Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is 220918563

Identifier: 220918563

GI number: 220918563

Start: 3878384

End: 3878842

Strand: Direct

Name: 220918563

Synonym: A2cp1_3471

Alternate gene names: NA

Gene position: 3878384-3878842 (Clockwise)

Preceding gene: 220918562

Following gene: 220918565

Centisome position: 77.12

GC content: 74.29

Gene sequence:

>459_bases
GTGATCGGCGCGCGCGCCGTGGTCGTGCTCGCCGCCGCGCTGGCGTGTGCCTCTCCCAAGGCACCCGAGCCGGCGCGCCC
CGCCCCGCGCGTCATCGTCGAGACCGCGGCCGGCGCGAGCCACGCCGTCCGGGTCGAGGTCGCGCGCGACGAGGCCTCGC
GCACGCGCGGCCTCATGGAGCGCTCCTCCCTCGCCGCGGACGCCGGGATGCTGTTCGTGTTCGAGGAGAGCGAGCTCCAC
ACGTTCTGGATGCGCAACACGCTCATCCCCCTCGACATGATCTTCGTCGACGACGCCGGCCGCGTGGTCGGCGTGGTGGA
GCGGGCCGAGCCCCTCACCCTGTCGCCCCGCGACGTGGGCGTGCCGAGCCGCTACGTGCTCGAGGTGAACGGCGGCTGGG
CCGCGGCGCACGGCGTGAAGGCCGGCGACCGGGTGCGCTTCGAGAACGTGCTGTATTGA

Upstream 100 bases:

>100_bases
TGGTGCTCGACCCGGCGTTCCTGGCCAGCCTCGACGAGACGACCCGCCAGCGCTACCTGGGCGAGACGCAGTACTCGTCC
TACTGCGTCGTCCCGCGGCA

Downstream 100 bases:

>100_bases
GCGCGGGGCCCGTGACCTCGCGCGCCCGCCTTCGCGGGCTCGCGCGACGTCCCCGCGGGCGCAGGATCGCCGCGCTACCC
CTTCCTCAGCAGCCGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLMERSSLAADAGMLFVFEESELH
TFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVGVPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY

Sequences:

>Translated_152_residues
MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLMERSSLAADAGMLFVFEESELH
TFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVGVPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY
>Mature_152_residues
MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLMERSSLAADAGMLFVFEESELH
TFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVGVPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16293; Mature: 16293

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLME
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHH
RSSLAADAGMLFVFEESELHTFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVG
HHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCC
VPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY
CCCEEEEEECCCEEEECCCCCCCEEEECCCCC
>Mature Secondary Structure
MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLME
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHH
RSSLAADAGMLFVFEESELHTFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVG
HHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCC
VPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY
CCCEEEEEECCCEEEECCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA