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The map label for this gene is arnT [H]

Identifier: 220918594

GI number: 220918594

Start: 3916257

End: 3917945

Strand: Reverse

Name: arnT [H]

Synonym: A2cp1_3502

Alternate gene names: 220918594

Gene position: 3917945-3916257 (Counterclockwise)

Preceding gene: 220918595

Following gene: 220918592

Centisome position: 77.9

GC content: 75.9

Gene sequence:

>1689_bases
ATGAGCGCCGCGCCCGGTCGCGCCGGCCCGCCCGGCCTGGGCGGGAGGGTCCAGCTCCTGCTGCTCGCCGCGCTCTGCGC
CTGCACGTTCGTGGTGAACGCGGGCGCGCTCACCGCGAACATCATGGAGTCGCGCAACCTCACCGCCGCGCGCGAGATGC
TCGAGAAGGGCAACTGGCTGCTGCCCACCATGAACGGGGAGCCGCGGCTGGAGAAGCCACCGCTGCCGACCTGGGCCACC
GCCGTCGCCATGGACGCGTTCGGCGAGGAGGACCTCGGGCGGCTGCGCCTGCCCGCCGCGCTGGCCGGCGCGCTGCTGGT
CGCGTTCGCGTGGCTGCTGGCGCGCGAGCTCACCGGCGACCGGCTCGCTCCGTTCCTCGCCGCCGGCACCGCCGCCACCT
CGTTCTACGTGTTCTTCATGGCCCGGGACATCACCTGGGACATCTTCTGCCACGCGTTCATGCTGGGCGCGATCTGGCAG
CTGCACCGCGGCCTGGCGCGCCCCGCCGGCCGGCTCGCGAGCTTCGCCGCCGCCGGCCTGCTCATGGGCCTCTCCTTCCT
CTCGAAGGGCCCGGTCTCCTTCTTCTCGCTCCTGCTCCCGTACCTGGTGGCGCGGACGCTCTCGTCCGGCGTGGCGCCGT
ACCGCGCCGCCTGGCGCCCGCTGCTCCTCACGATCGTCGTCGCGCTCGCCGCGAGCGCGGCGTGGCCGGCCTACGCCTGG
CTGGCCCGGCCCGAGGCCTCCGCGCACGTCGCGCAGAAGGAGTCCACCGCCTGGATCAACCGGAACGTGCGGCCGTTCTG
GCAATACTGGAGCTTCACCGCACAGTCGGGCGTGTGGGCGGTGCTCGCCACCGCCGCGCTGGTGTTCCCGTACGCGCGCC
GCCGCGTGGCGCGGCTCGCCGACTACCGGCTGCTCGCCGCCTGGATCTGGGCCGGCGTGGGGCTCCTGTCGCTCTTCCCG
GAGAAGAAGGAGCGCTACCTGCTCCCGGTGCTGGTGCCCATGGCGCTCCTCACCGCGGTCTACGTGCGCGCGCTGGCCGA
CGCGTTCCGGGCCGGCGCCGAGACCCGCGCCGATCGCGCCCTCGTCCGGGCGAACGCCTGGCTCATGGCGGCGATCGCCG
CCGCGGTCCCGCCTGCGCTGTGGCTCGCGCTCCGCGCCCGCGGCGCCAGCCCCGGGTGGCCGCTGCTCGCGGCGGCGGCG
GCGGTGTTCTGGGCGCTGGCGGCGCTGCTCGCGCACGCCGGGCTCCGCCTCCGGCCGCTGGCGATGTGGGGCGGGATGGT
GGGGATGGTGGCCGCGGCCTGCGTGCTGGTGCTCGGCCAGGTGCCGGCCATCATCACGCGCAACCCCGGCTACCGGCCCT
ACGGCGAGCTCCGCCACCGGGCCGACCTCGCCGGCGTGCCGTTCTTCCGCGCCGGCGACGTGACCGGCAAGTTCATCGAG
GTGATCTGGGCGAGCGGGCGCGAGATCCACGCCTGGGATCCGCGCGAGCGGCCCGAGCCGCCCGTGGCGCCGCCGCTGCT
GCTCATGACCTCGGAGCCGCCGGACCGGGTGCTCGCGCCGGAGCTGGCGCGGCGCTTCCGGGTCGAGGACCTGGGCGTGT
ACGACGGCGCGGTGGACGCCCGCTGGGGCGGCGGCGCGCTCCGGAACCACGTGGTGGTGCTCCGGCCGAGGGAGGCCGGG
GGGCGCTAG

Upstream 100 bases:

>100_bases
TCCGCCGCGATCCGGTGCTGTTCTTCGGGCAGGCCGGCGGCGCGGTGGCCTACTCCCGCAACCTGGTGCTGGGCCTGCGC
GCCCGGCGCCACCCCGCCGC

Downstream 100 bases:

>100_bases
TCCTTCTTGCCGCCCTGGATGACGCCGAAGCGGGGCCGCTTGCGCTCGGGTGGCTTGAGGATCCCCGCCAGCACCGAGGG
CCACGGGAACGCGCAGTCGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSAAPGRAGPPGLGGRVQLLLLAALCACTFVVNAGALTANIMESRNLTAAREMLEKGNWLLPTMNGEPRLEKPPLPTWAT
AVAMDAFGEEDLGRLRLPAALAGALLVAFAWLLARELTGDRLAPFLAAGTAATSFYVFFMARDITWDIFCHAFMLGAIWQ
LHRGLARPAGRLASFAAAGLLMGLSFLSKGPVSFFSLLLPYLVARTLSSGVAPYRAAWRPLLLTIVVALAASAAWPAYAW
LARPEASAHVAQKESTAWINRNVRPFWQYWSFTAQSGVWAVLATAALVFPYARRRVARLADYRLLAAWIWAGVGLLSLFP
EKKERYLLPVLVPMALLTAVYVRALADAFRAGAETRADRALVRANAWLMAAIAAAVPPALWLALRARGASPGWPLLAAAA
AVFWALAALLAHAGLRLRPLAMWGGMVGMVAAACVLVLGQVPAIITRNPGYRPYGELRHRADLAGVPFFRAGDVTGKFIE
VIWASGREIHAWDPRERPEPPVAPPLLLMTSEPPDRVLAPELARRFRVEDLGVYDGAVDARWGGGALRNHVVVLRPREAG
GR

Sequences:

>Translated_562_residues
MSAAPGRAGPPGLGGRVQLLLLAALCACTFVVNAGALTANIMESRNLTAAREMLEKGNWLLPTMNGEPRLEKPPLPTWAT
AVAMDAFGEEDLGRLRLPAALAGALLVAFAWLLARELTGDRLAPFLAAGTAATSFYVFFMARDITWDIFCHAFMLGAIWQ
LHRGLARPAGRLASFAAAGLLMGLSFLSKGPVSFFSLLLPYLVARTLSSGVAPYRAAWRPLLLTIVVALAASAAWPAYAW
LARPEASAHVAQKESTAWINRNVRPFWQYWSFTAQSGVWAVLATAALVFPYARRRVARLADYRLLAAWIWAGVGLLSLFP
EKKERYLLPVLVPMALLTAVYVRALADAFRAGAETRADRALVRANAWLMAAIAAAVPPALWLALRARGASPGWPLLAAAA
AVFWALAALLAHAGLRLRPLAMWGGMVGMVAAACVLVLGQVPAIITRNPGYRPYGELRHRADLAGVPFFRAGDVTGKFIE
VIWASGREIHAWDPRERPEPPVAPPLLLMTSEPPDRVLAPELARRFRVEDLGVYDGAVDARWGGGALRNHVVVLRPREAG
GR
>Mature_561_residues
SAAPGRAGPPGLGGRVQLLLLAALCACTFVVNAGALTANIMESRNLTAAREMLEKGNWLLPTMNGEPRLEKPPLPTWATA
VAMDAFGEEDLGRLRLPAALAGALLVAFAWLLARELTGDRLAPFLAAGTAATSFYVFFMARDITWDIFCHAFMLGAIWQL
HRGLARPAGRLASFAAAGLLMGLSFLSKGPVSFFSLLLPYLVARTLSSGVAPYRAAWRPLLLTIVVALAASAAWPAYAWL
ARPEASAHVAQKESTAWINRNVRPFWQYWSFTAQSGVWAVLATAALVFPYARRRVARLADYRLLAAWIWAGVGLLSLFPE
KKERYLLPVLVPMALLTAVYVRALADAFRAGAETRADRALVRANAWLMAAIAAAVPPALWLALRARGASPGWPLLAAAAA
VFWALAALLAHAGLRLRPLAMWGGMVGMVAAACVLVLGQVPAIITRNPGYRPYGELRHRADLAGVPFFRAGDVTGKFIEV
IWASGREIHAWDPRERPEPPVAPPLLLMTSEPPDRVLAPELARRFRVEDLGVYDGAVDARWGGGALRNHVVVLRPREAGG
R

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 60696; Mature: 60565

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPGRAGPPGLGGRVQLLLLAALCACTFVVNAGALTANIMESRNLTAAREMLEKGNWL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCEE
LPTMNGEPRLEKPPLPTWATAVAMDAFGEEDLGRLRLPAALAGALLVAFAWLLARELTGD
EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLAPFLAAGTAATSFYVFFMARDITWDIFCHAFMLGAIWQLHRGLARPAGRLASFAAAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LMGLSFLSKGPVSFFSLLLPYLVARTLSSGVAPYRAAWRPLLLTIVVALAASAAWPAYAW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LARPEASAHVAQKESTAWINRNVRPFWQYWSFTAQSGVWAVLATAALVFPYARRRVARLA
HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DYRLLAAWIWAGVGLLSLFPEKKERYLLPVLVPMALLTAVYVRALADAFRAGAETRADRA
HHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVRANAWLMAAIAAAVPPALWLALRARGASPGWPLLAAAAAVFWALAALLAHAGLRLRPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHH
AMWGGMVGMVAAACVLVLGQVPAIITRNPGYRPYGELRHRADLAGVPFFRAGDVTGKFIE
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCHHHHH
VIWASGREIHAWDPRERPEPPVAPPLLLMTSEPPDRVLAPELARRFRVEDLGVYDGAVDA
HHHHCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHCCCCCCCCCC
RWGGGALRNHVVVLRPREAGGR
CCCCCHHHCCEEEEECCCCCCC
>Mature Secondary Structure 
SAAPGRAGPPGLGGRVQLLLLAALCACTFVVNAGALTANIMESRNLTAAREMLEKGNWL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCEE
LPTMNGEPRLEKPPLPTWATAVAMDAFGEEDLGRLRLPAALAGALLVAFAWLLARELTGD
EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLAPFLAAGTAATSFYVFFMARDITWDIFCHAFMLGAIWQLHRGLARPAGRLASFAAAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LMGLSFLSKGPVSFFSLLLPYLVARTLSSGVAPYRAAWRPLLLTIVVALAASAAWPAYAW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LARPEASAHVAQKESTAWINRNVRPFWQYWSFTAQSGVWAVLATAALVFPYARRRVARLA
HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DYRLLAAWIWAGVGLLSLFPEKKERYLLPVLVPMALLTAVYVRALADAFRAGAETRADRA
HHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVRANAWLMAAIAAAVPPALWLALRARGASPGWPLLAAAAAVFWALAALLAHAGLRLRPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHH
AMWGGMVGMVAAACVLVLGQVPAIITRNPGYRPYGELRHRADLAGVPFFRAGDVTGKFIE
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCHHHHH
VIWASGREIHAWDPRERPEPPVAPPLLLMTSEPPDRVLAPELARRFRVEDLGVYDGAVDA
HHHHCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHCCCCCCCCCC
RWGGGALRNHVVVLRPREAGGR
CCCCCHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA