| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220918565
Identifier: 220918565
GI number: 220918565
Start: 3879348
End: 3881609
Strand: Direct
Name: 220918565
Synonym: A2cp1_3473
Alternate gene names: NA
Gene position: 3879348-3881609 (Clockwise)
Preceding gene: 220918563
Following gene: 220918567
Centisome position: 77.13
GC content: 83.42
Gene sequence:
>2262_bases ATGCTCGATCTCCTCCAGGCGCTGATCCGCCTGCGCGCGGTGCGCGGCGCCGCGGCGCTGCTCGCGGCGCTGGGGCTGGC GAGCGGCTCGCTCCCGCTGCTCGACGCGCCGGGGTACGAGCTGGGCGAGGCCGGCGCGCTGCTCGCGGCGCTCGTCCTCG GTCCGGCGCTCGGGTTCGCGGCGGGGCGCGCCGCCCGGGCCCGCCCGGAGCCGTCGCCCGCGGCCGCTGCCGCCGCGGCG GGCGCGGTCGCGGCGGGCCTGCTCGGGCTGCTGCTCGCGGGCGCCCTGCTCCGGGCCGCGGTCGGGCCGTGCAGCGCCCT CGCCGCCGCCGGCTTCTTCCCGCTGCTCGCCGTCCCGTCGGCGCTGCTCGCCGCCGCCCTGGGCGCCGCCGCCGCGTTCC TGGCCCGCGGCCGCGCCGGCCCGGCGGCGGCCCTGTACGCGCTCGTCGTGCTGGCGGCGCTGGGCGTGGCGCTCCGGGGC GCGTACGCCGGCCCGGCCGCGTTCGCCTGGAGCCCGCTGCTCGGCGCCTGGCCCGGCCCGCTCTACGACGAGGCGCTCCG GGTGGACGGGCGGGTGGTGCTCGGCGCCCTCGAGGCCACCGCGCTCGCCGCCGCGGTGGCCGCGGCGGCCGAGCTCGCGC TCCGGCCCCGGCGCACGCGGCGCCGGCTGGCCGGGGTCCTGCTCGCGCTCGCCGCCGCGGCGGGTGCGGTCGCCGCCGCG CGGGGCGCCCGCGCCGCGCTCGGGCTGGACGGCTCGCGCGAGACGGTGGCGCGCGCGCTGGGCGGCGTCCGCGAGGGCCC GCGCTGCACGCTCGTGCTCCCCTCGGAGAAGCCGGAGGCGGCCGCCGCCGAGCTGCTGGCGGAGTGCGAATTCCACGTGG CCGAGGTGGCGCGCGCGCTCGGGATCGAGCGGCCGCCGCGGGTGACGGTGTACGTGTACCGGAGCGCCGAGGAGAAGCGG CGCCTGGTGGGCGCGGCCGGCACCGACTTCACCAAGCCCTGGCGCGCCGAGATCCACCTCGGCGACGCGCCGCTCCCGCA CCCGGTGCTGCGCCACGAGGTGGTCCACGCGGTCGCCTCGGCGCTCGCGCCCGGCCCGCTGCGCGTCCCGGCGCGGGCCG GCGTGCTGGTGTCGGCGGGCCTGGTGGAGGGGCTGGCGGTGGCGCTCGAGGTGCCGCGCGGCGCCTGGACGGTGCACGAG TGGTCCCGGGCGGCGCGCGACCAGGGCCGGCTCCCGGACCTGCCGGCGATCGTGGGCCCGGGCGGCTTCTGGAGCCAGGC GCCGGCGCGCGCGTACACCGCGGCGGGGAGCTTCCTCGCGTTCCTGCTCGCCCGGCACGGGCCGGCGCCGGTGGCGCGCG CCTACGCCACCGGCGACGTCGCCGCCGCCCTGGGCCGCCCGCTGCCGGCGCTGGTGGACGAGTGGCAGCGCTTCCTCGAC GGCGTGGCCGTGCCGGAGGGGCTCCGGCGCGAGGCCGAGGCGCGGCTCGCGCGCGGCAGCCTGTTCACGCGCCGCTGCGC GCGCGAGGCGGCGGCGCTGGAGGCCGGCGCCGGGGCCGCGGCGGCCGCCGGGCGGACCGAGGAGGCCTGCGACCTGTACC GGCGCGCCGGCGCGCTGACCGGCTCGCCCTGGGCCGCGAAGGCGCGCGGCGACGCGCGGGCACGGTCCGGCGACCTCGCG GGCGCGCTCGCGGCGTACGCGGAGGCCCGGGCCCAGGGCGAGGGCCAGGGTGCGCTGCAGGGCGCGCTCGCCGCCGCCGA GGCGGACGTCCGCTGGCGGCAGGGCGACGCCGCCGCGGCCGCGGCCGGGTGGGCGGAGGCGCTCGGCGCGGGCCCGGACC GCGGGGAGGCGCGGCTCCTCTCGGCCAAGCTCGCGGCGCTGCGCGACCCGCGGCTCGCCGCCGCCGCCCTGCCCTACCTG CTCGGCCTCGGCGACGCGACGCTCGCGCTCGCCCGCACCGCGGCGGTGGACGCGCCGCTCGCGGCGTACCTGGTCGGGCG CGCGCACGGGATCCGCGGCGAGGCGGCGCCGGCGGCTGCCCTGCTCGCCCGCGCCGCGGCGGGCGGCCTCCCGCCCGAGC TCGCGGCCGAGGCGCGCGCGGCCGGCGGCGAGGCGGCCTGCGCCGCCGGCGAGATCGGCGCGGGCGAGGAGGCGCTCCGG GCGGCGCTGGCGCGCGCCGCCTCGGAGGCGGAGCGCGAGCGCCTGGAGGCGGGGCTGCGCCGCTGCGCGTTCGTGGCCGC GGATCGATCCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases ATGGGCGCGCGCGCGTGCTCGCGGTTCTCCGGCATCGCGCGCCATGTTATCCCGGGGCTGGCGCGGCCGGTAGCGGCGGC GCCGATATCGGCGGGACGCG
Downstream 100 bases:
>100_bases CGCGCAGGCGCGATCAGACGCCGCCGCGCAGGCGGTCGATGGCGGCCTTCGGGTTCTTCACACCTTTCTTCAGCAGCCAC CAGCCGACCTTCATCCCACC
Product: vgr-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MLDLLQALIRLRAVRGAAALLAALGLASGSLPLLDAPGYELGEAGALLAALVLGPALGFAAGRAARARPEPSPAAAAAAA GAVAAGLLGLLLAGALLRAAVGPCSALAAAGFFPLLAVPSALLAAALGAAAAFLARGRAGPAAALYALVVLAALGVALRG AYAGPAAFAWSPLLGAWPGPLYDEALRVDGRVVLGALEATALAAAVAAAAELALRPRRTRRRLAGVLLALAAAAGAVAAA RGARAALGLDGSRETVARALGGVREGPRCTLVLPSEKPEAAAAELLAECEFHVAEVARALGIERPPRVTVYVYRSAEEKR RLVGAAGTDFTKPWRAEIHLGDAPLPHPVLRHEVVHAVASALAPGPLRVPARAGVLVSAGLVEGLAVALEVPRGAWTVHE WSRAARDQGRLPDLPAIVGPGGFWSQAPARAYTAAGSFLAFLLARHGPAPVARAYATGDVAAALGRPLPALVDEWQRFLD GVAVPEGLRREAEARLARGSLFTRRCAREAAALEAGAGAAAAAGRTEEACDLYRRAGALTGSPWAAKARGDARARSGDLA GALAAYAEARAQGEGQGALQGALAAAEADVRWRQGDAAAAAAGWAEALGAGPDRGEARLLSAKLAALRDPRLAAAALPYL LGLGDATLALARTAAVDAPLAAYLVGRAHGIRGEAAPAAALLARAAAGGLPPELAAEARAAGGEAACAAGEIGAGEEALR AALARAASEAERERLEAGLRRCAFVAADRSAAR
Sequences:
>Translated_753_residues MLDLLQALIRLRAVRGAAALLAALGLASGSLPLLDAPGYELGEAGALLAALVLGPALGFAAGRAARARPEPSPAAAAAAA GAVAAGLLGLLLAGALLRAAVGPCSALAAAGFFPLLAVPSALLAAALGAAAAFLARGRAGPAAALYALVVLAALGVALRG AYAGPAAFAWSPLLGAWPGPLYDEALRVDGRVVLGALEATALAAAVAAAAELALRPRRTRRRLAGVLLALAAAAGAVAAA RGARAALGLDGSRETVARALGGVREGPRCTLVLPSEKPEAAAAELLAECEFHVAEVARALGIERPPRVTVYVYRSAEEKR RLVGAAGTDFTKPWRAEIHLGDAPLPHPVLRHEVVHAVASALAPGPLRVPARAGVLVSAGLVEGLAVALEVPRGAWTVHE WSRAARDQGRLPDLPAIVGPGGFWSQAPARAYTAAGSFLAFLLARHGPAPVARAYATGDVAAALGRPLPALVDEWQRFLD GVAVPEGLRREAEARLARGSLFTRRCAREAAALEAGAGAAAAAGRTEEACDLYRRAGALTGSPWAAKARGDARARSGDLA GALAAYAEARAQGEGQGALQGALAAAEADVRWRQGDAAAAAAGWAEALGAGPDRGEARLLSAKLAALRDPRLAAAALPYL LGLGDATLALARTAAVDAPLAAYLVGRAHGIRGEAAPAAALLARAAAGGLPPELAAEARAAGGEAACAAGEIGAGEEALR AALARAASEAERERLEAGLRRCAFVAADRSAAR >Mature_753_residues MLDLLQALIRLRAVRGAAALLAALGLASGSLPLLDAPGYELGEAGALLAALVLGPALGFAAGRAARARPEPSPAAAAAAA GAVAAGLLGLLLAGALLRAAVGPCSALAAAGFFPLLAVPSALLAAALGAAAAFLARGRAGPAAALYALVVLAALGVALRG AYAGPAAFAWSPLLGAWPGPLYDEALRVDGRVVLGALEATALAAAVAAAAELALRPRRTRRRLAGVLLALAAAAGAVAAA RGARAALGLDGSRETVARALGGVREGPRCTLVLPSEKPEAAAAELLAECEFHVAEVARALGIERPPRVTVYVYRSAEEKR RLVGAAGTDFTKPWRAEIHLGDAPLPHPVLRHEVVHAVASALAPGPLRVPARAGVLVSAGLVEGLAVALEVPRGAWTVHE WSRAARDQGRLPDLPAIVGPGGFWSQAPARAYTAAGSFLAFLLARHGPAPVARAYATGDVAAALGRPLPALVDEWQRFLD GVAVPEGLRREAEARLARGSLFTRRCAREAAALEAGAGAAAAAGRTEEACDLYRRAGALTGSPWAAKARGDARARSGDLA GALAAYAEARAQGEGQGALQGALAAAEADVRWRQGDAAAAAAGWAEALGAGPDRGEARLLSAKLAALRDPRLAAAALPYL LGLGDATLALARTAAVDAPLAAYLVGRAHGIRGEAAPAAALLARAAAGGLPPELAAEARAAGGEAACAAGEIGAGEEALR AALARAASEAERERLEAGLRRCAFVAADRSAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75299; Mature: 75299
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLLQALIRLRAVRGAAALLAALGLASGSLPLLDAPGYELGEAGALLAALVLGPALGFA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH AGRAARARPEPSPAAAAAAAGAVAAGLLGLLLAGALLRAAVGPCSALAAAGFFPLLAVPS HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALLAAALGAAAAFLARGRAGPAAALYALVVLAALGVALRGAYAGPAAFAWSPLLGAWPGP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCC LYDEALRVDGRVVLGALEATALAAAVAAAAELALRPRRTRRRLAGVLLALAAAAGAVAAA HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RGARAALGLDGSRETVARALGGVREGPRCTLVLPSEKPEAAAAELLAECEFHVAEVARAL CCCCCEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH GIERPPRVTVYVYRSAEEKRRLVGAAGTDFTKPWRAEIHLGDAPLPHPVLRHEVVHAVAS CCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH ALAPGPLRVPARAGVLVSAGLVEGLAVALEVPRGAWTVHEWSRAARDQGRLPDLPAIVGP HCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCEECC GGFWSQAPARAYTAAGSFLAFLLARHGPAPVARAYATGDVAAALGRPLPALVDEWQRFLD CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GVAVPEGLRREAEARLARGSLFTRRCAREAAALEAGAGAAAAAGRTEEACDLYRRAGALT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCC GSPWAAKARGDARARSGDLAGALAAYAEARAQGEGQGALQGALAAAEADVRWRQGDAAAA CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH AAGWAEALGAGPDRGEARLLSAKLAALRDPRLAAAALPYLLGLGDATLALARTAAVDAPL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH AAYLVGRAHGIRGEAAPAAALLARAAAGGLPPELAAEARAAGGEAACAAGEIGAGEEALR HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCCCCCCHHHHH AALARAASEAERERLEAGLRRCAFVAADRSAAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLDLLQALIRLRAVRGAAALLAALGLASGSLPLLDAPGYELGEAGALLAALVLGPALGFA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH AGRAARARPEPSPAAAAAAAGAVAAGLLGLLLAGALLRAAVGPCSALAAAGFFPLLAVPS HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALLAAALGAAAAFLARGRAGPAAALYALVVLAALGVALRGAYAGPAAFAWSPLLGAWPGP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCC LYDEALRVDGRVVLGALEATALAAAVAAAAELALRPRRTRRRLAGVLLALAAAAGAVAAA HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RGARAALGLDGSRETVARALGGVREGPRCTLVLPSEKPEAAAAELLAECEFHVAEVARAL CCCCCEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH GIERPPRVTVYVYRSAEEKRRLVGAAGTDFTKPWRAEIHLGDAPLPHPVLRHEVVHAVAS CCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH ALAPGPLRVPARAGVLVSAGLVEGLAVALEVPRGAWTVHEWSRAARDQGRLPDLPAIVGP HCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCEECC GGFWSQAPARAYTAAGSFLAFLLARHGPAPVARAYATGDVAAALGRPLPALVDEWQRFLD CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GVAVPEGLRREAEARLARGSLFTRRCAREAAALEAGAGAAAAAGRTEEACDLYRRAGALT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCC GSPWAAKARGDARARSGDLAGALAAYAEARAQGEGQGALQGALAAAEADVRWRQGDAAAA CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH AAGWAEALGAGPDRGEARLLSAKLAALRDPRLAAAALPYLLGLGDATLALARTAAVDAPL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH AAYLVGRAHGIRGEAAPAAALLARAAAGGLPPELAAEARAAGGEAACAAGEIGAGEEALR HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCCCCCCHHHHH AALARAASEAERERLEAGLRRCAFVAADRSAAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA