| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918563
Identifier: 220918563
GI number: 220918563
Start: 3878384
End: 3878842
Strand: Direct
Name: 220918563
Synonym: A2cp1_3471
Alternate gene names: NA
Gene position: 3878384-3878842 (Clockwise)
Preceding gene: 220918562
Following gene: 220918565
Centisome position: 77.12
GC content: 74.29
Gene sequence:
>459_bases GTGATCGGCGCGCGCGCCGTGGTCGTGCTCGCCGCCGCGCTGGCGTGTGCCTCTCCCAAGGCACCCGAGCCGGCGCGCCC CGCCCCGCGCGTCATCGTCGAGACCGCGGCCGGCGCGAGCCACGCCGTCCGGGTCGAGGTCGCGCGCGACGAGGCCTCGC GCACGCGCGGCCTCATGGAGCGCTCCTCCCTCGCCGCGGACGCCGGGATGCTGTTCGTGTTCGAGGAGAGCGAGCTCCAC ACGTTCTGGATGCGCAACACGCTCATCCCCCTCGACATGATCTTCGTCGACGACGCCGGCCGCGTGGTCGGCGTGGTGGA GCGGGCCGAGCCCCTCACCCTGTCGCCCCGCGACGTGGGCGTGCCGAGCCGCTACGTGCTCGAGGTGAACGGCGGCTGGG CCGCGGCGCACGGCGTGAAGGCCGGCGACCGGGTGCGCTTCGAGAACGTGCTGTATTGA
Upstream 100 bases:
>100_bases TGGTGCTCGACCCGGCGTTCCTGGCCAGCCTCGACGAGACGACCCGCCAGCGCTACCTGGGCGAGACGCAGTACTCGTCC TACTGCGTCGTCCCGCGGCA
Downstream 100 bases:
>100_bases GCGCGGGGCCCGTGACCTCGCGCGCCCGCCTTCGCGGGCTCGCGCGACGTCCCCGCGGGCGCAGGATCGCCGCGCTACCC CTTCCTCAGCAGCCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLMERSSLAADAGMLFVFEESELH TFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVGVPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY
Sequences:
>Translated_152_residues MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLMERSSLAADAGMLFVFEESELH TFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVGVPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY >Mature_152_residues MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLMERSSLAADAGMLFVFEESELH TFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVGVPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16293; Mature: 16293
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLME CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHH RSSLAADAGMLFVFEESELHTFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVG HHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCC VPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY CCCEEEEEECCCEEEECCCCCCCEEEECCCCC >Mature Secondary Structure MIGARAVVVLAAALACASPKAPEPARPAPRVIVETAAGASHAVRVEVARDEASRTRGLME CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHH RSSLAADAGMLFVFEESELHTFWMRNTLIPLDMIFVDDAGRVVGVVERAEPLTLSPRDVG HHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCC VPSRYVLEVNGGWAAAHGVKAGDRVRFENVLY CCCEEEEEECCCEEEECCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA