRFASRALTLAPKYVEPPEAVKARIAADRKAFADAYARPFEPPAFARPFALPRRAPTSGRYGDQRV
LNGEKPSVHYGLDLTGPRGAPVAAANAGRVVLVRDAYLSGRSVVLWHGAGIYTLYFHLDRVDVRAGQVVRRGQRIGRLGS
TGRSTGPHLHWSVRVDGLLVDPESLVAIDFARGVAPARAPAPAPAVASPAAVPTPTPAPAAVAAPATPIAPAAAGTPAAQ
P

Sequences:

>Translated_321_residues
MPLAPLLALLAAAAPSLTLAPEAARPGDAVLVRVAGTGREAPRGTLGGRPLTFWRAGAEWRALAALPIETPAGELPAEAE
AGGAALRATLRIVEPRFASRALTLAPKYVEPPEAVKARIAADRKAFADAYARPFEPPAFARPFALPRRAPTSGRYGDQRV
LNGEKPSVHYGLDLTGPRGAPVAAANAGRVVLVRDAYLSGRSVVLWHGAGIYTLYFHLDRVDVRAGQVVRRGQRIGRLGS
TGRSTGPHLHWSVRVDGLLVDPESLVAIDFARGVAPARAPAPAPAVASPAAVPTPTPAPAAVAAPATPIAPAAAGTPAAQ
P
>Mature_320_residues
PLAPLLALLAAAAPSLTLAPEAARPGDAVLVRVAGTGREAPRGTLGGRPLTFWRAGAEWRALAALPIETPAGELPAEAEA
GGAALRATLRIVEPRFASRALTLAPKYVEPPEAVKARIAADRKAFADAYARPFEPPAFARPFALPRRAPTSGRYGDQRVL
NGEKPSVHYGLDLTGPRGAPVAAANAGRVVLVRDAYLSGRSVVLWHGAGIYTLYFHLDRVDVRAGQVVRRGQRIGRLGST
GRSTGPHLHWSVRVDGLLVDPESLVAIDFARGVAPARAPAPAPAVASPAAVPTPTPAPAAVAAPATPIAPAAAGTPAAQP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=94, Percent_Identity=42.5531914893617, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33122; Mature: 32991

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLAPLLALLAAAAPSLTLAPEAARPGDAVLVRVAGTGREAPRGTLGGRPLTFWRAGAEW
CCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
RALAALPIETPAGELPAEAEAGGAALRATLRIVEPRFASRALTLAPKYVEPPEAVKARIA
EEEEEEECCCCCCCCCCCCCCCCHHHEEEHHEECCHHHCCEEEECCCCCCCHHHHHHHHH
ADRKAFADAYARPFEPPAFARPFALPRRAPTSGRYGDQRVLNGEKPSVHYGLDLTGPRGA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCC
PVAAANAGRVVLVRDAYLSGRSVVLWHGAGIYTLYFHLDRVDVRAGQVVRRGQRIGRLGS
CEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCC
TGRSTGPHLHWSVRVDGLLVDPESLVAIDFARGVAPARAPAPAPAVASPAAVPTPTPAPA
CCCCCCCEEEEEEEECEEEECCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVAAPATPIAPAAAGTPAAQP
EECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLAPLLALLAAAAPSLTLAPEAARPGDAVLVRVAGTGREAPRGTLGGRPLTFWRAGAEW
CHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
RALAALPIETPAGELPAEAEAGGAALRATLRIVEPRFASRALTLAPKYVEPPEAVKARIA
EEEEEEECCCCCCCCCCCCCCCCHHHEEEHHEECCHHHCCEEEECCCCCCCHHHHHHHHH
ADRKAFADAYARPFEPPAFARPFALPRRAPTSGRYGDQRVLNGEKPSVHYGLDLTGPRGA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCC
PVAAANAGRVVLVRDAYLSGRSVVLWHGAGIYTLYFHLDRVDVRAGQVVRRGQRIGRLGS
CEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCC
TGRSTGPHLHWSVRVDGLLVDPESLVAIDFARGVAPARAPAPAPAVASPAAVPTPTPAPA
CCCCCCCEEEEEEEECEEEECCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVAAPATPIAPAAAGTPAAQP
EECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]